RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 OR2H1Q9GZK4 316 aa11.63□□□□□ -0.55
CDH1-204ENST00000562118 ST6GALNAC2Q9UJ37 374 aa11.63□□□□□ -0.55
CDH1-204ENST00000562118 CELSR1Q9NYQ6 3014 aa11.62□□□□□ -0.55
CDH1-204ENST00000562118 A0A1W2PPL8 197 aa11.62□□□□□ -0.55
CDH1-204ENST00000562118 OR6C6A6NF89 314 aa11.62□□□□□ -0.55
CDH1-204ENST00000562118 RIIAD1A6NNX1 92 aa11.62□□□□□ -0.55
CDH1-204ENST00000562118 C12orf71A8MTZ7 269 aa11.62□□□□□ -0.55
CDH1-204ENST00000562118 ANKRD65E5RJM6 399 aa11.62□□□□□ -0.55
CDH1-204ENST00000562118 E7EQL1 145 aa11.62□□□□□ -0.55
CDH1-204ENST00000562118 ATP6V1G2-DDX39BF2Z307 99 aa11.62□□□□□ -0.55
CDH1-204ENST00000562118 EI24O14681 340 aa11.62□□□□□ -0.55
CDH1-204ENST00000562118 CASQ2O14958 399 aaPredicted RBP11.62□□□□□ -0.55
CDH1-204ENST00000562118 MPZL1O95297 269 aa11.62□□□□□ -0.55
CDH1-204ENST00000562118 RAB36O95755 333 aa11.62□□□□□ -0.55
CDH1-204ENST00000562118 PCBD1P61457 104 aa11.62□□□□□ -0.55
CDH1-204ENST00000562118 HGFACQ04756 655 aa11.62□□□□□ -0.55
CDH1-204ENST00000562118 PIGFQ07326 219 aa11.62□□□□□ -0.55
CDH1-204ENST00000562118 NPRL3Q12980 569 aa11.62□□□□□ -0.55
CDH1-204ENST00000562118 TEX30Q5JUR7 227 aa11.62□□□□□ -0.55
CDH1-204ENST00000562118 C11orf71Q6IPW1 123 aa11.62□□□□□ -0.55
CDH1-204ENST00000562118 TMEM53Q6P2H8 277 aa11.62□□□□□ -0.55
CDH1-204ENST00000562118 LRRC18Q8N456 261 aa11.62□□□□□ -0.55
CDH1-204ENST00000562118 ICA1LQ8NDH6 482 aa11.62□□□□□ -0.55
CDH1-204ENST00000562118 CPEB3Q8NE35 698 aaKnown RBP11.62□□□□□ -0.55
CDH1-204ENST00000562118 OR4F15Q8NGB8 312 aa11.62□□□□□ -0.55
CDH1-204ENST00000562118 AKAP1Q92667 903 aaKnown RBP eCLIP11.62□□□□□ -0.55
CDH1-204ENST00000562118 NEUROG1Q92886 237 aa11.62□□□□□ -0.55
CDH1-204ENST00000562118 MS4A3Q96HJ5 214 aa11.62□□□□□ -0.55
CDH1-204ENST00000562118 POM121L2Q96KW2 1035 aa11.62□□□□□ -0.55
CDH1-204ENST00000562118 C9orf16Q9BUW7 83 aa11.62□□□□□ -0.55
CDH1-204ENST00000562118 LIME1Q9H400 295 aa11.62□□□□□ -0.55
CDH1-204ENST00000562118 ZNF442Q9H7R0 627 aa11.62□□□□□ -0.55
CDH1-204ENST00000562118 HINT3Q9NQE9 182 aaKnown RBP11.62□□□□□ -0.55
CDH1-204ENST00000562118 CYB5R1Q9UHQ9 305 aa11.62□□□□□ -0.55
CDH1-204ENST00000562118 TIMM10BQ9Y5J6 103 aa11.62□□□□□ -0.55
CDH1-204ENST00000562118 LHFPL6Q9Y693 200 aa11.62□□□□□ -0.55
CDH1-204ENST00000562118 MYO9AB2RTY4 2548 aa11.62□□□□□ -0.55
CDH1-204ENST00000562118 PRRC2AP48634 2157 aaKnown RBP11.61□□□□□ -0.55
CDH1-204ENST00000562118 ARFGEF3Q5TH69 2177 aa11.61□□□□□ -0.55
CDH1-204ENST00000562118 CCDC168Q8NDH2 2452 aa11.61□□□□□ -0.55
CDH1-204ENST00000562118 OVOL3O00110 214 aa11.61□□□□□ -0.55
CDH1-204ENST00000562118 DLGAP1O14490 977 aa11.61□□□□□ -0.55
CDH1-204ENST00000562118 PRODHO43272 600 aa11.61□□□□□ -0.55
CDH1-204ENST00000562118 SYNGR3O43761 229 aa11.61□□□□□ -0.55
CDH1-204ENST00000562118 GPANK1O95872 356 aa11.61□□□□□ -0.55
CDH1-204ENST00000562118 PTHP01270 115 aa11.61□□□□□ -0.55
CDH1-204ENST00000562118 CRYAAP02489 173 aa11.61□□□□□ -0.55
CDH1-204ENST00000562118 PSKH1P11801 424 aa11.61□□□□□ -0.55
CDH1-204ENST00000562118 ANPEPP15144 967 aa11.61□□□□□ -0.55
CDH1-204ENST00000562118 NR4A1P22736 598 aa11.61□□□□□ -0.55
CDH1-204ENST00000562118 PCSK6P29122 969 aa11.61□□□□□ -0.55
CDH1-204ENST00000562118 BLVRAP53004 296 aa11.61□□□□□ -0.55
CDH1-204ENST00000562118 CDH11P55287 796 aa11.61□□□□□ -0.55
CDH1-204ENST00000562118 ELF3P78545 371 aaPredicted RBP11.61□□□□□ -0.55
CDH1-204ENST00000562118 DBPQ10586 325 aaPredicted RBP11.61□□□□□ -0.55
CDH1-204ENST00000562118 RAB39AQ14964 217 aa11.61□□□□□ -0.55
CDH1-204ENST00000562118 SGCAQ16586 387 aa11.61□□□□□ -0.55
CDH1-204ENST00000562118 PABPC1L2AQ5JQF8 200 aa11.61□□□□□ -0.55
CDH1-204ENST00000562118 TMEM236Q5W0B7 351 aa11.61□□□□□ -0.55
CDH1-204ENST00000562118 SLC18B1Q6NT16 456 aa11.61□□□□□ -0.55
CDH1-204ENST00000562118 ZNF544Q6NX49 715 aa11.61□□□□□ -0.55
CDH1-204ENST00000562118 CBR4Q8N4T8 237 aa11.61□□□□□ -0.55
CDH1-204ENST00000562118 NRGNQ92686 78 aa11.61□□□□□ -0.55
CDH1-204ENST00000562118 STMN2Q93045 179 aa11.61□□□□□ -0.55
CDH1-204ENST00000562118 FBXW5Q969U6 566 aa11.61□□□□□ -0.55
CDH1-204ENST00000562118 HRASLS5Q96KN8 279 aa11.61□□□□□ -0.55
CDH1-204ENST00000562118 RDH12Q96NR8 316 aa11.61□□□□□ -0.55
CDH1-204ENST00000562118 PITX2Q99697 317 aa11.61□□□□□ -0.55
CDH1-204ENST00000562118 SLC29A1Q99808 456 aa11.61□□□□□ -0.55
CDH1-204ENST00000562118 DHRS9Q9BPW9 319 aa11.61□□□□□ -0.55
CDH1-204ENST00000562118 SRA1Q9HD15 236 aaKnown RBP11.61□□□□□ -0.55
CDH1-204ENST00000562118 EMC7Q9NPA0 242 aa11.61□□□□□ -0.55
CDH1-204ENST00000562118 PNRC2Q9NPJ4 139 aaKnown RBP11.61□□□□□ -0.55
CDH1-204ENST00000562118 MOKQ9UQ07 419 aa11.61□□□□□ -0.55
CDH1-204ENST00000562118 COMMD3-BMI1R4GMX3 469 aa11.61□□□□□ -0.55
CDH1-204ENST00000562118 LOC100509620A0A075B734 347 aa11.6□□□□□ -0.55
CDH1-204ENST00000562118 GLCEO94923 617 aa11.6□□□□□ -0.55
CDH1-204ENST00000562118 CD8AP01732 235 aa11.6□□□□□ -0.55
CDH1-204ENST00000562118 RAF1P04049 648 aa11.6□□□□□ -0.55
CDH1-204ENST00000562118 CLUP10909 449 aa11.6□□□□□ -0.55
CDH1-204ENST00000562118 POU1F1P28069 291 aa11.6□□□□□ -0.55
CDH1-204ENST00000562118 POLR2IP36954 125 aaKnown RBP11.6□□□□□ -0.55
CDH1-204ENST00000562118 GUCA1AP43080 201 aaPredicted RBP11.6□□□□□ -0.55
CDH1-204ENST00000562118 CAPZA2P47755 286 aa11.6□□□□□ -0.55
CDH1-204ENST00000562118 TEKQ02763 1124 aa11.6□□□□□ -0.55
CDH1-204ENST00000562118 SCRN3Q0VDG4 424 aa11.6□□□□□ -0.55
CDH1-204ENST00000562118 RCN1Q15293 331 aa11.6□□□□□ -0.55
CDH1-204ENST00000562118 CCDC92Q53HC0 331 aaPredicted RBP11.6□□□□□ -0.55
CDH1-204ENST00000562118 SLC35D3Q5M8T2 416 aa11.6□□□□□ -0.55
CDH1-204ENST00000562118 AADACL4Q5VUY2 407 aa11.6□□□□□ -0.55
CDH1-204ENST00000562118 VASH1Q7L8A9 365 aaPredicted RBP11.6□□□□□ -0.55
CDH1-204ENST00000562118 CDH24Q86UP0 819 aa11.6□□□□□ -0.55
CDH1-204ENST00000562118 TIGD4Q8IY51 512 aa11.6□□□□□ -0.55
CDH1-204ENST00000562118 PAQR4Q8N4S7 273 aaPredicted RBP11.6□□□□□ -0.55
CDH1-204ENST00000562118 SLC30A7Q8NEW0 376 aa11.6□□□□□ -0.55
CDH1-204ENST00000562118 OR9Q1Q8NGQ5 310 aa11.6□□□□□ -0.55
CDH1-204ENST00000562118 TMEM171Q8WVE6 324 aa11.6□□□□□ -0.55
CDH1-204ENST00000562118 MBOAT4Q96T53 435 aa11.6□□□□□ -0.55
CDH1-204ENST00000562118 CXXC4Q9H2H0 198 aa11.6□□□□□ -0.55
CDH1-204ENST00000562118 KCNN2Q9H2S1 579 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms