RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 CRABP1P29762 137 aa17.19■□□□□ 0.34
TSPAN3-210ENST00000561277 PCBD1P61457 104 aa17.19■□□□□ 0.34
TSPAN3-210ENST00000561277 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.19■□□□□ 0.34
TSPAN3-210ENST00000561277 RAB35Q15286 201 aa17.19■□□□□ 0.34
TSPAN3-210ENST00000561277 SVOPLQ8N434 492 aa17.19■□□□□ 0.34
TSPAN3-210ENST00000561277 WNT5BQ9H1J7 359 aa17.19■□□□□ 0.34
TSPAN3-210ENST00000561277 CMAHPQ9Y471 501 aa17.19■□□□□ 0.34
TSPAN3-210ENST00000561277 TIMM10BQ9Y5J6 103 aa17.19■□□□□ 0.34
TSPAN3-210ENST00000561277 PMF1-BGLAPU3KQ54 211 aa17.19■□□□□ 0.34
TSPAN3-210ENST00000561277 ARRDC5A6NEK1 342 aa17.18■□□□□ 0.34
TSPAN3-210ENST00000561277 TRIM64A6NGJ6 449 aa17.18■□□□□ 0.34
TSPAN3-210ENST00000561277 TRIM64BA6NI03 449 aa17.18■□□□□ 0.34
TSPAN3-210ENST00000561277 B9A039 149 aa17.18■□□□□ 0.34
TSPAN3-210ENST00000561277 H7C417 338 aa17.18■□□□□ 0.34
TSPAN3-210ENST00000561277 STOMP27105 288 aa17.18■□□□□ 0.34
TSPAN3-210ENST00000561277 ZNF774Q6NX45 483 aa17.18■□□□□ 0.34
TSPAN3-210ENST00000561277 ASRGL1Q7L266 308 aa17.18■□□□□ 0.34
TSPAN3-210ENST00000561277 ALDH16A1Q8IZ83 802 aa17.18■□□□□ 0.34
TSPAN3-210ENST00000561277 OR6V1Q8N148 313 aa17.18■□□□□ 0.34
TSPAN3-210ENST00000561277 OR1J2Q8NGS2 313 aa17.18■□□□□ 0.34
TSPAN3-210ENST00000561277 PLK3Q9H4B4 646 aa17.18■□□□□ 0.34
TSPAN3-210ENST00000561277 FZR1Q9UM11 496 aa17.18■□□□□ 0.34
TSPAN3-210ENST00000561277 MED13LQ71F56 2210 aa17.17■□□□□ 0.34
TSPAN3-210ENST00000561277 IGLV1-36A0A0B4J1U3 117 aa17.17■□□□□ 0.34
TSPAN3-210ENST00000561277 C5orf49A4QMS7 147 aa17.17■□□□□ 0.34
TSPAN3-210ENST00000561277 OR6C68A6NDL8 312 aa17.17■□□□□ 0.34
TSPAN3-210ENST00000561277 FAM171A2A8MVW0 826 aa17.17■□□□□ 0.34
TSPAN3-210ENST00000561277 H3BN98 237 aa17.17■□□□□ 0.34
TSPAN3-210ENST00000561277 SSX4O60224 188 aa17.17■□□□□ 0.34
TSPAN3-210ENST00000561277 CIB2O75838 187 aa17.17■□□□□ 0.34
TSPAN3-210ENST00000561277 NUDT6P53370 316 aa17.17■□□□□ 0.34
TSPAN3-210ENST00000561277 CCNIQ14094 377 aa17.17■□□□□ 0.34
TSPAN3-210ENST00000561277 EFNB3Q15768 340 aa17.17■□□□□ 0.34
TSPAN3-210ENST00000561277 MSMPQ1L6U9 139 aa17.17■□□□□ 0.34
TSPAN3-210ENST00000561277 CYB561A3Q8NBI2 242 aa17.17■□□□□ 0.34
TSPAN3-210ENST00000561277 ICA1LQ8NDH6 482 aa17.17■□□□□ 0.34
TSPAN3-210ENST00000561277 OR2T33Q8NG76 320 aa17.17■□□□□ 0.34
TSPAN3-210ENST00000561277 OR4Q3Q8NH05 313 aa17.17■□□□□ 0.34
TSPAN3-210ENST00000561277 C11orf40Q8WZ69 217 aa17.17■□□□□ 0.34
TSPAN3-210ENST00000561277 SNX18Q96RF0 628 aa17.17■□□□□ 0.34
TSPAN3-210ENST00000561277 BARX1Q9HBU1 254 aaPredicted RBP17.17■□□□□ 0.34
TSPAN3-210ENST00000561277 ASH2LQ9UBL3 628 aa17.17■□□□□ 0.34
TSPAN3-210ENST00000561277 B9D1Q9UPM9 204 aa17.17■□□□□ 0.34
TSPAN3-210ENST00000561277 POLR1DQ9Y2S0 133 aa17.17■□□□□ 0.34
TSPAN3-210ENST00000561277 DEAF1O75398 565 aaPredicted RBP17.16■□□□□ 0.34
TSPAN3-210ENST00000561277 SNAP29O95721 258 aa17.16■□□□□ 0.34
TSPAN3-210ENST00000561277 TP53P04637 393 aaPredicted RBP17.16■□□□□ 0.34
TSPAN3-210ENST00000561277 PRKACGP22612 351 aa17.16■□□□□ 0.34
TSPAN3-210ENST00000561277 GLRXP35754 106 aa17.16■□□□□ 0.34
TSPAN3-210ENST00000561277 GDI2P50395 445 aaKnown RBP17.16■□□□□ 0.34
TSPAN3-210ENST00000561277 RPS23P62266 143 aaKnown RBP17.16■□□□□ 0.34
TSPAN3-210ENST00000561277 MEP1BQ16820 701 aa17.16■□□□□ 0.34
TSPAN3-210ENST00000561277 CLEC12BQ2HXU8 276 aa17.16■□□□□ 0.34
TSPAN3-210ENST00000561277 SLC36A3Q495N2 470 aa17.16■□□□□ 0.34
TSPAN3-210ENST00000561277 LNX2Q8N448 690 aa17.16■□□□□ 0.34
TSPAN3-210ENST00000561277 NPEPL1Q8NDH3 523 aa17.16■□□□□ 0.34
TSPAN3-210ENST00000561277 TEX47Q8TBZ9 253 aa17.16■□□□□ 0.34
TSPAN3-210ENST00000561277 MRPL24Q96A35 216 aaKnown RBP17.16■□□□□ 0.34
TSPAN3-210ENST00000561277 POM121L2Q96KW2 1035 aa17.16■□□□□ 0.34
TSPAN3-210ENST00000561277 VRK1Q99986 396 aaPredicted RBP17.16■□□□□ 0.34
TSPAN3-210ENST00000561277 SYT3Q9BQG1 590 aa17.16■□□□□ 0.34
TSPAN3-210ENST00000561277 MRPL37Q9BZE1 423 aaKnown RBP17.16■□□□□ 0.34
TSPAN3-210ENST00000561277 LOC100509620A0A075B734 347 aa17.15■□□□□ 0.34
TSPAN3-210ENST00000561277 EBAG9O00559 213 aa17.15■□□□□ 0.34
TSPAN3-210ENST00000561277 GAAP10253 952 aa17.15■□□□□ 0.34
TSPAN3-210ENST00000561277 ERVS71-1P61550 626 aa17.15■□□□□ 0.34
TSPAN3-210ENST00000561277 SCRN3Q0VDG4 424 aa17.15■□□□□ 0.34
TSPAN3-210ENST00000561277 COX10Q12887 443 aa17.15■□□□□ 0.34
TSPAN3-210ENST00000561277 AQP6Q13520 282 aa17.15■□□□□ 0.34
TSPAN3-210ENST00000561277 CD300LDQ6UXZ3 194 aa17.15■□□□□ 0.34
TSPAN3-210ENST00000561277 SYT9Q86SS6 491 aa17.15■□□□□ 0.34
TSPAN3-210ENST00000561277 IQCF1Q8N6M8 205 aa17.15■□□□□ 0.34
TSPAN3-210ENST00000561277 UTP4Q969X6 686 aaKnown RBP17.15■□□□□ 0.34
TSPAN3-210ENST00000561277 RACGAP1Q9H0H5 632 aa17.15■□□□□ 0.34
TSPAN3-210ENST00000561277 ZNF556Q9HAH1 456 aa17.15■□□□□ 0.34
TSPAN3-210ENST00000561277 DYNLRB1Q9NP97 96 aa17.15■□□□□ 0.34
TSPAN3-210ENST00000561277 ACANP16112 2415 aa17.15■□□□□ 0.34
TSPAN3-210ENST00000561277 H7C1Q1 480 aa17.15■□□□□ 0.34
TSPAN3-210ENST00000561277 DOK2O60496 412 aa17.15■□□□□ 0.34
TSPAN3-210ENST00000561277 LY6HO94772 140 aa17.15■□□□□ 0.34
TSPAN3-210ENST00000561277 HLA-DQA2P01906 255 aa17.15■□□□□ 0.34
TSPAN3-210ENST00000561277 LCKP06239 509 aa17.15■□□□□ 0.34
TSPAN3-210ENST00000561277 POU1F1P28069 291 aa17.15■□□□□ 0.34
TSPAN3-210ENST00000561277 ARHGDIAP52565 204 aa17.15■□□□□ 0.34
TSPAN3-210ENST00000561277 LSM6P62312 80 aaKnown RBP17.15■□□□□ 0.34
TSPAN3-210ENST00000561277 GLO1Q04760 184 aa17.15■□□□□ 0.34
TSPAN3-210ENST00000561277 CIARTQ8N365 385 aaPredicted RBP17.15■□□□□ 0.34
TSPAN3-210ENST00000561277 ATG16L2Q8NAA4 619 aa17.15■□□□□ 0.34
TSPAN3-210ENST00000561277 SORCS2Q96PQ0 1159 aa17.15■□□□□ 0.34
TSPAN3-210ENST00000561277 WACQ9BTA9 647 aa17.15■□□□□ 0.34
TSPAN3-210ENST00000561277 NTN4Q9HB63 628 aa17.15■□□□□ 0.34
TSPAN3-210ENST00000561277 DLL4Q9NR61 685 aa17.15■□□□□ 0.34
TSPAN3-210ENST00000561277 REV1Q9UBZ9 1251 aa17.15■□□□□ 0.34
TSPAN3-210ENST00000561277 DUSP13Q9UII6 198 aa17.15■□□□□ 0.34
TSPAN3-210ENST00000561277 BAIAP2Q9UQB8 552 aa17.15■□□□□ 0.34
TSPAN3-210ENST00000561277 FKBP7Q9Y680 259 aa17.15■□□□□ 0.34
TSPAN3-210ENST00000561277 ARFGEF3Q5TH69 2177 aa17.15■□□□□ 0.34
TSPAN3-210ENST00000561277 TMEM129A0AVI4 362 aa17.14■□□□□ 0.33
TSPAN3-210ENST00000561277 SGCEO43556 437 aa17.14■□□□□ 0.33
TSPAN3-210ENST00000561277 RAD52P43351 418 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms