RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 KITLGP21583 273 aa2.32□□□□□ -2.04
UBR1-205ENST00000564540 OTX1P32242 354 aaPredicted RBP2.32□□□□□ -2.04
UBR1-205ENST00000564540 NUP62P37198 522 aaPredicted RBP2.32□□□□□ -2.04
UBR1-205ENST00000564540 PPIL2Q13356 520 aa2.32□□□□□ -2.04
UBR1-205ENST00000564540 MRPL23Q16540 153 aaKnown RBP2.32□□□□□ -2.04
UBR1-205ENST00000564540 DUSP7Q16829 419 aa2.32□□□□□ -2.04
UBR1-205ENST00000564540 KLHL38Q2WGJ6 581 aa2.32□□□□□ -2.04
UBR1-205ENST00000564540 VAX1Q5SQQ9 334 aa2.32□□□□□ -2.04
UBR1-205ENST00000564540 PRR9Q5T870 116 aa2.32□□□□□ -2.04
UBR1-205ENST00000564540 SLC8B1Q6J4K2 584 aa2.32□□□□□ -2.04
UBR1-205ENST00000564540 NEGR1Q7Z3B1 354 aa2.32□□□□□ -2.04
UBR1-205ENST00000564540 MMAAQ8IVH4 418 aaKnown RBP2.32□□□□□ -2.04
UBR1-205ENST00000564540 CCDC50Q8IVM0 306 aa2.32□□□□□ -2.04
UBR1-205ENST00000564540 IQCF2Q8IXL9 164 aa2.32□□□□□ -2.04
UBR1-205ENST00000564540 UBALD2Q8IYN6 164 aa2.32□□□□□ -2.04
UBR1-205ENST00000564540 PQLC3Q8N755 202 aa2.32□□□□□ -2.04
UBR1-205ENST00000564540 OR7G2Q8NG99 324 aa2.32□□□□□ -2.04
UBR1-205ENST00000564540 OR8K3Q8NH51 312 aa2.32□□□□□ -2.04
UBR1-205ENST00000564540 OR52P1PQ8NH57 321 aa2.32□□□□□ -2.04
UBR1-205ENST00000564540 ZNF461Q8TAF7 563 aa2.32□□□□□ -2.04
UBR1-205ENST00000564540 GPX8Q8TED1 209 aa2.32□□□□□ -2.04
UBR1-205ENST00000564540 MAIP1Q8WWC4 291 aa2.32□□□□□ -2.04
UBR1-205ENST00000564540 UFD1Q92890 307 aa2.32□□□□□ -2.04
UBR1-205ENST00000564540 SMARCD2Q92925 531 aa2.32□□□□□ -2.04
UBR1-205ENST00000564540 TMIGD2Q96BF3 282 aa2.32□□□□□ -2.04
UBR1-205ENST00000564540 EFHD2Q96C19 240 aaPredicted RBP2.32□□□□□ -2.04
UBR1-205ENST00000564540 C19orf60Q96EN9 201 aa2.32□□□□□ -2.04
UBR1-205ENST00000564540 RHOXF2Q9BQY4 288 aa2.32□□□□□ -2.04
UBR1-205ENST00000564540 C20orf24Q9BUV8 137 aa2.32□□□□□ -2.04
UBR1-205ENST00000564540 TEKT3Q9BXF9 490 aa2.32□□□□□ -2.04
UBR1-205ENST00000564540 MRPL37Q9BZE1 423 aaKnown RBP2.32□□□□□ -2.04
UBR1-205ENST00000564540 BLZF1Q9H2G9 400 aa2.32□□□□□ -2.04
UBR1-205ENST00000564540 MRPS30Q9NP92 439 aaKnown RBP2.32□□□□□ -2.04
UBR1-205ENST00000564540 ZMAT5Q9UDW3 170 aaKnown RBP2.32□□□□□ -2.04
UBR1-205ENST00000564540 RHBDD3Q9Y3P4 386 aa2.32□□□□□ -2.04
UBR1-205ENST00000564540 TUBGCP6Q96RT7 1819 aa2.32□□□□□ -2.04
UBR1-205ENST00000564540 IGHV5-51A0A0C4DH38 117 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 IGHV3-66A0A0C4DH42 116 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 TRBV11-1A0A0K0K1C0 115 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 A0A1B0GVX0 72 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 SMCO3A2RU48 225 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 INS-IGF2F8WCM5 200 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 H3BNH8 94 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 NDUFS8O00217 210 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 TRDMT1O14717 391 aaKnown RBP2.31□□□□□ -2.04
UBR1-205ENST00000564540 OR2J3O76001 311 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 ERCC1P07992 297 aaPredicted RBP2.31□□□□□ -2.04
UBR1-205ENST00000564540 CCNB1P14635 433 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 ZNF43P17038 809 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 PRKACAP17612 351 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 GNA11P29992 359 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 SSR1P43307 286 aaKnown RBP2.31□□□□□ -2.04
UBR1-205ENST00000564540 ACLYP53396 1101 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 DAOAP59103 153 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 ZNF77Q15935 545 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 PRSS8Q16651 343 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 TTLL9Q3SXZ7 439 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 ZBED5Q49AG3 693 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 COX19Q49B96 90 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 FBXW9Q5XUX1 488 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 PLCXD3Q63HM9 321 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 SASS6Q6UVJ0 657 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 LINC00173Q6ZV60 143 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 NIPA1Q7RTP0 329 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 ZADH2Q8N4Q0 377 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 VN1R2Q8NFZ6 395 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 OR52H1Q8NGJ2 320 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 ACMSDQ8TDX5 336 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 UBE2E3Q969T4 207 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 LRRC39Q96DD0 335 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 OR10C1Q96KK4 312 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 PANX2Q96RD6 677 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 OSBPL11Q9BXB4 747 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 NEUROG2Q9H2A3 272 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 SPNS1Q9H2V7 528 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 RGCCQ9H4X1 137 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 C8orf33Q9H7E9 229 aaPredicted RBP2.31□□□□□ -2.04
UBR1-205ENST00000564540 LYRM4Q9HD34 91 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 AGPAT3Q9NRZ7 376 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 MRPL22Q9NWU5 206 aaKnown RBP2.31□□□□□ -2.04
UBR1-205ENST00000564540 GIN1Q9NXP7 522 aa2.31□□□□□ -2.04
UBR1-205ENST00000564540 EIF4G1Q04637 1599 aaKnown RBP2.31□□□□□ -2.04
UBR1-205ENST00000564540 ZNF233A6NK53 670 aa2.3□□□□□ -2.04
UBR1-205ENST00000564540 RPL36A-HNRNPH2H7BZ11 118 aa2.3□□□□□ -2.04
UBR1-205ENST00000564540 ZNF701M0R085 212 aaPredicted RBP2.3□□□□□ -2.04
UBR1-205ENST00000564540 XKRYO14609 159 aa2.3□□□□□ -2.04
UBR1-205ENST00000564540 NVLO15381 856 aaKnown RBP2.3□□□□□ -2.04
UBR1-205ENST00000564540 CLOCKO15516 846 aa2.3□□□□□ -2.04
UBR1-205ENST00000564540 SRP72O76094 671 aaKnown RBP2.3□□□□□ -2.04
UBR1-205ENST00000564540 NPPAP01160 153 aa2.3□□□□□ -2.04
UBR1-205ENST00000564540 SERPIND1P05546 499 aa2.3□□□□□ -2.04
UBR1-205ENST00000564540 IVLP07476 585 aa2.3□□□□□ -2.04
UBR1-205ENST00000564540 UBTFL6P0CB48 400 aaPredicted RBP2.3□□□□□ -2.04
UBR1-205ENST00000564540 PRPS2P11908 318 aa2.3□□□□□ -2.04
UBR1-205ENST00000564540 PSMC3P17980 439 aa2.3□□□□□ -2.04
UBR1-205ENST00000564540 GSTM3P21266 225 aa2.3□□□□□ -2.04
UBR1-205ENST00000564540 CD9P21926 228 aa2.3□□□□□ -2.04
UBR1-205ENST00000564540 STOMP27105 288 aa2.3□□□□□ -2.04
UBR1-205ENST00000564540 BCAP31P51572 246 aa2.3□□□□□ -2.04
UBR1-205ENST00000564540 NCBP2P52298 156 aaKnown RBP eCLIP2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms