RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 C4orf36Q96KX1 117 aa8.64□□□□□ -1.03
UBFD1-203ENST00000564106 TSSK2Q96PF2 358 aa8.64□□□□□ -1.03
UBFD1-203ENST00000564106 MRPL13Q9BYD1 178 aaKnown RBP8.64□□□□□ -1.03
UBFD1-203ENST00000564106 OR51E2Q9H255 320 aa8.64□□□□□ -1.03
UBFD1-203ENST00000564106 NPDC1Q9NQX5 325 aaPredicted RBP8.64□□□□□ -1.03
UBFD1-203ENST00000564106 MED29Q9NX70 200 aa8.64□□□□□ -1.03
UBFD1-203ENST00000564106 CCDC59Q9P031 241 aaKnown RBP8.64□□□□□ -1.03
UBFD1-203ENST00000564106 KLHL13Q9P2N7 655 aa8.64□□□□□ -1.03
UBFD1-203ENST00000564106 RCE1Q9Y256 329 aa8.64□□□□□ -1.03
UBFD1-203ENST00000564106 KLF2Q9Y5W3 355 aaPredicted RBP8.64□□□□□ -1.03
UBFD1-203ENST00000564106 A3GALT2U3KPV4 340 aa8.64□□□□□ -1.03
UBFD1-203ENST00000564106 SPG11Q96JI7 2443 aa8.64□□□□□ -1.03
UBFD1-203ENST00000564106 TRDV1A0A1B0GX56 115 aa8.63□□□□□ -1.03
UBFD1-203ENST00000564106 SLC35F4A4IF30 521 aa8.63□□□□□ -1.03
UBFD1-203ENST00000564106 NKX2-6A6NCS4 301 aa8.63□□□□□ -1.03
UBFD1-203ENST00000564106 METTL15A6NJ78 407 aa8.63□□□□□ -1.03
UBFD1-203ENST00000564106 DCTN6O00399 190 aa8.63□□□□□ -1.03
UBFD1-203ENST00000564106 GPR171O14626 319 aa8.63□□□□□ -1.03
UBFD1-203ENST00000564106 TFECO14948 347 aaPredicted RBP8.63□□□□□ -1.03
UBFD1-203ENST00000564106 GPRIN2O60269 458 aa8.63□□□□□ -1.03
UBFD1-203ENST00000564106 CLPXO76031 633 aa8.63□□□□□ -1.03
UBFD1-203ENST00000564106 SYNGR4O95473 234 aa8.63□□□□□ -1.03
UBFD1-203ENST00000564106 IL1AP01583 271 aa8.63□□□□□ -1.03
UBFD1-203ENST00000564106 OPN1LWP04000 364 aa8.63□□□□□ -1.03
UBFD1-203ENST00000564106 CTLA4P16410 223 aa8.63□□□□□ -1.03
UBFD1-203ENST00000564106 ABOP16442 354 aa8.63□□□□□ -1.03
UBFD1-203ENST00000564106 NR4A1P22736 598 aa8.63□□□□□ -1.03
UBFD1-203ENST00000564106 MAGEA5P43359 124 aa8.63□□□□□ -1.03
UBFD1-203ENST00000564106 EIF1AXP47813 144 aaKnown RBP8.63□□□□□ -1.03
UBFD1-203ENST00000564106 TGM4P49221 684 aa8.63□□□□□ -1.03
UBFD1-203ENST00000564106 LSM3P62310 102 aaKnown RBP8.63□□□□□ -1.03
UBFD1-203ENST00000564106 PPIAP62937 165 aaKnown RBP8.63□□□□□ -1.03
UBFD1-203ENST00000564106 ADAM8P78325 824 aa8.63□□□□□ -1.03
UBFD1-203ENST00000564106 SLC17A1Q14916 467 aa8.63□□□□□ -1.03
UBFD1-203ENST00000564106 SLC10A1Q14973 349 aa8.63□□□□□ -1.03
UBFD1-203ENST00000564106 KRTCAP3Q53RY4 240 aa8.63□□□□□ -1.03
UBFD1-203ENST00000564106 VASNQ6EMK4 673 aa8.63□□□□□ -1.03
UBFD1-203ENST00000564106 ABLIM2Q6H8Q1 611 aa8.63□□□□□ -1.03
UBFD1-203ENST00000564106 RTL6Q6ICC9 239 aa8.63□□□□□ -1.03
UBFD1-203ENST00000564106 NHLRC1Q6VVB1 395 aa8.63□□□□□ -1.03
UBFD1-203ENST00000564106 CREB3L2Q70SY1 520 aa8.63□□□□□ -1.03
UBFD1-203ENST00000564106 UBQLNLQ8IYU4 475 aa8.63□□□□□ -1.03
UBFD1-203ENST00000564106 ZNF511Q8NB15 262 aa8.63□□□□□ -1.03
UBFD1-203ENST00000564106 SYT14Q8NB59 555 aa8.63□□□□□ -1.03
UBFD1-203ENST00000564106 OR9K2Q8NGE7 335 aa8.63□□□□□ -1.03
UBFD1-203ENST00000564106 OR10D3Q8NH80 312 aa8.63□□□□□ -1.03
UBFD1-203ENST00000564106 DYNC2LI1Q8TCX1 351 aa8.63□□□□□ -1.03
UBFD1-203ENST00000564106 ZFAND2BQ8WV99 257 aa8.63□□□□□ -1.03
UBFD1-203ENST00000564106 RPL3LQ92901 407 aaKnown RBP8.63□□□□□ -1.03
UBFD1-203ENST00000564106 SMIM19Q96E16 107 aa8.63□□□□□ -1.03
UBFD1-203ENST00000564106 ADGRG7Q96K78 797 aa8.63□□□□□ -1.03
UBFD1-203ENST00000564106 LURAP1Q96LR2 239 aa8.63□□□□□ -1.03
UBFD1-203ENST00000564106 KCTD7Q96MP8 289 aa8.63□□□□□ -1.03
UBFD1-203ENST00000564106 ISG20L2Q9H9L3 353 aaKnown RBP8.63□□□□□ -1.03
UBFD1-203ENST00000564106 EMC3Q9P0I2 261 aa8.63□□□□□ -1.03
UBFD1-203ENST00000564106 GNG8Q9UK08 70 aa8.63□□□□□ -1.03
UBFD1-203ENST00000564106 MCTS1Q9ULC4 181 aaKnown RBP8.63□□□□□ -1.03
UBFD1-203ENST00000564106 OR6C65A6NJZ3 312 aa8.62□□□□□ -1.03
UBFD1-203ENST00000564106 SMAD9O15198 467 aaKnown RBP8.62□□□□□ -1.03
UBFD1-203ENST00000564106 ZNF254O75437 659 aa8.62□□□□□ -1.03
UBFD1-203ENST00000564106 RGS9O75916 674 aaPredicted RBP8.62□□□□□ -1.03
UBFD1-203ENST00000564106 CLDN14O95500 239 aa8.62□□□□□ -1.03
UBFD1-203ENST00000564106 LALBAP00709 142 aa8.62□□□□□ -1.03
UBFD1-203ENST00000564106 TPOP07202 933 aa8.62□□□□□ -1.03
UBFD1-203ENST00000564106 ZNF708P17019 499 aa8.62□□□□□ -1.03
UBFD1-203ENST00000564106 ALOX5APP20292 161 aa8.62□□□□□ -1.03
UBFD1-203ENST00000564106 LAP3P28838 519 aa8.62□□□□□ -1.03
UBFD1-203ENST00000564106 PTGS2P35354 604 aa8.62□□□□□ -1.03
UBFD1-203ENST00000564106 PEX19P40855 299 aa8.62□□□□□ -1.03
UBFD1-203ENST00000564106 CRYBB2P43320 205 aa8.62□□□□□ -1.03
UBFD1-203ENST00000564106 CSNK1A1P48729 337 aa8.62□□□□□ -1.03
UBFD1-203ENST00000564106 CLDN17P56750 224 aa8.62□□□□□ -1.03
UBFD1-203ENST00000564106 CLDN20P56880 219 aa8.62□□□□□ -1.03
UBFD1-203ENST00000564106 OR12D2P58182 307 aa8.62□□□□□ -1.03
UBFD1-203ENST00000564106 SIRPAP78324 504 aa8.62□□□□□ -1.03
UBFD1-203ENST00000564106 RBPJQ06330 500 aa8.62□□□□□ -1.03
UBFD1-203ENST00000564106 RUNX1T1Q06455 604 aa8.62□□□□□ -1.03
UBFD1-203ENST00000564106 TFF3Q07654 80 aa8.62□□□□□ -1.03
UBFD1-203ENST00000564106 DYNC1I2Q13409 638 aaKnown RBP8.62□□□□□ -1.03
UBFD1-203ENST00000564106 CAMK2DQ13557 499 aa8.62□□□□□ -1.03
UBFD1-203ENST00000564106 CDK5R1Q15078 307 aa8.62□□□□□ -1.03
UBFD1-203ENST00000564106 HIST3H3Q16695 136 aa8.62□□□□□ -1.03
UBFD1-203ENST00000564106 DEGS2Q6QHC5 323 aa8.62□□□□□ -1.03
UBFD1-203ENST00000564106 RPTNQ6XPR3 784 aa8.62□□□□□ -1.03
UBFD1-203ENST00000564106 RHOUQ7L0Q8 258 aa8.62□□□□□ -1.03
UBFD1-203ENST00000564106 CHMP1BQ7LBR1 199 aa8.62□□□□□ -1.03
UBFD1-203ENST00000564106 DPY19L4Q7Z388 723 aa8.62□□□□□ -1.03
UBFD1-203ENST00000564106 LSRQ86X29 649 aaPredicted RBP8.62□□□□□ -1.03
UBFD1-203ENST00000564106 SLC26A10Q8NG04 563 aa8.62□□□□□ -1.03
UBFD1-203ENST00000564106 OR5M9Q8NGP3 310 aa8.62□□□□□ -1.03
UBFD1-203ENST00000564106 OR6N1Q8NGY5 312 aa8.62□□□□□ -1.03
UBFD1-203ENST00000564106 NEIL3Q8TAT5 605 aa8.62□□□□□ -1.03
UBFD1-203ENST00000564106 NDNFQ8TB73 568 aa8.62□□□□□ -1.03
UBFD1-203ENST00000564106 FAM57AQ8TBR7 257 aa8.62□□□□□ -1.03
UBFD1-203ENST00000564106 ZNRF4Q8WWF5 429 aa8.62□□□□□ -1.03
UBFD1-203ENST00000564106 PHYHIPQ92561 330 aa8.62□□□□□ -1.03
UBFD1-203ENST00000564106 ABTB1Q969K4 478 aaPredicted RBP8.62□□□□□ -1.03
UBFD1-203ENST00000564106 PELI1Q96FA3 418 aa8.62□□□□□ -1.03
UBFD1-203ENST00000564106 TXNDC15Q96J42 360 aa8.62□□□□□ -1.03
UBFD1-203ENST00000564106 TIMP4Q99727 224 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms