RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 TSSK6Q9BXA6 273 aa13.16□□□□□ -0.3
SNRPA1-213ENST00000560856 KCNN2Q9H2S1 579 aa13.16□□□□□ -0.3
SNRPA1-213ENST00000560856 C1orf198Q9H425 327 aa13.16□□□□□ -0.3
SNRPA1-213ENST00000560856 YY1AP1Q9H869 796 aa13.16□□□□□ -0.3
SNRPA1-213ENST00000560856 CCNB1IP1Q9NPC3 277 aa13.16□□□□□ -0.3
SNRPA1-213ENST00000560856 TIMM10BQ9Y5J6 103 aa13.16□□□□□ -0.3
SNRPA1-213ENST00000560856 CSPG4Q6UVK1 2322 aa13.16□□□□□ -0.3
SNRPA1-213ENST00000560856 IQCMA0A1B0GVH7 501 aa13.15□□□□□ -0.3
SNRPA1-213ENST00000560856 C12orf71A8MTZ7 269 aa13.15□□□□□ -0.3
SNRPA1-213ENST00000560856 TIPRLO75663 272 aa13.15□□□□□ -0.3
SNRPA1-213ENST00000560856 SOX14O95416 240 aa13.15□□□□□ -0.3
SNRPA1-213ENST00000560856 PTHP01270 115 aa13.15□□□□□ -0.3
SNRPA1-213ENST00000560856 PRKACGP22612 351 aa13.15□□□□□ -0.3
SNRPA1-213ENST00000560856 CRABP1P29762 137 aa13.15□□□□□ -0.3
SNRPA1-213ENST00000560856 GUCA1AP43080 201 aaPredicted RBP13.15□□□□□ -0.3
SNRPA1-213ENST00000560856 LSM6P62312 80 aaKnown RBP13.15□□□□□ -0.3
SNRPA1-213ENST00000560856 HSF2Q03933 536 aa13.15□□□□□ -0.3
SNRPA1-213ENST00000560856 PLP2Q04941 152 aa13.15□□□□□ -0.3
SNRPA1-213ENST00000560856 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.15□□□□□ -0.3
SNRPA1-213ENST00000560856 CIARTQ8N365 385 aaPredicted RBP13.15□□□□□ -0.3
SNRPA1-213ENST00000560856 SDR9C7Q8NEX9 313 aa13.15□□□□□ -0.3
SNRPA1-213ENST00000560856 OR52L1Q8NGH7 329 aa13.15□□□□□ -0.3
SNRPA1-213ENST00000560856 OR52E2Q8NGJ4 325 aa13.15□□□□□ -0.3
SNRPA1-213ENST00000560856 C11orf40Q8WZ69 217 aa13.15□□□□□ -0.3
SNRPA1-213ENST00000560856 WACQ9BTA9 647 aa13.15□□□□□ -0.3
SNRPA1-213ENST00000560856 RACGAP1Q9H0H5 632 aa13.15□□□□□ -0.3
SNRPA1-213ENST00000560856 RERGLQ9H628 205 aa13.15□□□□□ -0.3
SNRPA1-213ENST00000560856 SRA1Q9HD15 236 aaKnown RBP13.15□□□□□ -0.3
SNRPA1-213ENST00000560856 ARMC1Q9NVT9 282 aa13.15□□□□□ -0.3
SNRPA1-213ENST00000560856 PDP1Q9P0J1 537 aaPredicted RBP13.15□□□□□ -0.3
SNRPA1-213ENST00000560856 FKBP7Q9Y680 259 aa13.15□□□□□ -0.3
SNRPA1-213ENST00000560856 TRIM64A6NGJ6 449 aa13.14□□□□□ -0.31
SNRPA1-213ENST00000560856 TRIM64BA6NI03 449 aa13.14□□□□□ -0.31
SNRPA1-213ENST00000560856 GNGT2O14610 69 aa13.14□□□□□ -0.31
SNRPA1-213ENST00000560856 RENP00797 406 aa13.14□□□□□ -0.31
SNRPA1-213ENST00000560856 TFP02787 698 aa13.14□□□□□ -0.31
SNRPA1-213ENST00000560856 STOMP27105 288 aa13.14□□□□□ -0.31
SNRPA1-213ENST00000560856 PCSK6P29122 969 aa13.14□□□□□ -0.31
SNRPA1-213ENST00000560856 NOS3P29474 1203 aa13.14□□□□□ -0.31
SNRPA1-213ENST00000560856 WNT5AP41221 380 aa13.14□□□□□ -0.31
SNRPA1-213ENST00000560856 PCBD1P61457 104 aa13.14□□□□□ -0.31
SNRPA1-213ENST00000560856 TBC1D28Q2M2D7 210 aa13.14□□□□□ -0.31
SNRPA1-213ENST00000560856 C1orf146Q5VVC0 180 aa13.14□□□□□ -0.31
SNRPA1-213ENST00000560856 ZNF774Q6NX45 483 aa13.14□□□□□ -0.31
SNRPA1-213ENST00000560856 CCDC121Q6ZUS5 278 aa13.14□□□□□ -0.31
SNRPA1-213ENST00000560856 LRP11Q86VZ4 500 aa13.14□□□□□ -0.31
SNRPA1-213ENST00000560856 JAZF1Q86VZ6 243 aa13.14□□□□□ -0.31
SNRPA1-213ENST00000560856 CYB561A3Q8NBI2 242 aa13.14□□□□□ -0.31
SNRPA1-213ENST00000560856 SLC26A10Q8NG04 563 aa13.14□□□□□ -0.31
SNRPA1-213ENST00000560856 OR1J2Q8NGS2 313 aa13.14□□□□□ -0.31
SNRPA1-213ENST00000560856 ZNRF4Q8WWF5 429 aa13.14□□□□□ -0.31
SNRPA1-213ENST00000560856 MRPL24Q96A35 216 aaKnown RBP13.14□□□□□ -0.31
SNRPA1-213ENST00000560856 MRPL37Q9BZE1 423 aaKnown RBP13.14□□□□□ -0.31
SNRPA1-213ENST00000560856 FN3KQ9H479 309 aa13.14□□□□□ -0.31
SNRPA1-213ENST00000560856 CDH20Q9HBT6 801 aa13.14□□□□□ -0.31
SNRPA1-213ENST00000560856 RPRD1BQ9NQG5 326 aaKnown RBP13.14□□□□□ -0.31
SNRPA1-213ENST00000560856 TBC1D23Q9NUY8 699 aa13.14□□□□□ -0.31
SNRPA1-213ENST00000560856 CMAHPQ9Y471 501 aa13.14□□□□□ -0.31
SNRPA1-213ENST00000560856 SPEF1Q9Y4P9 236 aa13.14□□□□□ -0.31
SNRPA1-213ENST00000560856 PMF1-BGLAPU3KQ54 211 aa13.14□□□□□ -0.31
SNRPA1-213ENST00000560856 ZANQ9Y493 2812 aa13.14□□□□□ -0.31
SNRPA1-213ENST00000560856 APLNRP35414 380 aa13.13□□□□□ -0.31
SNRPA1-213ENST00000560856 EVX1P49640 407 aa13.13□□□□□ -0.31
SNRPA1-213ENST00000560856 UCP2P55851 309 aa13.13□□□□□ -0.31
SNRPA1-213ENST00000560856 HIST1H3AP68431 136 aa13.13□□□□□ -0.31
SNRPA1-213ENST00000560856 GALK2Q01415 458 aa13.13□□□□□ -0.31
SNRPA1-213ENST00000560856 MEP1BQ16820 701 aa13.13□□□□□ -0.31
SNRPA1-213ENST00000560856 SLC36A3Q495N2 470 aa13.13□□□□□ -0.31
SNRPA1-213ENST00000560856 CCDC92Q53HC0 331 aaPredicted RBP13.13□□□□□ -0.31
SNRPA1-213ENST00000560856 HIST2H3PS2Q5TEC6 136 aa13.13□□□□□ -0.31
SNRPA1-213ENST00000560856 SHQ1Q6PI26 577 aaKnown RBP13.13□□□□□ -0.31
SNRPA1-213ENST00000560856 DNM1P34Q6PK57 102 aa13.13□□□□□ -0.31
SNRPA1-213ENST00000560856 HIST2H3AQ71DI3 136 aa13.13□□□□□ -0.31
SNRPA1-213ENST00000560856 SVOPLQ8N434 492 aa13.13□□□□□ -0.31
SNRPA1-213ENST00000560856 SLC37A3Q8NCC5 494 aa13.13□□□□□ -0.31
SNRPA1-213ENST00000560856 NRBF2Q96F24 287 aa13.13□□□□□ -0.31
SNRPA1-213ENST00000560856 SORCS2Q96PQ0 1159 aa13.13□□□□□ -0.31
SNRPA1-213ENST00000560856 RBM4Q9BWF3 364 aaKnown RBP13.13□□□□□ -0.31
SNRPA1-213ENST00000560856 NMNAT2Q9BZQ4 307 aa13.13□□□□□ -0.31
SNRPA1-213ENST00000560856 BAIAP2Q9UQB8 552 aa13.13□□□□□ -0.31
SNRPA1-213ENST00000560856 LHFPL6Q9Y693 200 aa13.13□□□□□ -0.31
SNRPA1-213ENST00000560856 FAM171A2A8MVW0 826 aa13.12□□□□□ -0.31
SNRPA1-213ENST00000560856 VSTM5A8MXK1 200 aa13.12□□□□□ -0.31
SNRPA1-213ENST00000560856 SYNGR3O43761 229 aa13.12□□□□□ -0.31
SNRPA1-213ENST00000560856 ICMTO60725 284 aa13.12□□□□□ -0.31
SNRPA1-213ENST00000560856 DEAF1O75398 565 aaPredicted RBP13.12□□□□□ -0.31
SNRPA1-213ENST00000560856 E2F6O75461 281 aa13.12□□□□□ -0.31
SNRPA1-213ENST00000560856 FAM157BP0CG42 384 aa13.12□□□□□ -0.31
SNRPA1-213ENST00000560856 COX5BP10606 129 aa13.12□□□□□ -0.31
SNRPA1-213ENST00000560856 ANXA8P13928 327 aa13.12□□□□□ -0.31
SNRPA1-213ENST00000560856 FOSL1P15407 271 aa13.12□□□□□ -0.31
SNRPA1-213ENST00000560856 ERVS71-1P61550 626 aa13.12□□□□□ -0.31
SNRPA1-213ENST00000560856 SNRPD2P62316 118 aaKnown RBP13.12□□□□□ -0.31
SNRPA1-213ENST00000560856 SCRN3Q0VDG4 424 aa13.12□□□□□ -0.31
SNRPA1-213ENST00000560856 TNK1Q13470 666 aa13.12□□□□□ -0.31
SNRPA1-213ENST00000560856 AQP6Q13520 282 aa13.12□□□□□ -0.31
SNRPA1-213ENST00000560856 RAB35Q15286 201 aa13.12□□□□□ -0.31
SNRPA1-213ENST00000560856 ATP6AP1Q15904 470 aa13.12□□□□□ -0.31
SNRPA1-213ENST00000560856 CLEC12BQ2HXU8 276 aa13.12□□□□□ -0.31
SNRPA1-213ENST00000560856 ACSM5Q6NUN0 579 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms