RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 FOXH1O75593 365 aa11.06□□□□□ -0.64
TPM1-220ENST00000559556 NGFP01138 241 aa11.06□□□□□ -0.64
TPM1-220ENST00000559556 HKR1P10072 659 aa11.06□□□□□ -0.64
TPM1-220ENST00000559556 TNFRSF1BP20333 461 aa11.06□□□□□ -0.64
TPM1-220ENST00000559556 ZFP36P26651 326 aaKnown RBP11.06□□□□□ -0.64
TPM1-220ENST00000559556 RPL27P61353 136 aaKnown RBP11.06□□□□□ -0.64
TPM1-220ENST00000559556 PIN1Q13526 163 aaPredicted RBP11.06□□□□□ -0.64
TPM1-220ENST00000559556 LAPTM4AQ15012 233 aa11.06□□□□□ -0.64
TPM1-220ENST00000559556 ALG10Q5BKT4 473 aa11.06□□□□□ -0.64
TPM1-220ENST00000559556 PRR31Q5SQ13 230 aa11.06□□□□□ -0.64
TPM1-220ENST00000559556 NANOGP8Q6NSW7 305 aa11.06□□□□□ -0.64
TPM1-220ENST00000559556 ZNF771Q7L3S4 317 aaPredicted RBP11.06□□□□□ -0.64
TPM1-220ENST00000559556 TREML1Q86YW5 311 aa11.06□□□□□ -0.64
TPM1-220ENST00000559556 DEFB108BQ8NET1 73 aa11.06□□□□□ -0.64
TPM1-220ENST00000559556 DYDC1Q8WWB3 177 aa11.06□□□□□ -0.64
TPM1-220ENST00000559556 C22orf15Q8WYQ4 148 aa11.06□□□□□ -0.64
TPM1-220ENST00000559556 NSMAFQ92636 917 aa11.06□□□□□ -0.64
TPM1-220ENST00000559556 ATP6V1G3Q96LB4 118 aa11.06□□□□□ -0.64
TPM1-220ENST00000559556 ZNF747Q9BV97 191 aa11.06□□□□□ -0.64
TPM1-220ENST00000559556 VIPAS39Q9H9C1 493 aa11.06□□□□□ -0.64
TPM1-220ENST00000559556 ZMAT3Q9HA38 289 aaKnown RBP11.06□□□□□ -0.64
TPM1-220ENST00000559556 ELOVL3Q9HB03 270 aa11.06□□□□□ -0.64
TPM1-220ENST00000559556 MSL2Q9HCI7 577 aa11.06□□□□□ -0.64
TPM1-220ENST00000559556 DDX28Q9NUL7 540 aaKnown RBP11.06□□□□□ -0.64
TPM1-220ENST00000559556 DCAF16Q9NXF7 216 aa11.06□□□□□ -0.64
TPM1-220ENST00000559556 UBAP1Q9NZ09 502 aa11.06□□□□□ -0.64
TPM1-220ENST00000559556 PURGQ9UJV8 347 aaKnown RBP11.06□□□□□ -0.64
TPM1-220ENST00000559556 MED31Q9Y3C7 131 aa11.06□□□□□ -0.64
TPM1-220ENST00000559556 PPIAL4AQ9Y536 164 aa11.06□□□□□ -0.64
TPM1-220ENST00000559556 HTR3EA5X5Y0 456 aa11.05□□□□□ -0.64
TPM1-220ENST00000559556 A8MXK9 166 aa11.05□□□□□ -0.64
TPM1-220ENST00000559556 FXYD1O00168 92 aa11.05□□□□□ -0.64
TPM1-220ENST00000559556 FBP2O00757 339 aa11.05□□□□□ -0.64
TPM1-220ENST00000559556 TMPRSS2O15393 492 aa11.05□□□□□ -0.64
TPM1-220ENST00000559556 SHOX2O60902 331 aaPredicted RBP11.05□□□□□ -0.64
TPM1-220ENST00000559556 LAP3P28838 519 aa11.05□□□□□ -0.64
TPM1-220ENST00000559556 PCBD1P61457 104 aa11.05□□□□□ -0.64
TPM1-220ENST00000559556 FOXL1Q12952 345 aa11.05□□□□□ -0.64
TPM1-220ENST00000559556 CDK5R2Q13319 367 aa11.05□□□□□ -0.64
TPM1-220ENST00000559556 TOP3AQ13472 1001 aaPredicted RBP11.05□□□□□ -0.64
TPM1-220ENST00000559556 ENDOGQ14249 297 aaKnown RBP11.05□□□□□ -0.64
TPM1-220ENST00000559556 TTMPQ5BVD1 217 aa11.05□□□□□ -0.64
TPM1-220ENST00000559556 ARMCX4Q5H9R4 360 aa11.05□□□□□ -0.64
TPM1-220ENST00000559556 MTX3Q5HYI7 312 aa11.05□□□□□ -0.64
TPM1-220ENST00000559556 FAM205BPQ63HN1 556 aa11.05□□□□□ -0.64
TPM1-220ENST00000559556 ZNF774Q6NX45 483 aa11.05□□□□□ -0.64
TPM1-220ENST00000559556 DOK3Q7L591 496 aa11.05□□□□□ -0.64
TPM1-220ENST00000559556 ZER1Q7Z7L7 766 aa11.05□□□□□ -0.64
TPM1-220ENST00000559556 SYT9Q86SS6 491 aa11.05□□□□□ -0.64
TPM1-220ENST00000559556 ZNF283Q8N7M2 679 aa11.05□□□□□ -0.64
TPM1-220ENST00000559556 CLDN22Q8N7P3 220 aa11.05□□□□□ -0.64
TPM1-220ENST00000559556 LRRC58Q96CX6 371 aa11.05□□□□□ -0.64
TPM1-220ENST00000559556 RBP7Q96R05 134 aa11.05□□□□□ -0.64
TPM1-220ENST00000559556 ZNF696Q9H7X3 374 aa11.05□□□□□ -0.64
TPM1-220ENST00000559556 PCDHGB1Q9Y5G3 927 aa11.05□□□□□ -0.64
TPM1-220ENST00000559556 TIMM10BQ9Y5J6 103 aa11.05□□□□□ -0.64
TPM1-220ENST00000559556 DNAJC9-AS1A6NH13 148 aa11.04□□□□□ -0.64
TPM1-220ENST00000559556 F5H0A9 414 aaPredicted RBP11.04□□□□□ -0.64
TPM1-220ENST00000559556 KCNAB3O43448 404 aa11.04□□□□□ -0.64
TPM1-220ENST00000559556 TIMM8AO60220 97 aaPredicted RBP11.04□□□□□ -0.64
TPM1-220ENST00000559556 PIP5K1CO60331 668 aa11.04□□□□□ -0.64
TPM1-220ENST00000559556 COX5BP10606 129 aa11.04□□□□□ -0.64
TPM1-220ENST00000559556 ZNF12P17014 697 aa11.04□□□□□ -0.64
TPM1-220ENST00000559556 MSR1P21757 451 aa11.04□□□□□ -0.64
TPM1-220ENST00000559556 PRTN3P24158 256 aa11.04□□□□□ -0.64
TPM1-220ENST00000559556 OR1E2P47887 323 aa11.04□□□□□ -0.64
TPM1-220ENST00000559556 ARHGDIAP52565 204 aa11.04□□□□□ -0.64
TPM1-220ENST00000559556 TNFAIP6P98066 277 aaPredicted RBP11.04□□□□□ -0.64
TPM1-220ENST00000559556 PSG7Q13046 419 aa11.04□□□□□ -0.64
TPM1-220ENST00000559556 CYLC2Q14093 348 aaPredicted RBP11.04□□□□□ -0.64
TPM1-220ENST00000559556 TMEM155Q4W5P6 130 aa11.04□□□□□ -0.64
TPM1-220ENST00000559556 RABL3Q5HYI8 236 aa11.04□□□□□ -0.64
TPM1-220ENST00000559556 KLF17Q5JT82 389 aaPredicted RBP11.04□□□□□ -0.64
TPM1-220ENST00000559556 ERICH5Q6P6B1 374 aa11.04□□□□□ -0.64
TPM1-220ENST00000559556 ARL9Q6T311 187 aa11.04□□□□□ -0.64
TPM1-220ENST00000559556 KLHL36Q8N4N3 616 aa11.04□□□□□ -0.64
TPM1-220ENST00000559556 SPICQ8N5J4 248 aa11.04□□□□□ -0.64
TPM1-220ENST00000559556 SIGLECL1Q8N7X8 197 aa11.04□□□□□ -0.64
TPM1-220ENST00000559556 NPEPL1Q8NDH3 523 aa11.04□□□□□ -0.64
TPM1-220ENST00000559556 OR8J3Q8NGG0 315 aa11.04□□□□□ -0.64
TPM1-220ENST00000559556 BPIFA2Q96DR5 249 aa11.04□□□□□ -0.64
TPM1-220ENST00000559556 THOC1Q96FV9 657 aaKnown RBP11.04□□□□□ -0.64
TPM1-220ENST00000559556 C4orf45Q96LM5 186 aa11.04□□□□□ -0.64
TPM1-220ENST00000559556 MAGEB18Q96M61 343 aa11.04□□□□□ -0.64
TPM1-220ENST00000559556 C1orf147Q96MC9 270 aaPredicted RBP11.04□□□□□ -0.64
TPM1-220ENST00000559556 SIGLEC11Q96RL6 698 aa11.04□□□□□ -0.64
TPM1-220ENST00000559556 SH3GL1Q99961 368 aa11.04□□□□□ -0.64
TPM1-220ENST00000559556 PATZ1Q9HBE1 687 aaKnown RBP11.04□□□□□ -0.64
TPM1-220ENST00000559556 NPHS2Q9NP85 383 aa11.04□□□□□ -0.64
TPM1-220ENST00000559556 MMP26Q9NRE1 261 aa11.04□□□□□ -0.64
TPM1-220ENST00000559556 TMEM106BQ9NUM4 274 aa11.04□□□□□ -0.64
TPM1-220ENST00000559556 PLEK2Q9NYT0 353 aa11.04□□□□□ -0.64
TPM1-220ENST00000559556 NUP50Q9UKX7 468 aa11.04□□□□□ -0.64
TPM1-220ENST00000559556 NDRG4Q9ULP0 352 aaKnown RBP11.04□□□□□ -0.64
TPM1-220ENST00000559556 A0A1W2PPL8 197 aa11.03□□□□□ -0.64
TPM1-220ENST00000559556 A6NIZ1 184 aa11.03□□□□□ -0.64
TPM1-220ENST00000559556 C12orf71A8MTZ7 269 aa11.03□□□□□ -0.64
TPM1-220ENST00000559556 TRAPPC2LH3BP13 241 aa11.03□□□□□ -0.64
TPM1-220ENST00000559556 ABHD16AO95870 558 aa11.03□□□□□ -0.64
TPM1-220ENST00000559556 IFNA14P01570 189 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms