RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 ZNF420Q8TAQ5 688 aaPredicted RBP8.37□□□□□ -1.07
HDGFL3-204ENST00000563790 KLF14Q8TD94 323 aaPredicted RBP8.37□□□□□ -1.07
HDGFL3-204ENST00000563790 LYZL4Q96KX0 146 aa8.37□□□□□ -1.07
HDGFL3-204ENST00000563790 MS4A4EQ96PG1 132 aa8.37□□□□□ -1.07
HDGFL3-204ENST00000563790 OR2V2Q96R30 315 aa8.37□□□□□ -1.07
HDGFL3-204ENST00000563790 C1orf198Q9H425 327 aa8.37□□□□□ -1.07
HDGFL3-204ENST00000563790 MIEF1Q9NQG6 463 aa8.37□□□□□ -1.07
HDGFL3-204ENST00000563790 TBCCD1Q9NVR7 557 aa8.37□□□□□ -1.07
HDGFL3-204ENST00000563790 KCNE5Q9UJ90 142 aa8.37□□□□□ -1.07
HDGFL3-204ENST00000563790 EMCNQ9ULC0 261 aa8.37□□□□□ -1.07
HDGFL3-204ENST00000563790 UTP11Q9Y3A2 253 aaKnown RBP8.37□□□□□ -1.07
HDGFL3-204ENST00000563790 A6NDX4 124 aa8.36□□□□□ -1.07
HDGFL3-204ENST00000563790 VGLL3A8MV65 326 aa8.36□□□□□ -1.07
HDGFL3-204ENST00000563790 G3V2L1 256 aa8.36□□□□□ -1.07
HDGFL3-204ENST00000563790 AP4M1O00189 453 aa8.36□□□□□ -1.07
HDGFL3-204ENST00000563790 PDPK1O15530 556 aa8.36□□□□□ -1.07
HDGFL3-204ENST00000563790 UBL4AP11441 157 aa8.36□□□□□ -1.07
HDGFL3-204ENST00000563790 B4GALT1P15291 398 aa8.36□□□□□ -1.07
HDGFL3-204ENST00000563790 SDC1P18827 310 aa8.36□□□□□ -1.07
HDGFL3-204ENST00000563790 ATP5F1P24539 256 aaPredicted RBP8.36□□□□□ -1.07
HDGFL3-204ENST00000563790 SERPINB9P50453 376 aa8.36□□□□□ -1.07
HDGFL3-204ENST00000563790 SLC7A5Q01650 507 aa8.36□□□□□ -1.07
HDGFL3-204ENST00000563790 ZNF181Q2M3W8 571 aa8.36□□□□□ -1.07
HDGFL3-204ENST00000563790 PLA1AQ53H76 456 aa8.36□□□□□ -1.07
HDGFL3-204ENST00000563790 RUNDC3AQ59EK9 446 aa8.36□□□□□ -1.07
HDGFL3-204ENST00000563790 SPATA46Q5T0L3 261 aa8.36□□□□□ -1.07
HDGFL3-204ENST00000563790 BTN2A1Q7KYR7 527 aa8.36□□□□□ -1.07
HDGFL3-204ENST00000563790 FAM71E2Q8N5Q1 922 aa8.36□□□□□ -1.07
HDGFL3-204ENST00000563790 OR2T11Q8NH01 316 aa8.36□□□□□ -1.07
HDGFL3-204ENST00000563790 FAM120BQ96EK7 910 aaKnown RBP8.36□□□□□ -1.07
HDGFL3-204ENST00000563790 DMRTB1Q96MA1 342 aa8.36□□□□□ -1.07
HDGFL3-204ENST00000563790 BTBD2Q9BX70 525 aa8.36□□□□□ -1.07
HDGFL3-204ENST00000563790 HOXD1Q9GZZ0 328 aa8.36□□□□□ -1.07
HDGFL3-204ENST00000563790 RAB17Q9H0T7 212 aa8.36□□□□□ -1.07
HDGFL3-204ENST00000563790 DUSP22Q9NRW4 184 aa8.36□□□□□ -1.07
HDGFL3-204ENST00000563790 GIN1Q9NXP7 522 aa8.36□□□□□ -1.07
HDGFL3-204ENST00000563790 ONECUT1Q9UBC0 465 aa8.36□□□□□ -1.07
HDGFL3-204ENST00000563790 PYCARDQ9ULZ3 195 aa8.36□□□□□ -1.07
HDGFL3-204ENST00000563790 NFU1Q9UMS0 254 aa8.36□□□□□ -1.07
HDGFL3-204ENST00000563790 BCAS1O75363 584 aaPredicted RBP8.35□□□□□ -1.07
HDGFL3-204ENST00000563790 HMGN2P05204 90 aaKnown RBP8.35□□□□□ -1.07
HDGFL3-204ENST00000563790 INHBAP08476 426 aa8.35□□□□□ -1.07
HDGFL3-204ENST00000563790 RHCEP18577 417 aa8.35□□□□□ -1.07
HDGFL3-204ENST00000563790 EFNA1P20827 205 aaPredicted RBP8.35□□□□□ -1.07
HDGFL3-204ENST00000563790 HTR5AP47898 357 aa8.35□□□□□ -1.07
HDGFL3-204ENST00000563790 KRT72Q14CN4 511 aa8.35□□□□□ -1.07
HDGFL3-204ENST00000563790 TBC1D28Q2M2D7 210 aa8.35□□□□□ -1.07
HDGFL3-204ENST00000563790 SPDYAQ5MJ70 313 aa8.35□□□□□ -1.07
HDGFL3-204ENST00000563790 CDC73Q6P1J9 531 aa8.35□□□□□ -1.07
HDGFL3-204ENST00000563790 ZCCHC12Q6PEW1 402 aa8.35□□□□□ -1.07
HDGFL3-204ENST00000563790 GRINAQ7Z429 371 aa8.35□□□□□ -1.07
HDGFL3-204ENST00000563790 CMTM4Q8IZR5 234 aa8.35□□□□□ -1.07
HDGFL3-204ENST00000563790 Q8N7P7 452 aa8.35□□□□□ -1.07
HDGFL3-204ENST00000563790 OR1J2Q8NGS2 313 aa8.35□□□□□ -1.07
HDGFL3-204ENST00000563790 PSMA8Q8TAA3 256 aa8.35□□□□□ -1.07
HDGFL3-204ENST00000563790 FGFBP3Q8TAT2 258 aa8.35□□□□□ -1.07
HDGFL3-204ENST00000563790 MZB1Q8WU39 189 aa8.35□□□□□ -1.07
HDGFL3-204ENST00000563790 PMM1Q92871 262 aa8.35□□□□□ -1.07
HDGFL3-204ENST00000563790 CDS1Q92903 461 aa8.35□□□□□ -1.07
HDGFL3-204ENST00000563790 METTL2AQ96IZ6 378 aaKnown RBP8.35□□□□□ -1.07
HDGFL3-204ENST00000563790 STACQ99469 402 aa8.35□□□□□ -1.07
HDGFL3-204ENST00000563790 CCT7Q99832 543 aa8.35□□□□□ -1.07
HDGFL3-204ENST00000563790 PIGUQ9H490 435 aa8.35□□□□□ -1.07
HDGFL3-204ENST00000563790 TUBB1Q9H4B7 451 aa8.35□□□□□ -1.07
HDGFL3-204ENST00000563790 MID1IP1Q9NPA3 183 aa8.35□□□□□ -1.07
HDGFL3-204ENST00000563790 ZFP57Q9NU63 452 aa8.35□□□□□ -1.07
HDGFL3-204ENST00000563790 DNAJB11Q9UBS4 358 aa8.35□□□□□ -1.07
HDGFL3-204ENST00000563790 PITPNC1Q9UKF7 332 aa8.35□□□□□ -1.07
HDGFL3-204ENST00000563790 PKHD1L1Q86WI1 4243 aa8.34□□□□□ -1.07
HDGFL3-204ENST00000563790 LIPT2A6NK58 231 aa8.34□□□□□ -1.07
HDGFL3-204ENST00000563790 H3BSA7 217 aa8.34□□□□□ -1.07
HDGFL3-204ENST00000563790 ZNF208O43345 1280 aa8.34□□□□□ -1.07
HDGFL3-204ENST00000563790 FCN3O75636 299 aa8.34□□□□□ -1.07
HDGFL3-204ENST00000563790 GPIP06744 558 aa8.34□□□□□ -1.07
HDGFL3-204ENST00000563790 PATE4P0C8F1 98 aa8.34□□□□□ -1.07
HDGFL3-204ENST00000563790 ETS2P15036 469 aa8.34□□□□□ -1.07
HDGFL3-204ENST00000563790 PHBP35232 272 aa8.34□□□□□ -1.07
HDGFL3-204ENST00000563790 CLDN17P56750 224 aa8.34□□□□□ -1.07
HDGFL3-204ENST00000563790 POU6F2P78424 691 aaPredicted RBP8.34□□□□□ -1.07
HDGFL3-204ENST00000563790 PTGR1Q14914 329 aa8.34□□□□□ -1.07
HDGFL3-204ENST00000563790 MFSD13AQ14CX5 517 aa8.34□□□□□ -1.07
HDGFL3-204ENST00000563790 AP1ARQ63HQ0 302 aa8.34□□□□□ -1.07
HDGFL3-204ENST00000563790 Q6ZR03 302 aa8.34□□□□□ -1.07
HDGFL3-204ENST00000563790 COLCA1Q6ZS62 124 aa8.34□□□□□ -1.07
HDGFL3-204ENST00000563790 ZNF695Q8IW36 515 aa8.34□□□□□ -1.07
HDGFL3-204ENST00000563790 C1orf87Q8N0U7 546 aa8.34□□□□□ -1.07
HDGFL3-204ENST00000563790 ZNF645Q8N7E2 425 aa8.34□□□□□ -1.07
HDGFL3-204ENST00000563790 COX18Q8N8Q8 333 aa8.34□□□□□ -1.07
HDGFL3-204ENST00000563790 LY6G5BQ8NDX9 201 aa8.34□□□□□ -1.07
HDGFL3-204ENST00000563790 FAM71CQ8NEG0 241 aa8.34□□□□□ -1.07
HDGFL3-204ENST00000563790 SLC25A40Q8TBP6 338 aa8.34□□□□□ -1.07
HDGFL3-204ENST00000563790 DDIT4LQ96D03 193 aa8.34□□□□□ -1.07
HDGFL3-204ENST00000563790 RNF183Q96D59 192 aa8.34□□□□□ -1.07
HDGFL3-204ENST00000563790 OR2J1Q9GZK6 312 aa8.34□□□□□ -1.07
HDGFL3-204ENST00000563790 REEP4Q9H6H4 257 aa8.34□□□□□ -1.07
HDGFL3-204ENST00000563790 PPP1R3EQ9H7J1 279 aa8.34□□□□□ -1.07
HDGFL3-204ENST00000563790 STK38LQ9Y2H1 464 aa8.34□□□□□ -1.07
HDGFL3-204ENST00000563790 HDAC3O15379 428 aa8.33□□□□□ -1.08
HDGFL3-204ENST00000563790 AKAP10O43572 662 aa8.33□□□□□ -1.08
HDGFL3-204ENST00000563790 SNRPAP09012 282 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms