RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 FNDC4Q9H6D8 234 aaPredicted RBP4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 ATP13A3Q9H7F0 1226 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 TMEM30AQ9NV96 361 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 MUTYHQ9UIF7 546 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 SLC7A7Q9UM01 511 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 GUCA1BQ9UMX6 200 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 SAMHD1Q9Y3Z3 626 aaKnown RBP4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 FADS3Q9Y5Q0 445 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 IGLV3-10A0A075B6K4 115 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 SLC22A20A6NK97 555 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 H3BMQ9 156 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 TNFSF11O14788 317 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 PPP1R2P9O14990 202 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 TM9SF1O15321 606 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 EIF4E2O60573 245 aaKnown RBP4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 CLDN14O95500 239 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 IFNA2P01563 188 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 JCHAINP01591 159 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 IGLV3-25P01717 112 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 IGHG4P01861 327 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 GATA1P15976 413 aaPredicted RBP4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 ATP5A1P25705 553 aaKnown RBP4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 IVDP26440 423 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 MIPP30301 263 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 COILP38432 576 aaPredicted RBP4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 PLA2G5P39877 138 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 CCR2P41597 374 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 XCR1P46094 333 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 XKP51811 444 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 MLLT10P55197 1068 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 RAB14P61106 215 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 SEC61A1P61619 476 aaKnown RBP4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 IL9RQ01113 521 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 GNA12Q03113 381 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 LTBQ06643 244 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 CKAP4Q07065 602 aaKnown RBP4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 TPBGQ13641 420 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 GTF2H2Q13888 395 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 GPR18Q14330 331 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 DUSP7Q16829 419 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 TIGITQ495A1 244 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 SPANXN4Q5MJ08 99 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 FFAR4Q5NUL3 377 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 SYPL2Q5VXT5 272 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 OR5M10Q6IEU7 315 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 FBXL22Q6P050 247 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 GTF2H2CQ6P1K8 395 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 ATRAIDQ6UW56 229 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 CCNI2Q6ZMN8 369 aaPredicted RBP4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 Q6ZVQ6 151 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 TMEM150AQ86TG1 271 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 DND1Q8IYX4 353 aaKnown RBP4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 IQCKQ8N0W5 287 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 UMODL1-AS1Q8N2C9 162 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 TMEM156Q8N614 296 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 KBTBD8Q8NFY9 601 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 AENQ8WTP8 325 aaKnown RBP4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 TFB1MQ8WVM0 346 aaKnown RBP4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 CLDN23Q96B33 292 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 ZBED6CLQ96FA7 236 aaPredicted RBP4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 PDLIM2Q96JY6 352 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 RNF2Q99496 336 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 EPYCQ99645 322 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 IL12RB2Q99665 862 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 LPAR4Q99677 370 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 RBBP8Q99708 897 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 OVOL2Q9BRP0 275 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 MLST8Q9BVC4 326 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 NIPAL2Q9H841 368 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 NMUR1Q9HB89 426 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 ACP6Q9NPH0 428 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 HEBP1Q9NRV9 189 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 MAT2BQ9NZL9 334 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 APOBEC3BQ9UH17 382 aaKnown RBP4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 NDRG2Q9UN36 371 aaKnown RBP4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 HYOU1Q9Y4L1 999 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 CDH10Q9Y6N8 788 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 ANK1P16157 1881 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 GBF1Q92538 1859 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 PLXNA4Q9HCM2 1894 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 DNAH12Q6ZR08 3092 aa4.43□□□□□ -1.7
VPS35P1-201ENST00000563400 A0A0A6YYD4 124 aa4.42□□□□□ -1.7
VPS35P1-201ENST00000563400 IGHV4-28A0A0C4DH34 117 aa4.42□□□□□ -1.7
VPS35P1-201ENST00000563400 LOC105371267A0A1B0GV96 52 aa4.42□□□□□ -1.7
VPS35P1-201ENST00000563400 TCRBV9S1A1TA0A576 114 aa4.42□□□□□ -1.7
VPS35P1-201ENST00000563400 OR5H15A6NDH6 313 aa4.42□□□□□ -1.7
VPS35P1-201ENST00000563400 CCDC182A6NF36 153 aa4.42□□□□□ -1.7
VPS35P1-201ENST00000563400 GOLGA6L10A6NI86 522 aa4.42□□□□□ -1.7
VPS35P1-201ENST00000563400 ZNF814B7Z6K7 855 aa4.42□□□□□ -1.7
VPS35P1-201ENST00000563400 LRRN3E7EW58 273 aa4.42□□□□□ -1.7
VPS35P1-201ENST00000563400 FCN1O00602 326 aa4.42□□□□□ -1.7
VPS35P1-201ENST00000563400 HSD17B6O14756 317 aa4.42□□□□□ -1.7
VPS35P1-201ENST00000563400 HCRTO43612 131 aa4.42□□□□□ -1.7
VPS35P1-201ENST00000563400 XPNPEP2O43895 674 aa4.42□□□□□ -1.7
VPS35P1-201ENST00000563400 OXSR1O95747 527 aaPredicted RBP4.42□□□□□ -1.7
VPS35P1-201ENST00000563400 PET100P0DJ07 73 aa4.42□□□□□ -1.7
VPS35P1-201ENST00000563400 H2AFXP16104 143 aaPredicted RBP4.42□□□□□ -1.7
VPS35P1-201ENST00000563400 KDELR1P24390 212 aa4.42□□□□□ -1.7
VPS35P1-201ENST00000563400 OPRD1P41143 372 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms