RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 SPRY3O43610 288 aa13.78□□□□□ -0.2
SNX1-213ENST00000561026 DEAF1O75398 565 aaPredicted RBP13.78□□□□□ -0.2
SNX1-213ENST00000561026 PRSS23O95084 383 aa13.78□□□□□ -0.2
SNX1-213ENST00000561026 ZNF682O95780 498 aa13.78□□□□□ -0.2
SNX1-213ENST00000561026 NGFP01138 241 aa13.78□□□□□ -0.2
SNX1-213ENST00000561026 MSR1P21757 451 aa13.78□□□□□ -0.2
SNX1-213ENST00000561026 LIPAP38571 399 aa13.78□□□□□ -0.2
SNX1-213ENST00000561026 SLC9A3P48764 834 aa13.78□□□□□ -0.2
SNX1-213ENST00000561026 PPP1CBP62140 327 aa13.78□□□□□ -0.2
SNX1-213ENST00000561026 ENDOGQ14249 297 aaKnown RBP13.78□□□□□ -0.2
SNX1-213ENST00000561026 IFI44LQ53G44 452 aa13.78□□□□□ -0.2
SNX1-213ENST00000561026 ZNF774Q6NX45 483 aa13.78□□□□□ -0.2
SNX1-213ENST00000561026 SHQ1Q6PI26 577 aaKnown RBP13.78□□□□□ -0.2
SNX1-213ENST00000561026 TBPL2Q6SJ96 375 aa13.78□□□□□ -0.2
SNX1-213ENST00000561026 ZNF730Q6ZMV8 503 aa13.78□□□□□ -0.2
SNX1-213ENST00000561026 RFPL4BQ6ZWI9 263 aa13.78□□□□□ -0.2
SNX1-213ENST00000561026 MBOAT2Q6ZWT7 520 aa13.78□□□□□ -0.2
SNX1-213ENST00000561026 CBLL1Q75N03 491 aa13.78□□□□□ -0.2
SNX1-213ENST00000561026 SYT9Q86SS6 491 aa13.78□□□□□ -0.2
SNX1-213ENST00000561026 FAM156AQ8NDB6 213 aa13.78□□□□□ -0.2
SNX1-213ENST00000561026 OR13C2Q8NGS9 318 aa13.78□□□□□ -0.2
SNX1-213ENST00000561026 ABHD4Q8TB40 342 aa13.78□□□□□ -0.2
SNX1-213ENST00000561026 ELMOD3Q96FG2 381 aa13.78□□□□□ -0.2
SNX1-213ENST00000561026 TIMD4Q96H15 378 aa13.78□□□□□ -0.2
SNX1-213ENST00000561026 C4orf45Q96LM5 186 aa13.78□□□□□ -0.2
SNX1-213ENST00000561026 HOPXQ9BPY8 73 aaPredicted RBP13.78□□□□□ -0.2
SNX1-213ENST00000561026 CCDC134Q9H6E4 229 aa13.78□□□□□ -0.2
SNX1-213ENST00000561026 G6PC2Q9NQR9 355 aa13.78□□□□□ -0.2
SNX1-213ENST00000561026 CYSLTR2Q9NS75 346 aa13.78□□□□□ -0.2
SNX1-213ENST00000561026 KLHL21Q9UJP4 597 aa13.78□□□□□ -0.2
SNX1-213ENST00000561026 A0A1W2PPL8 197 aa13.77□□□□□ -0.21
SNX1-213ENST00000561026 ZSCAN5BA6NJL1 495 aa13.77□□□□□ -0.21
SNX1-213ENST00000561026 C12orf71A8MTZ7 269 aa13.77□□□□□ -0.21
SNX1-213ENST00000561026 H3BSA7 217 aa13.77□□□□□ -0.21
SNX1-213ENST00000561026 CDC42EP2O14613 210 aa13.77□□□□□ -0.21
SNX1-213ENST00000561026 PLPP2O43688 288 aa13.77□□□□□ -0.21
SNX1-213ENST00000561026 MPZL1O95297 269 aa13.77□□□□□ -0.21
SNX1-213ENST00000561026 PNPP00491 289 aa13.77□□□□□ -0.21
SNX1-213ENST00000561026 ADH4P08319 380 aa13.77□□□□□ -0.21
SNX1-213ENST00000561026 COX4I1P13073 169 aa13.77□□□□□ -0.21
SNX1-213ENST00000561026 SCGB2A2Q13296 93 aa13.77□□□□□ -0.21
SNX1-213ENST00000561026 C1orf229Q6ZS94 237 aaPredicted RBP13.77□□□□□ -0.21
SNX1-213ENST00000561026 TMPRSS11FQ6ZWK6 438 aa13.77□□□□□ -0.21
SNX1-213ENST00000561026 FKBP9P1Q75LS8 142 aa13.77□□□□□ -0.21
SNX1-213ENST00000561026 CCL17Q92583 94 aa13.77□□□□□ -0.21
SNX1-213ENST00000561026 RAB1CQ92928 201 aa13.77□□□□□ -0.21
SNX1-213ENST00000561026 RAB39BQ96DA2 213 aa13.77□□□□□ -0.21
SNX1-213ENST00000561026 WACQ9BTA9 647 aa13.77□□□□□ -0.21
SNX1-213ENST00000561026 ELOVL3Q9HB03 270 aa13.77□□□□□ -0.21
SNX1-213ENST00000561026 POLE4Q9NR33 117 aa13.77□□□□□ -0.21
SNX1-213ENST00000561026 ZNF446Q9NWS9 450 aa13.77□□□□□ -0.21
SNX1-213ENST00000561026 GRHPRQ9UBQ7 328 aa13.77□□□□□ -0.21
SNX1-213ENST00000561026 CGGBP1Q9UFW8 167 aaPredicted RBP13.77□□□□□ -0.21
SNX1-213ENST00000561026 H7C1C5 153 aa13.76□□□□□ -0.21
SNX1-213ENST00000561026 HAX1O00165 279 aa13.76□□□□□ -0.21
SNX1-213ENST00000561026 NME4O00746 187 aa13.76□□□□□ -0.21
SNX1-213ENST00000561026 GSTA4O15217 222 aa13.76□□□□□ -0.21
SNX1-213ENST00000561026 UBOX5O94941 541 aa13.76□□□□□ -0.21
SNX1-213ENST00000561026 VENTXO95231 258 aa13.76□□□□□ -0.21
SNX1-213ENST00000561026 IGHV2-5P01817 119 aa13.76□□□□□ -0.21
SNX1-213ENST00000561026 SCG5P05408 212 aa13.76□□□□□ -0.21
SNX1-213ENST00000561026 CD14P08571 375 aa13.76□□□□□ -0.21
SNX1-213ENST00000561026 ZNF26P17031 533 aaPredicted RBP13.76□□□□□ -0.21
SNX1-213ENST00000561026 RPL4P36578 427 aaKnown RBP13.76□□□□□ -0.21
SNX1-213ENST00000561026 GPR4P46093 362 aa13.76□□□□□ -0.21
SNX1-213ENST00000561026 ARHGDIAP52565 204 aa13.76□□□□□ -0.21
SNX1-213ENST00000561026 SLC7A2P52569 658 aa13.76□□□□□ -0.21
SNX1-213ENST00000561026 LCN6P62502 163 aa13.76□□□□□ -0.21
SNX1-213ENST00000561026 ZBED5Q49AG3 693 aa13.76□□□□□ -0.21
SNX1-213ENST00000561026 C8orf82Q6P1X6 216 aaPredicted RBP13.76□□□□□ -0.21
SNX1-213ENST00000561026 ARL9Q6T311 187 aa13.76□□□□□ -0.21
SNX1-213ENST00000561026 HSH2DQ96JZ2 352 aa13.76□□□□□ -0.21
SNX1-213ENST00000561026 EGLN1Q9GZT9 426 aa13.76□□□□□ -0.21
SNX1-213ENST00000561026 NMNAT1Q9HAN9 279 aaPredicted RBP13.76□□□□□ -0.21
SNX1-213ENST00000561026 ZDHHC8Q9ULC8 765 aa13.76□□□□□ -0.21
SNX1-213ENST00000561026 NDRG4Q9ULP0 352 aaKnown RBP13.76□□□□□ -0.21
SNX1-213ENST00000561026 ADAM18Q9Y3Q7 739 aa13.76□□□□□ -0.21
SNX1-213ENST00000561026 AHCYL1O43865 530 aa13.75□□□□□ -0.21
SNX1-213ENST00000561026 SERPINA1P01009 418 aa13.75□□□□□ -0.21
SNX1-213ENST00000561026 AVPP01185 164 aa13.75□□□□□ -0.21
SNX1-213ENST00000561026 RRM2BQ7LG56 351 aa13.75□□□□□ -0.21
SNX1-213ENST00000561026 FAM122BQ7Z309 247 aa13.75□□□□□ -0.21
SNX1-213ENST00000561026 TSEN54Q7Z6J9 526 aaKnown RBP13.75□□□□□ -0.21
SNX1-213ENST00000561026 TEX29Q8N6K0 151 aa13.75□□□□□ -0.21
SNX1-213ENST00000561026 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.75□□□□□ -0.21
SNX1-213ENST00000561026 SEMA6DQ8NFY4 1073 aa13.75□□□□□ -0.21
SNX1-213ENST00000561026 ZFAND2BQ8WV99 257 aa13.75□□□□□ -0.21
SNX1-213ENST00000561026 Q96M85 177 aa13.75□□□□□ -0.21
SNX1-213ENST00000561026 DIRC2Q96SL1 478 aa13.75□□□□□ -0.21
SNX1-213ENST00000561026 ANKRD19PQ9H560 264 aa13.75□□□□□ -0.21
SNX1-213ENST00000561026 EFCAB1Q9HAE3 211 aa13.75□□□□□ -0.21
SNX1-213ENST00000561026 EMC7Q9NPA0 242 aa13.75□□□□□ -0.21
SNX1-213ENST00000561026 LOC105371242A0A075B767 164 aa13.74□□□□□ -0.21
SNX1-213ENST00000561026 A0A0G2JMP0 313 aa13.74□□□□□ -0.21
SNX1-213ENST00000561026 A0A0X1KG70 313 aa13.74□□□□□ -0.21
SNX1-213ENST00000561026 PRSS37A4D1T9 235 aa13.74□□□□□ -0.21
SNX1-213ENST00000561026 XKRYO14609 159 aa13.74□□□□□ -0.21
SNX1-213ENST00000561026 CCDC22O60826 627 aa13.74□□□□□ -0.21
SNX1-213ENST00000561026 ABHD16AO95870 558 aa13.74□□□□□ -0.21
SNX1-213ENST00000561026 CD55P08174 381 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms