RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 C16orf87Q6PH81 154 aa8.84□□□□□ -0.99
CDC42BPB-207ENST00000560492 ARL9Q6T311 187 aa8.84□□□□□ -0.99
CDC42BPB-207ENST00000560492 RFPL4BQ6ZWI9 263 aa8.84□□□□□ -0.99
CDC42BPB-207ENST00000560492 ZER1Q7Z7L7 766 aa8.84□□□□□ -0.99
CDC42BPB-207ENST00000560492 SLC26A7Q8TE54 656 aa8.84□□□□□ -0.99
CDC42BPB-207ENST00000560492 ADAMTS16Q8TE57 1224 aa8.84□□□□□ -0.99
CDC42BPB-207ENST00000560492 ARHGDIGQ99819 225 aa8.84□□□□□ -0.99
CDC42BPB-207ENST00000560492 PKP2Q99959 881 aa8.84□□□□□ -0.99
CDC42BPB-207ENST00000560492 WFDC6Q9BQY6 131 aa8.84□□□□□ -0.99
CDC42BPB-207ENST00000560492 RSPO3Q9BXY4 272 aaPredicted RBP8.84□□□□□ -0.99
CDC42BPB-207ENST00000560492 EVA1AQ9H8M9 152 aa8.84□□□□□ -0.99
CDC42BPB-207ENST00000560492 SIAEQ9HAT2 523 aa8.84□□□□□ -0.99
CDC42BPB-207ENST00000560492 ELOVL3Q9HB03 270 aa8.84□□□□□ -0.99
CDC42BPB-207ENST00000560492 BEX1Q9HBH7 125 aa8.84□□□□□ -0.99
CDC42BPB-207ENST00000560492 SLCO1B3Q9NPD5 702 aa8.84□□□□□ -0.99
CDC42BPB-207ENST00000560492 ZNF229Q9UJW7 825 aa8.84□□□□□ -0.99
CDC42BPB-207ENST00000560492 CORO2BQ9UQ03 480 aa8.84□□□□□ -0.99
CDC42BPB-207ENST00000560492 SOX21Q9Y651 276 aaPredicted RBP8.84□□□□□ -0.99
CDC42BPB-207ENST00000560492 VWFP04275 2813 aa8.83□□□□□ -1
CDC42BPB-207ENST00000560492 A0A1W2PPL8 197 aa8.83□□□□□ -1
CDC42BPB-207ENST00000560492 TRAPPC13A5PLN9 417 aa8.83□□□□□ -1
CDC42BPB-207ENST00000560492 RRP9O43818 475 aaKnown RBP8.83□□□□□ -1
CDC42BPB-207ENST00000560492 TRMUO75648 421 aaKnown RBP8.83□□□□□ -1
CDC42BPB-207ENST00000560492 ABHD16AO95870 558 aa8.83□□□□□ -1
CDC42BPB-207ENST00000560492 MMP7P09237 267 aaPredicted RBP8.83□□□□□ -1
CDC42BPB-207ENST00000560492 RPS2P15880 293 aaKnown RBP8.83□□□□□ -1
CDC42BPB-207ENST00000560492 ACADSP16219 412 aa8.83□□□□□ -1
CDC42BPB-207ENST00000560492 CD247P20963 164 aa8.83□□□□□ -1
CDC42BPB-207ENST00000560492 GSTM3P21266 225 aa8.83□□□□□ -1
CDC42BPB-207ENST00000560492 SLC6A9P48067 706 aa8.83□□□□□ -1
CDC42BPB-207ENST00000560492 SLC18A1P54219 525 aa8.83□□□□□ -1
CDC42BPB-207ENST00000560492 RAG2P55895 527 aa8.83□□□□□ -1
CDC42BPB-207ENST00000560492 GNB2P62879 340 aa8.83□□□□□ -1
CDC42BPB-207ENST00000560492 FMODQ06828 376 aa8.83□□□□□ -1
CDC42BPB-207ENST00000560492 RPL18Q07020 188 aaKnown RBP8.83□□□□□ -1
CDC42BPB-207ENST00000560492 TOP3AQ13472 1001 aaPredicted RBP8.83□□□□□ -1
CDC42BPB-207ENST00000560492 MPP2Q14168 576 aa8.83□□□□□ -1
CDC42BPB-207ENST00000560492 ZMYND11Q15326 602 aa8.83□□□□□ -1
CDC42BPB-207ENST00000560492 CYP51A1Q16850 503 aa8.83□□□□□ -1
CDC42BPB-207ENST00000560492 NRN1LQ496H8 165 aa8.83□□□□□ -1
CDC42BPB-207ENST00000560492 TMEM155Q4W5P6 130 aa8.83□□□□□ -1
CDC42BPB-207ENST00000560492 TMEM255AQ5JRV8 349 aa8.83□□□□□ -1
CDC42BPB-207ENST00000560492 MBNL2Q5VZF2 373 aaKnown RBP8.83□□□□□ -1
CDC42BPB-207ENST00000560492 C10orf111Q8N326 155 aa8.83□□□□□ -1
CDC42BPB-207ENST00000560492 OR4F5Q8NH21 305 aa8.83□□□□□ -1
CDC42BPB-207ENST00000560492 ITLN1Q8WWA0 313 aa8.83□□□□□ -1
CDC42BPB-207ENST00000560492 ASB10Q8WXI3 467 aa8.83□□□□□ -1
CDC42BPB-207ENST00000560492 SPDL1Q96EA4 605 aa8.83□□□□□ -1
CDC42BPB-207ENST00000560492 POM121L2Q96KW2 1035 aa8.83□□□□□ -1
CDC42BPB-207ENST00000560492 SSBP3Q9BWW4 388 aaPredicted RBP8.83□□□□□ -1
CDC42BPB-207ENST00000560492 MARCH7Q9H992 704 aa8.83□□□□□ -1
CDC42BPB-207ENST00000560492 INIPQ9NRY2 104 aa8.83□□□□□ -1
CDC42BPB-207ENST00000560492 SLC25A37Q9NYZ2 338 aa8.83□□□□□ -1
CDC42BPB-207ENST00000560492 CCDC167Q9P0B6 97 aa8.83□□□□□ -1
CDC42BPB-207ENST00000560492 SLAMF8Q9P0V8 285 aa8.83□□□□□ -1
CDC42BPB-207ENST00000560492 PPP1R3CQ9UQK1 317 aa8.83□□□□□ -1
CDC42BPB-207ENST00000560492 TRRAPQ9Y4A5 3859 aa8.82□□□□□ -1
CDC42BPB-207ENST00000560492 LOC100509620A0A075B734 347 aa8.82□□□□□ -1
CDC42BPB-207ENST00000560492 A0A1B0GUS0 222 aa8.82□□□□□ -1
CDC42BPB-207ENST00000560492 CLDN34H7C241 214 aa8.82□□□□□ -1
CDC42BPB-207ENST00000560492 TIMM23O14925 209 aa8.82□□□□□ -1
CDC42BPB-207ENST00000560492 SURF4O15260 269 aa8.82□□□□□ -1
CDC42BPB-207ENST00000560492 ZNF205O95201 554 aa8.82□□□□□ -1
CDC42BPB-207ENST00000560492 NGFP01138 241 aa8.82□□□□□ -1
CDC42BPB-207ENST00000560492 CD55P08174 381 aa8.82□□□□□ -1
CDC42BPB-207ENST00000560492 NR2C1P13056 603 aa8.82□□□□□ -1
CDC42BPB-207ENST00000560492 MDH2P40926 338 aaKnown RBP8.82□□□□□ -1
CDC42BPB-207ENST00000560492 MRPS34P82930 218 aaKnown RBP8.82□□□□□ -1
CDC42BPB-207ENST00000560492 PSG4Q00888 419 aa8.82□□□□□ -1
CDC42BPB-207ENST00000560492 RUNDC3AQ59EK9 446 aa8.82□□□□□ -1
CDC42BPB-207ENST00000560492 FIP1L1Q6UN15 594 aaKnown RBP8.82□□□□□ -1
CDC42BPB-207ENST00000560492 BRD3OSQ6XYD6 125 aa8.82□□□□□ -1
CDC42BPB-207ENST00000560492 C1QL4Q86Z23 238 aa8.82□□□□□ -1
CDC42BPB-207ENST00000560492 RBM45Q8IUH3 476 aaKnown RBP8.82□□□□□ -1
CDC42BPB-207ENST00000560492 C1orf174Q8IYL3 243 aa8.82□□□□□ -1
CDC42BPB-207ENST00000560492 MUC20Q8N307 709 aaPredicted RBP8.82□□□□□ -1
CDC42BPB-207ENST00000560492 ATG16L2Q8NAA4 619 aa8.82□□□□□ -1
CDC42BPB-207ENST00000560492 C11orf65Q8NCR3 313 aa8.82□□□□□ -1
CDC42BPB-207ENST00000560492 OR6T1Q8NGN1 323 aa8.82□□□□□ -1
CDC42BPB-207ENST00000560492 WFDC12Q8WWY7 111 aa8.82□□□□□ -1
CDC42BPB-207ENST00000560492 PLEKHA8Q96JA3 519 aa8.82□□□□□ -1
CDC42BPB-207ENST00000560492 MAELQ96JY0 434 aaKnown RBP8.82□□□□□ -1
CDC42BPB-207ENST00000560492 C4orf45Q96LM5 186 aa8.82□□□□□ -1
CDC42BPB-207ENST00000560492 SLC30A2Q9BRI3 323 aa8.82□□□□□ -1
CDC42BPB-207ENST00000560492 OR2H1Q9GZK4 316 aa8.82□□□□□ -1
CDC42BPB-207ENST00000560492 MMP27Q9H306 513 aa8.82□□□□□ -1
CDC42BPB-207ENST00000560492 TMEM38AQ9H6F2 299 aa8.82□□□□□ -1
CDC42BPB-207ENST00000560492 PDP1Q9P0J1 537 aaPredicted RBP8.82□□□□□ -1
CDC42BPB-207ENST00000560492 VAPAQ9P0L0 249 aa8.82□□□□□ -1
CDC42BPB-207ENST00000560492 STX18Q9P2W9 335 aaKnown RBP8.82□□□□□ -1
CDC42BPB-207ENST00000560492 LRCH1Q9Y2L9 728 aa8.82□□□□□ -1
CDC42BPB-207ENST00000560492 GMNCA6NCL1 334 aa8.81□□□□□ -1
CDC42BPB-207ENST00000560492 CEACAM18A8MTB9 384 aa8.81□□□□□ -1
CDC42BPB-207ENST00000560492 A8MXK9 166 aa8.81□□□□□ -1
CDC42BPB-207ENST00000560492 H3BSA7 217 aa8.81□□□□□ -1
CDC42BPB-207ENST00000560492 M0QX08 132 aa8.81□□□□□ -1
CDC42BPB-207ENST00000560492 MGRN1O60291 552 aa8.81□□□□□ -1
CDC42BPB-207ENST00000560492 SNNO75324 88 aaPredicted RBP8.81□□□□□ -1
CDC42BPB-207ENST00000560492 ADH4P08319 380 aa8.81□□□□□ -1
CDC42BPB-207ENST00000560492 ASAH2BP0C7U1 165 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms