RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 FAM189BP81408 668 aa12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 WDR73Q6P4I2 378 aa12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 ETV3LQ6ZN32 361 aa12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 LILRB1Q8NHL6 650 aaPredicted RBP12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 RXFP4Q8TDU9 374 aa12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 MRPL13Q9BYD1 178 aaKnown RBP12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 STARD5Q9NSY2 213 aa12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 HEPACAM2A8MVW5 462 aa12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 ALX3O95076 343 aa12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 CALCBP10092 127 aa12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 CD1BP29016 333 aa12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 EPHA2P29317 976 aa12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 ZNF141Q15928 474 aa12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 OR2T8A6NH00 312 aa12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 K7ERU9 68 aa12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 CPEP16870 476 aa12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 NXNL2Q5VZ03 156 aa12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 OR52I1Q8NGK6 324 aa12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 SDR39U1Q9NRG7 319 aaPredicted RBP12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 TRAV36DV7A0A075B6V5 113 aa12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 M0R1X1 148 aa12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 PEX10O60683 326 aa12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 EXOSC7Q15024 291 aaKnown RBP12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 DCAF12Q5T6F0 453 aa12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 SHISA6Q6ZSJ9 500 aa12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 OR4C16Q8NGL9 310 aa12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 COMMD5Q9GZQ3 224 aa12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 XYLT2Q9H1B5 865 aa12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 TRABD2BA6NFA1 517 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 CSO75390 466 aaKnown RBP12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 ATP1B1P05026 303 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 C21orf33P30042 268 aaPredicted RBP12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 GPX7Q96SL4 187 aaPredicted RBP12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 A0A0G2JLL6 359 aaPredicted RBP12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 CRYBA1P05813 215 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 PRRT2Q7Z6L0 340 aaPredicted RBP12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 LSRQ86X29 649 aaPredicted RBP12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 ARHGEF39Q8N4T4 335 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 OR51S1Q8NGJ8 323 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 NECTIN4Q96NY8 510 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 C11orf54Q9H0W9 315 aaPredicted RBP12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 POLDIP2Q9Y2S7 368 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 DIP2CQ9Y2E4 1556 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 NFAT5O94916 1531 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 KIR2DS5A0A0G2JLQ3 304 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 A0A0G2JNG1 304 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 KIR2DS3K7RE56 304 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 SHC1P29353 583 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 ZNF280AP59817 542 aaPredicted RBP12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 KIR2DS5Q14953 304 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 RPEL1Q2QD12 228 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 CYHR1Q6ZMK1 362 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 AMIGO3Q86WK7 504 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 ANGPTL5Q86XS5 388 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 NMNAT3Q96T66 252 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 GLIPR1L1Q6UWM5 242 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 Q6ZN92 141 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 IGSF5Q9NSI5 407 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 CTDSP2O14595 271 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 AMMECR1LQ6DCA0 310 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 TTC9Q92623 222 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 ERGIC1Q969X5 290 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 THOC3Q96J01 351 aaKnown RBP12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 ADGRG7Q96K78 797 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 FYTTD1Q96QD9 318 aaKnown RBP12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 DDOQ99489 341 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 ULBP3Q9BZM4 244 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 CDCP1Q9H5V8 836 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 Q9Y3F1 56 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 PPP1R11O60927 126 aaPredicted RBP12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 HMGN2P05204 90 aaKnown RBP12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 APEHP13798 732 aaKnown RBP12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 KCNJ3P48549 501 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 UQCC3Q6UW78 93 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 DYRK2Q92630 601 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 LSM2Q9Y333 95 aaKnown RBP12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 EIF1P41567 113 aaKnown RBP12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 PMS2P11Q13670 270 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 OR2G6Q5TZ20 316 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 MTURNQ8N3F0 131 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 CELF2-AS1Q8N7Q2 184 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 CLRN3Q8NCR9 226 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 EDEM2Q9BV94 578 aa12.75□□□□□ -0.37
CSPG4P12-202ENST00000559989 SEMA7AO75326 666 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 TTC32Q5I0X7 151 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 DHRS13Q6UX07 377 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 OR2D3Q8NGH3 330 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 MOB3AQ96BX8 217 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 HES7Q9BYE0 225 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 SLC17A4Q9Y2C5 497 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 CFHP08603 1231 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 CPMP14384 443 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 RPL12P30050 165 aaKnown RBP12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 CD200P41217 278 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 Q6ZSR6 202 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 CBLL1Q75N03 491 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 SLC35B4Q969S0 331 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 POM121L2Q96KW2 1035 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 NFS1Q9Y697 457 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms