RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 BCL2L14Q9BZR8 327 aa11.17□□□□□ -0.62
CTDSPL2-209ENST00000560620 OR2H1Q9GZK4 316 aa11.17□□□□□ -0.62
CTDSPL2-209ENST00000560620 NUAK2Q9H093 628 aa11.17□□□□□ -0.62
CTDSPL2-209ENST00000560620 REV1Q9UBZ9 1251 aa11.17□□□□□ -0.62
CTDSPL2-209ENST00000560620 GPR160Q9UJ42 338 aa11.17□□□□□ -0.62
CTDSPL2-209ENST00000560620 COA3Q9Y2R0 106 aaPredicted RBP11.17□□□□□ -0.62
CTDSPL2-209ENST00000560620 SAMHD1Q9Y3Z3 626 aaKnown RBP11.17□□□□□ -0.62
CTDSPL2-209ENST00000560620 TMEM129A0AVI4 362 aa11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 IMPA2O14732 288 aa11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 SNAP29O95721 258 aa11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 CST1P01037 141 aa11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 RAP2AP10114 183 aa11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 APEHP13798 732 aaKnown RBP11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 SLC25A16P16260 332 aa11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 CRABP1P29762 137 aa11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 CDKN2AP42771 156 aaKnown RBP11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 ALDH3B1P43353 468 aa11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 MAGEA2P43356 314 aa11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 GSSP48637 474 aa11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 KLF3P57682 345 aaPredicted RBP11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 ERVS71-1P61550 626 aa11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 PPP2R2BQ00005 443 aa11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 TRAP1Q12931 704 aaKnown RBP11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 ENDOGQ14249 297 aaKnown RBP11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 FLOT2Q14254 428 aa11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 MAD2L1BPQ15013 274 aaPredicted RBP11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 SLC35F1Q5T1Q4 408 aa11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 OTPQ5XKR4 325 aa11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 RPL13AP3Q6NVV1 102 aa11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 ARL9Q6T311 187 aa11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 UGT2A3Q6UWM9 527 aa11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 DNM1P46Q6ZS02 220 aa11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 FOXL2NBQ6ZUU3 175 aa11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 AQP11Q8NBQ7 271 aa11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 OR10H5Q8NGA6 315 aa11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 OR4K13Q8NH42 304 aa11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 SYNPRQ8TBG9 265 aa11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 C10orf105Q8TEF2 133 aa11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 TSSK2Q96PF2 358 aa11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 NMNAT3Q96T66 252 aa11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 BTBD10Q9BSF8 475 aa11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 CHID1Q9BWS9 393 aa11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 WNT5BQ9H1J7 359 aa11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 MS4A5Q9H3V2 200 aa11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 EGLN3Q9H6Z9 239 aa11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 SRA1Q9HD15 236 aaKnown RBP11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 MYOZ1Q9NP98 299 aaPredicted RBP11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 TBC1D23Q9NUY8 699 aa11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 VSX1Q9NZR4 365 aaPredicted RBP11.16□□□□□ -0.62
CTDSPL2-209ENST00000560620 DHRS12A0PJE2 317 aa11.15□□□□□ -0.62
CTDSPL2-209ENST00000560620 ACOT8O14734 319 aa11.15□□□□□ -0.62
CTDSPL2-209ENST00000560620 SGCEO43556 437 aa11.15□□□□□ -0.62
CTDSPL2-209ENST00000560620 DOK2O60496 412 aa11.15□□□□□ -0.62
CTDSPL2-209ENST00000560620 DNAJC8O75937 253 aaPredicted RBP11.15□□□□□ -0.62
CTDSPL2-209ENST00000560620 MPZL1O95297 269 aa11.15□□□□□ -0.62
CTDSPL2-209ENST00000560620 TXNDC12O95881 172 aa11.15□□□□□ -0.62
CTDSPL2-209ENST00000560620 CLPTM1O96005 669 aa11.15□□□□□ -0.62
CTDSPL2-209ENST00000560620 GASTP01350 101 aa11.15□□□□□ -0.62
CTDSPL2-209ENST00000560620 HLA-DQA2P01906 255 aa11.15□□□□□ -0.62
CTDSPL2-209ENST00000560620 SCG5P05408 212 aa11.15□□□□□ -0.62
CTDSPL2-209ENST00000560620 DAOP14920 347 aa11.15□□□□□ -0.62
CTDSPL2-209ENST00000560620 HIST1H1CP16403 213 aaKnown RBP11.15□□□□□ -0.62
CTDSPL2-209ENST00000560620 PCSK6P29122 969 aa11.15□□□□□ -0.62
CTDSPL2-209ENST00000560620 GCH1P30793 250 aa11.15□□□□□ -0.62
CTDSPL2-209ENST00000560620 HTR5AP47898 357 aa11.15□□□□□ -0.62
CTDSPL2-209ENST00000560620 EVX1P49640 407 aa11.15□□□□□ -0.62
CTDSPL2-209ENST00000560620 ERFP50548 548 aa11.15□□□□□ -0.62
CTDSPL2-209ENST00000560620 HMGA2P52926 109 aa11.15□□□□□ -0.62
CTDSPL2-209ENST00000560620 SCRN3Q0VDG4 424 aa11.15□□□□□ -0.62
CTDSPL2-209ENST00000560620 AQP6Q13520 282 aa11.15□□□□□ -0.62
CTDSPL2-209ENST00000560620 GGTLC2Q14390 218 aa11.15□□□□□ -0.62
CTDSPL2-209ENST00000560620 MSMPQ1L6U9 139 aa11.15□□□□□ -0.62
CTDSPL2-209ENST00000560620 MICAQ29983 383 aa11.15□□□□□ -0.62
CTDSPL2-209ENST00000560620 SPATA46Q5T0L3 261 aa11.15□□□□□ -0.62
CTDSPL2-209ENST00000560620 ZNF620Q6ZNG0 422 aa11.15□□□□□ -0.62
CTDSPL2-209ENST00000560620 SYT9Q86SS6 491 aa11.15□□□□□ -0.62
CTDSPL2-209ENST00000560620 SDR9C7Q8NEX9 313 aa11.15□□□□□ -0.62
CTDSPL2-209ENST00000560620 OR52E2Q8NGJ4 325 aa11.15□□□□□ -0.62
CTDSPL2-209ENST00000560620 SNX33Q8WV41 574 aa11.15□□□□□ -0.62
CTDSPL2-209ENST00000560620 NEU4Q8WWR8 484 aaPredicted RBP11.15□□□□□ -0.62
CTDSPL2-209ENST00000560620 POM121L2Q96KW2 1035 aa11.15□□□□□ -0.62
CTDSPL2-209ENST00000560620 RPRD1BQ9NQG5 326 aaKnown RBP11.15□□□□□ -0.62
CTDSPL2-209ENST00000560620 PLEK2Q9NYT0 353 aa11.15□□□□□ -0.62
CTDSPL2-209ENST00000560620 TAAR3PQ9P1P4 343 aa11.15□□□□□ -0.62
CTDSPL2-209ENST00000560620 MYEF2Q9P2K5 600 aaKnown RBP11.15□□□□□ -0.62
CTDSPL2-209ENST00000560620 ASH2LQ9UBL3 628 aa11.15□□□□□ -0.62
CTDSPL2-209ENST00000560620 CDH10Q9Y6N8 788 aa11.15□□□□□ -0.62
CTDSPL2-209ENST00000560620 MTORP42345 2549 aa11.15□□□□□ -0.62
CTDSPL2-209ENST00000560620 LOC100509620A0A075B734 347 aa11.14□□□□□ -0.63
CTDSPL2-209ENST00000560620 LOC390937A0A1W2PQ73 354 aa11.14□□□□□ -0.63
CTDSPL2-209ENST00000560620 AQP12BA6NM10 295 aa11.14□□□□□ -0.63
CTDSPL2-209ENST00000560620 ARPC3O15145 178 aa11.14□□□□□ -0.63
CTDSPL2-209ENST00000560620 IDH3BO43837 385 aa11.14□□□□□ -0.63
CTDSPL2-209ENST00000560620 E2F6O75461 281 aa11.14□□□□□ -0.63
CTDSPL2-209ENST00000560620 ABHD16AO95870 558 aa11.14□□□□□ -0.63
CTDSPL2-209ENST00000560620 GPANK1O95872 356 aa11.14□□□□□ -0.63
CTDSPL2-209ENST00000560620 MT-ND5P03915 603 aa11.14□□□□□ -0.63
CTDSPL2-209ENST00000560620 NAT2P11245 290 aa11.14□□□□□ -0.63
CTDSPL2-209ENST00000560620 ARHGDIAP52565 204 aa11.14□□□□□ -0.63
CTDSPL2-209ENST00000560620 GLO1Q04760 184 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms