RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 AUP1Q9Y679 476 aa11.9□□□□□ -0.5
CDR2-204ENST00000564542 A8MXK9 166 aa11.89□□□□□ -0.51
CDR2-204ENST00000564542 CST2P09228 141 aa11.89□□□□□ -0.51
CDR2-204ENST00000564542 ZNF12P17014 697 aa11.89□□□□□ -0.51
CDR2-204ENST00000564542 ARHGDIAP52565 204 aa11.89□□□□□ -0.51
CDR2-204ENST00000564542 TAS2R41P59536 307 aa11.89□□□□□ -0.51
CDR2-204ENST00000564542 TNFAIP6P98066 277 aaPredicted RBP11.89□□□□□ -0.51
CDR2-204ENST00000564542 CDK5R2Q13319 367 aa11.89□□□□□ -0.51
CDR2-204ENST00000564542 TMEM155Q4W5P6 130 aa11.89□□□□□ -0.51
CDR2-204ENST00000564542 MTX3Q5HYI7 312 aa11.89□□□□□ -0.51
CDR2-204ENST00000564542 KLF17Q5JT82 389 aaPredicted RBP11.89□□□□□ -0.51
CDR2-204ENST00000564542 SLC25A47Q6Q0C1 308 aa11.89□□□□□ -0.51
CDR2-204ENST00000564542 CCDC80Q76M96 950 aa11.89□□□□□ -0.51
CDR2-204ENST00000564542 ZER1Q7Z7L7 766 aa11.89□□□□□ -0.51
CDR2-204ENST00000564542 NKAIN4Q8IVV8 208 aa11.89□□□□□ -0.51
CDR2-204ENST00000564542 TMEM239Q8WW34 195 aa11.89□□□□□ -0.51
CDR2-204ENST00000564542 C1orf147Q96MC9 270 aaPredicted RBP11.89□□□□□ -0.51
CDR2-204ENST00000564542 DUX5Q96PT3 197 aa11.89□□□□□ -0.51
CDR2-204ENST00000564542 ALG12Q9BV10 488 aa11.89□□□□□ -0.51
CDR2-204ENST00000564542 MRI1Q9BV20 369 aa11.89□□□□□ -0.51
CDR2-204ENST00000564542 C1QTNF5Q9BXJ0 243 aa11.89□□□□□ -0.51
CDR2-204ENST00000564542 WNT5BQ9H1J7 359 aa11.89□□□□□ -0.51
CDR2-204ENST00000564542 TXNIPQ9H3M7 391 aa11.89□□□□□ -0.51
CDR2-204ENST00000564542 UNKLQ9H9P5 680 aaKnown RBP11.89□□□□□ -0.51
CDR2-204ENST00000564542 ELOVL3Q9HB03 270 aa11.89□□□□□ -0.51
CDR2-204ENST00000564542 PATZ1Q9HBE1 687 aaKnown RBP11.89□□□□□ -0.51
CDR2-204ENST00000564542 TMEM106BQ9NUM4 274 aa11.89□□□□□ -0.51
CDR2-204ENST00000564542 DCAF16Q9NXF7 216 aa11.89□□□□□ -0.51
CDR2-204ENST00000564542 INSIG2Q9Y5U4 225 aa11.89□□□□□ -0.51
CDR2-204ENST00000564542 TGP01266 2768 aa11.89□□□□□ -0.51
CDR2-204ENST00000564542 TRAPPC2LH3BP13 241 aa11.88□□□□□ -0.51
CDR2-204ENST00000564542 TIMM8AO60220 97 aaPredicted RBP11.88□□□□□ -0.51
CDR2-204ENST00000564542 OR5F1O95221 314 aa11.88□□□□□ -0.51
CDR2-204ENST00000564542 NGFP01138 241 aa11.88□□□□□ -0.51
CDR2-204ENST00000564542 RNASE1P07998 156 aaKnown RBP11.88□□□□□ -0.51
CDR2-204ENST00000564542 SBK2P0C263 348 aa11.88□□□□□ -0.51
CDR2-204ENST00000564542 TNFRSF1AP19438 455 aa11.88□□□□□ -0.51
CDR2-204ENST00000564542 LAP3P28838 519 aa11.88□□□□□ -0.51
CDR2-204ENST00000564542 SLC6A9P48067 706 aa11.88□□□□□ -0.51
CDR2-204ENST00000564542 PCBD1P61457 104 aa11.88□□□□□ -0.51
CDR2-204ENST00000564542 SEC61A1P61619 476 aaKnown RBP11.88□□□□□ -0.51
CDR2-204ENST00000564542 BTG1P62324 171 aa11.88□□□□□ -0.51
CDR2-204ENST00000564542 IL13RA1P78552 427 aa11.88□□□□□ -0.51
CDR2-204ENST00000564542 BAMBIQ13145 260 aa11.88□□□□□ -0.51
CDR2-204ENST00000564542 HNRNPA0Q13151 305 aaKnown RBP11.88□□□□□ -0.51
CDR2-204ENST00000564542 TOP3AQ13472 1001 aaPredicted RBP11.88□□□□□ -0.51
CDR2-204ENST00000564542 NFYCQ13952 458 aa11.88□□□□□ -0.51
CDR2-204ENST00000564542 TAF11Q15544 211 aa11.88□□□□□ -0.51
CDR2-204ENST00000564542 VMACQ2NL98 169 aa11.88□□□□□ -0.51
CDR2-204ENST00000564542 ARL9Q6T311 187 aa11.88□□□□□ -0.51
CDR2-204ENST00000564542 FOXL2NBQ6ZUU3 175 aa11.88□□□□□ -0.51
CDR2-204ENST00000564542 ZNF283Q8N7M2 679 aa11.88□□□□□ -0.51
CDR2-204ENST00000564542 OR10A6Q8NH74 314 aa11.88□□□□□ -0.51
CDR2-204ENST00000564542 FNDC8Q8TC99 324 aa11.88□□□□□ -0.51
CDR2-204ENST00000564542 STON2Q8WXE9 905 aa11.88□□□□□ -0.51
CDR2-204ENST00000564542 C4orf45Q96LM5 186 aa11.88□□□□□ -0.51
CDR2-204ENST00000564542 ZNF48Q96MX3 618 aaPredicted RBP11.88□□□□□ -0.51
CDR2-204ENST00000564542 DCLRE1CQ96SD1 692 aaKnown RBP11.88□□□□□ -0.51
CDR2-204ENST00000564542 HIF3AQ9Y2N7 669 aa11.88□□□□□ -0.51
CDR2-204ENST00000564542 SH3GLB1Q9Y371 365 aa11.88□□□□□ -0.51
CDR2-204ENST00000564542 MED31Q9Y3C7 131 aa11.88□□□□□ -0.51
CDR2-204ENST00000564542 TIMM10BQ9Y5J6 103 aa11.88□□□□□ -0.51
CDR2-204ENST00000564542 F5H0A9 414 aaPredicted RBP11.87□□□□□ -0.51
CDR2-204ENST00000564542 CLDN34H7C241 214 aa11.87□□□□□ -0.51
CDR2-204ENST00000564542 GSTM3P21266 225 aa11.87□□□□□ -0.51
CDR2-204ENST00000564542 TNFSF4P23510 183 aa11.87□□□□□ -0.51
CDR2-204ENST00000564542 GZMMP51124 257 aa11.87□□□□□ -0.51
CDR2-204ENST00000564542 PSG7Q13046 419 aa11.87□□□□□ -0.51
CDR2-204ENST00000564542 PDLIM3Q53GG5 364 aaPredicted RBP11.87□□□□□ -0.51
CDR2-204ENST00000564542 ALG10Q5BKT4 473 aa11.87□□□□□ -0.51
CDR2-204ENST00000564542 FAM205BPQ63HN1 556 aa11.87□□□□□ -0.51
CDR2-204ENST00000564542 ZNF774Q6NX45 483 aa11.87□□□□□ -0.51
CDR2-204ENST00000564542 TREML4Q6UXN2 200 aa11.87□□□□□ -0.51
CDR2-204ENST00000564542 LRRC28Q86X40 367 aaPredicted RBP11.87□□□□□ -0.51
CDR2-204ENST00000564542 BCL6BQ8N143 479 aaPredicted RBP11.87□□□□□ -0.51
CDR2-204ENST00000564542 NPEPL1Q8NDH3 523 aa11.87□□□□□ -0.51
CDR2-204ENST00000564542 TSPEARQ8WU66 669 aa11.87□□□□□ -0.51
CDR2-204ENST00000564542 SLC25A28Q96A46 364 aa11.87□□□□□ -0.51
CDR2-204ENST00000564542 SAMD8Q96LT4 415 aa11.87□□□□□ -0.51
CDR2-204ENST00000564542 RBP7Q96R05 134 aa11.87□□□□□ -0.51
CDR2-204ENST00000564542 SIGLEC11Q96RL6 698 aa11.87□□□□□ -0.51
CDR2-204ENST00000564542 EGFL7Q9UHF1 273 aa11.87□□□□□ -0.51
CDR2-204ENST00000564542 RIMS3Q9UJD0 308 aa11.87□□□□□ -0.51
CDR2-204ENST00000564542 BAG5Q9UL15 447 aa11.87□□□□□ -0.51
CDR2-204ENST00000564542 NDRG4Q9ULP0 352 aaKnown RBP11.87□□□□□ -0.51
CDR2-204ENST00000564542 POM121CA8CG34 1229 aa11.86□□□□□ -0.51
CDR2-204ENST00000564542 ABHD16AO95870 558 aa11.86□□□□□ -0.51
CDR2-204ENST00000564542 THRBP10828 461 aa11.86□□□□□ -0.51
CDR2-204ENST00000564542 TNFRSF1BP20333 461 aa11.86□□□□□ -0.51
CDR2-204ENST00000564542 MSR1P21757 451 aa11.86□□□□□ -0.51
CDR2-204ENST00000564542 TUBG1P23258 451 aa11.86□□□□□ -0.51
CDR2-204ENST00000564542 GUCA1AP43080 201 aaPredicted RBP11.86□□□□□ -0.51
CDR2-204ENST00000564542 RPL27P61353 136 aaKnown RBP11.86□□□□□ -0.51
CDR2-204ENST00000564542 PIN1Q13526 163 aaPredicted RBP11.86□□□□□ -0.51
CDR2-204ENST00000564542 ENDOGQ14249 297 aaKnown RBP11.86□□□□□ -0.51
CDR2-204ENST00000564542 LAPTM4AQ15012 233 aa11.86□□□□□ -0.51
CDR2-204ENST00000564542 ZMYND11Q15326 602 aa11.86□□□□□ -0.51
CDR2-204ENST00000564542 ESCO2Q56NI9 601 aa11.86□□□□□ -0.51
CDR2-204ENST00000564542 SYT9Q86SS6 491 aa11.86□□□□□ -0.51
CDR2-204ENST00000564542 CLDN22Q8N7P3 220 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms