RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 SLC2A5P22732 501 aa8.35□□□□□ -1.07
RABGGTA-221ENST00000561055 EPHA2P29317 976 aa8.35□□□□□ -1.07
RABGGTA-221ENST00000561055 CAPZA2P47755 286 aa8.35□□□□□ -1.07
RABGGTA-221ENST00000561055 IDH3GP51553 393 aaPredicted RBP8.35□□□□□ -1.07
RABGGTA-221ENST00000561055 RAD23AP54725 363 aa8.35□□□□□ -1.07
RABGGTA-221ENST00000561055 PSG4Q00888 419 aa8.35□□□□□ -1.07
RABGGTA-221ENST00000561055 TEKQ02763 1124 aa8.35□□□□□ -1.07
RABGGTA-221ENST00000561055 PLP2Q04941 152 aa8.35□□□□□ -1.07
RABGGTA-221ENST00000561055 SCRN3Q0VDG4 424 aa8.35□□□□□ -1.07
RABGGTA-221ENST00000561055 AQP6Q13520 282 aa8.35□□□□□ -1.07
RABGGTA-221ENST00000561055 RAB39AQ14964 217 aa8.35□□□□□ -1.07
RABGGTA-221ENST00000561055 PCK2Q16822 640 aa8.35□□□□□ -1.07
RABGGTA-221ENST00000561055 TEX30Q5JUR7 227 aa8.35□□□□□ -1.07
RABGGTA-221ENST00000561055 FBXW10Q5XX13 1052 aa8.35□□□□□ -1.07
RABGGTA-221ENST00000561055 ALKBH2Q6NS38 261 aa8.35□□□□□ -1.07
RABGGTA-221ENST00000561055 UGT2A3Q6UWM9 527 aa8.35□□□□□ -1.07
RABGGTA-221ENST00000561055 C20orf204Q6ZNR8 217 aa8.35□□□□□ -1.07
RABGGTA-221ENST00000561055 ZBTB49Q6ZSB9 765 aa8.35□□□□□ -1.07
RABGGTA-221ENST00000561055 DEPDC4Q8N2C3 294 aa8.35□□□□□ -1.07
RABGGTA-221ENST00000561055 CBR4Q8N4T8 237 aa8.35□□□□□ -1.07
RABGGTA-221ENST00000561055 CPEB3Q8NE35 698 aaKnown RBP8.35□□□□□ -1.07
RABGGTA-221ENST00000561055 OR4F15Q8NGB8 312 aa8.35□□□□□ -1.07
RABGGTA-221ENST00000561055 ZNRF4Q8WWF5 429 aa8.35□□□□□ -1.07
RABGGTA-221ENST00000561055 C11orf40Q8WZ69 217 aa8.35□□□□□ -1.07
RABGGTA-221ENST00000561055 HRASLS5Q96KN8 279 aa8.35□□□□□ -1.07
RABGGTA-221ENST00000561055 RDH12Q96NR8 316 aa8.35□□□□□ -1.07
RABGGTA-221ENST00000561055 SLC29A1Q99808 456 aa8.35□□□□□ -1.07
RABGGTA-221ENST00000561055 PRRG3Q9BZD7 231 aa8.35□□□□□ -1.07
RABGGTA-221ENST00000561055 GRIP2Q9C0E4 1043 aa8.35□□□□□ -1.07
RABGGTA-221ENST00000561055 OR2H1Q9GZK4 316 aa8.35□□□□□ -1.07
RABGGTA-221ENST00000561055 RNF121Q9H920 327 aa8.35□□□□□ -1.07
RABGGTA-221ENST00000561055 MARCH7Q9H992 704 aa8.35□□□□□ -1.07
RABGGTA-221ENST00000561055 CCNB1IP1Q9NPC3 277 aa8.35□□□□□ -1.07
RABGGTA-221ENST00000561055 MRPL22Q9NWU5 206 aaKnown RBP8.35□□□□□ -1.07
RABGGTA-221ENST00000561055 ATPIF1Q9UII2 106 aa8.35□□□□□ -1.07
RABGGTA-221ENST00000561055 KCNG2Q9UJ96 466 aa8.35□□□□□ -1.07
RABGGTA-221ENST00000561055 LHFPL6Q9Y693 200 aa8.35□□□□□ -1.07
RABGGTA-221ENST00000561055 IGHV2OR16-5A0A0B4J2B6 119 aa8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 IQCMA0A1B0GVH7 501 aa8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 PRR23D1E9PI22 279 aaPredicted RBP8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 GLCEO94923 617 aa8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 MPZL1O95297 269 aa8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 DANCRP0C864 163 aa8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 PRR23D2P0DMB1 279 aaPredicted RBP8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 PCSK6P29122 969 aa8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 CALCRP30988 508 aa8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 FMO3P31513 532 aa8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 GGT2P36268 569 aa8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 POLR2IP36954 125 aaKnown RBP8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 NKX6-1P78426 367 aaPredicted RBP8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 HGFACQ04756 655 aa8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 SPOCK1Q08629 439 aa8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 RCN1Q15293 331 aa8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 SNAPC1Q16533 368 aa8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 PABPC1L2AQ5JQF8 200 aa8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 SLC35D3Q5M8T2 416 aa8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 ZNF544Q6NX49 715 aa8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 SLC22A25Q6T423 547 aa8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 CPOQ8IVL8 374 aa8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 ALDH16A1Q8IZ83 802 aa8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 PACRGLQ8N7B6 248 aa8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 NUP37Q8NFH4 326 aa8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 GJC3Q8NFK1 279 aa8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 KBTBD8Q8NFY9 601 aa8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 OR1J2Q8NGS2 313 aa8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 TRUB1Q8WWH5 349 aaKnown RBP8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 AKAP1Q92667 903 aaKnown RBP eCLIP8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 NINJ1Q92982 152 aa8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 FBXW5Q969U6 566 aa8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 EME1Q96AY2 570 aa8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 MS4A3Q96HJ5 214 aa8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 POM121L2Q96KW2 1035 aa8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 HCAR1Q9BXC0 346 aa8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 WNT5BQ9H1J7 359 aa8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 RERGLQ9H628 205 aa8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 EMC7Q9NPA0 242 aa8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 HINT3Q9NQE9 182 aaKnown RBP8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 TVP23BQ9NYZ1 205 aa8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 CISD1Q9NZ45 108 aaKnown RBP8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 CYB5R1Q9UHQ9 305 aa8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 ORC6Q9Y5N6 252 aa8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 POLQO75417 2590 aa8.34□□□□□ -1.07
RABGGTA-221ENST00000561055 PRRC2AP48634 2157 aaKnown RBP8.34□□□□□ -1.08
RABGGTA-221ENST00000561055 CSMD2Q7Z408 3487 aa8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 LOC100509620A0A075B734 347 aa8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 FAM183AA6NL82 134 aa8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 E7EQL1 145 aa8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 ATP6V1G2-DDX39BF2Z307 99 aa8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 DLGAP1O14490 977 aa8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 SLC16A6O15403 523 aa8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 SGCEO43556 437 aa8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 SYNGR3O43761 229 aa8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 PRKYO43930 277 aa8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 GPANK1O95872 356 aa8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 CLUP10909 449 aa8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 NR4A1P22736 598 aa8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 STOMP27105 288 aa8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 PYCR1P32322 319 aa8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 DBPQ10586 325 aaPredicted RBP8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 CCDC92Q53HC0 331 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms