RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 TSTD3H0UI37 97 aa12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 IFNA17P01571 189 aa12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 CD5P06127 495 aa12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 NDUFA6P56556 154 aa12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 PKIAP61925 76 aa12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 RAB30Q15771 203 aa12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 ZNF542PQ5EBM4 170 aa12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 OR4C11Q6IEV9 310 aa12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 UNQ9370/PRO34162Q6UXP9 181 aa12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 SHISA5Q8N114 240 aa12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 RAB42Q8N4Z0 105 aa12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 OR4K17Q8NGC6 315 aa12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 PATE1Q8WXA2 126 aa12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 SLC41A3Q96GZ6 507 aa12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 KIRREL1Q96J84 757 aa12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 XRCC3O43542 346 aa12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 HLA-AP01891 365 aaKnown RBP12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 RBM34P42696 430 aaKnown RBP12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 RGS8P57771 180 aaPredicted RBP12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 LTBQ06643 244 aa12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 CRMP1Q14194 572 aa12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 LASP1Q14847 261 aaKnown RBP12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 DND1Q8IYX4 353 aaKnown RBP12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 OR2L3Q8NG85 312 aa12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 SECTM1Q8WVN6 248 aa12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 MCHR1Q99705 422 aa12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 TIMM29Q9BSF4 260 aa12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 ACTRT3Q9BYD9 372 aa12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 PCBD2Q9H0N5 130 aa12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 TUBA4BQ9H853 241 aa12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 CMC2Q9NRP2 79 aa12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 STEAP1Q9UHE8 339 aa12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 MAN2B1O00754 1011 aa12.69□□□□□ -0.38
GTF3C1-203ENST00000562609 CD1CP29017 333 aa12.69□□□□□ -0.38
GTF3C1-203ENST00000562609 NR0B2Q15466 257 aa12.69□□□□□ -0.38
GTF3C1-203ENST00000562609 LBHQ53QV2 105 aaPredicted RBP12.69□□□□□ -0.38
GTF3C1-203ENST00000562609 RPL22L1Q6P5R6 122 aaKnown RBP12.69□□□□□ -0.38
GTF3C1-203ENST00000562609 DRAM2Q6UX65 266 aa12.69□□□□□ -0.38
GTF3C1-203ENST00000562609 DCUN1D4Q92564 292 aa12.69□□□□□ -0.38
GTF3C1-203ENST00000562609 ZBTB8AQ96BR9 441 aa12.69□□□□□ -0.38
GTF3C1-203ENST00000562609 BMFQ96LC9 184 aa12.69□□□□□ -0.38
GTF3C1-203ENST00000562609 ARHGDIGQ99819 225 aa12.69□□□□□ -0.38
GTF3C1-203ENST00000562609 SLC7A7Q9UM01 511 aa12.69□□□□□ -0.38
GTF3C1-203ENST00000562609 ATG4BQ9Y4P1 393 aa12.69□□□□□ -0.38
GTF3C1-203ENST00000562609 KCNE3Q9Y6H6 103 aa12.69□□□□□ -0.38
GTF3C1-203ENST00000562609 MUC3AQ02505 3323 aa12.69□□□□□ -0.38
GTF3C1-203ENST00000562609 SYNDIG1LA6NDD5 238 aa12.69□□□□□ -0.38
GTF3C1-203ENST00000562609 IFNA10P01566 189 aa12.69□□□□□ -0.38
GTF3C1-203ENST00000562609 KHKP50053 298 aa12.69□□□□□ -0.38
GTF3C1-203ENST00000562609 LSM6P62312 80 aaKnown RBP12.69□□□□□ -0.38
GTF3C1-203ENST00000562609 AMZ1Q400G9 498 aa12.69□□□□□ -0.38
GTF3C1-203ENST00000562609 ACTBL2Q562R1 376 aa12.69□□□□□ -0.38
GTF3C1-203ENST00000562609 TCEAL6Q6IPX3 200 aa12.69□□□□□ -0.38
GTF3C1-203ENST00000562609 ALKBH2Q6NS38 261 aa12.69□□□□□ -0.38
GTF3C1-203ENST00000562609 THSD4Q6ZMP0 1018 aa12.69□□□□□ -0.38
GTF3C1-203ENST00000562609 LCN9Q8WX39 176 aa12.69□□□□□ -0.38
GTF3C1-203ENST00000562609 ZMYND19Q96E35 227 aaPredicted RBP12.69□□□□□ -0.38
GTF3C1-203ENST00000562609 MALSU1Q96EH3 234 aa12.69□□□□□ -0.38
GTF3C1-203ENST00000562609 CD180Q99467 661 aa12.69□□□□□ -0.38
GTF3C1-203ENST00000562609 ELF4Q99607 663 aaPredicted RBP12.69□□□□□ -0.38
GTF3C1-203ENST00000562609 MRPL37Q9BZE1 423 aaKnown RBP12.69□□□□□ -0.38
GTF3C1-203ENST00000562609 SMOC1Q9H4F8 434 aa12.69□□□□□ -0.38
GTF3C1-203ENST00000562609 CYTL1Q9NRR1 136 aa12.69□□□□□ -0.38
GTF3C1-203ENST00000562609 TP53TG5Q9Y2B4 290 aa12.69□□□□□ -0.38
GTF3C1-203ENST00000562609 SLC35A3Q9Y2D2 325 aa12.69□□□□□ -0.38
GTF3C1-203ENST00000562609 TRAV18A0A075B6X5 111 aa12.68□□□□□ -0.38
GTF3C1-203ENST00000562609 LOC100509620A0A075B734 347 aa12.68□□□□□ -0.38
GTF3C1-203ENST00000562609 EEF1E1-BLOC1S5C9J1V9 151 aa12.68□□□□□ -0.38
GTF3C1-203ENST00000562609 NAA10P41227 235 aaPredicted RBP12.68□□□□□ -0.38
GTF3C1-203ENST00000562609 NAAAQ02083 359 aa12.68□□□□□ -0.38
GTF3C1-203ENST00000562609 DUSP2Q05923 314 aa12.68□□□□□ -0.38
GTF3C1-203ENST00000562609 HYAL4Q2M3T9 481 aa12.68□□□□□ -0.38
GTF3C1-203ENST00000562609 ATPAF1Q5TC12 328 aaPredicted RBP12.68□□□□□ -0.38
GTF3C1-203ENST00000562609 PAPD4Q6PIY7 484 aaKnown RBP12.68□□□□□ -0.38
GTF3C1-203ENST00000562609 TMPRSS12Q86WS5 348 aa12.68□□□□□ -0.38
GTF3C1-203ENST00000562609 CCDC116Q8IYX3 515 aa12.68□□□□□ -0.38
GTF3C1-203ENST00000562609 OR51L1Q8NGJ5 315 aa12.68□□□□□ -0.38
GTF3C1-203ENST00000562609 OR2L8Q8NGY9 312 aa12.68□□□□□ -0.38
GTF3C1-203ENST00000562609 GPBAR1Q8TDU6 330 aa12.68□□□□□ -0.38
GTF3C1-203ENST00000562609 KRCC1Q9NPI7 259 aaPredicted RBP12.68□□□□□ -0.38
GTF3C1-203ENST00000562609 OR2S2Q9NQN1 319 aa12.68□□□□□ -0.38
GTF3C1-203ENST00000562609 SIDT1Q9NXL6 827 aaKnown RBP12.68□□□□□ -0.38
GTF3C1-203ENST00000562609 ZDHHC8Q9ULC8 765 aa12.68□□□□□ -0.38
GTF3C1-203ENST00000562609 ETV7Q9Y603 341 aa12.68□□□□□ -0.38
GTF3C1-203ENST00000562609 KPTNQ9Y664 436 aa12.68□□□□□ -0.38
GTF3C1-203ENST00000562609 TEX13DA0A0J9YY54 714 aaPredicted RBP12.68□□□□□ -0.38
GTF3C1-203ENST00000562609 RIIAD1A6NNX1 92 aa12.68□□□□□ -0.38
GTF3C1-203ENST00000562609 GPR89AB7ZAQ6 455 aa12.68□□□□□ -0.38
GTF3C1-203ENST00000562609 M0QYG6 137 aa12.68□□□□□ -0.38
GTF3C1-203ENST00000562609 GPR89BP0CG08 455 aa12.68□□□□□ -0.38
GTF3C1-203ENST00000562609 G0S2P27469 103 aa12.68□□□□□ -0.38
GTF3C1-203ENST00000562609 NDUFS1P28331 727 aa12.68□□□□□ -0.38
GTF3C1-203ENST00000562609 LPAR6P43657 344 aa12.68□□□□□ -0.38
GTF3C1-203ENST00000562609 ANGPTL5Q86XS5 388 aa12.68□□□□□ -0.38
GTF3C1-203ENST00000562609 GALNT16Q8N428 558 aa12.68□□□□□ -0.38
GTF3C1-203ENST00000562609 ZNF511Q8NB15 262 aa12.68□□□□□ -0.38
GTF3C1-203ENST00000562609 CLEC1AQ8NC01 280 aa12.68□□□□□ -0.38
GTF3C1-203ENST00000562609 OR56B1Q8NGI3 324 aa12.68□□□□□ -0.38
GTF3C1-203ENST00000562609 DOK4Q8TEW6 326 aa12.68□□□□□ -0.38
GTF3C1-203ENST00000562609 FOXRED1Q96CU9 486 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms