RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 DECR1Q16698 335 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 TMEM95Q3KNT9 176 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 LGALSLQ3ZCW2 172 aaPredicted RBP6.31□□□□□ -1.4
ZEB1-216ENST00000559496 C19orf54Q5BKX5 351 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 CT45A2Q5DJT8 189 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 FAM69BQ5VUD6 431 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 OR2T5Q6IEZ7 315 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 HAGHLQ6PII5 290 aaPredicted RBP6.31□□□□□ -1.4
ZEB1-216ENST00000559496 HSDL2Q6YN16 418 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 C3P1Q6ZMU1 363 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 Q6ZPA2 131 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 CHMP1BQ7LBR1 199 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 TIPARPQ7Z3E1 657 aaKnown RBP6.31□□□□□ -1.4
ZEB1-216ENST00000559496 DPPA2Q7Z7J5 298 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 FJX1Q86VR8 437 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 TMEM17Q86X19 198 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 VRK2Q86Y07 508 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 C9orf40Q8IXQ3 194 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 NFAM1Q8NET5 270 aaPredicted RBP6.31□□□□□ -1.4
ZEB1-216ENST00000559496 B3GNT7Q8NFL0 401 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 OR2T29Q8NH02 315 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 C9orf43Q8TAL5 461 aaPredicted RBP6.31□□□□□ -1.4
ZEB1-216ENST00000559496 SCARB1Q8WTV0 552 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 CT55Q8WUE5 264 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 ADIPOR1Q96A54 375 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 C8orf44Q96CB5 159 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 ZG16BQ96DA0 208 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 ZNF354BQ96LW1 612 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 OR2M2Q96R28 347 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 MESP1Q9BRJ9 268 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 SPRY4Q9C004 299 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 WWTR1Q9GZV5 400 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 NXF5Q9H1B4 397 aaKnown RBP6.31□□□□□ -1.4
ZEB1-216ENST00000559496 REEP1Q9H902 201 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 FBXO34Q9NWN3 711 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 KLHL28Q9NXS3 571 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 ZNF443Q9Y2A4 671 aaPredicted RBP6.31□□□□□ -1.4
ZEB1-216ENST00000559496 SLC9A8Q9Y2E8 581 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 ENPP4Q9Y6X5 453 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 SDK2Q58EX2 2172 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 FAM186AA6NE01 2351 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 CUL9Q8IWT3 2517 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 LOC102723996A0A087X1L8 192 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 NPIPA5A0A0B4J1W7 369 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 TEX13CA0A0J9YWL9 993 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 TRBV11-1A0A0K0K1C0 115 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 CENPVL1A0A0U1RR11 272 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 FAM240BA0A1B0GVZ2 78 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 NPIPA7E9PJI5 369 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 SMLR1H3BR10 107 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 TEX46H3BTG2 121 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 M0R3H8 397 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 PEX12O00623 359 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 ADAMDEC1O15204 470 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 XPNPEP2O43895 674 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 PRKNO60260 465 aaPredicted RBP6.31□□□□□ -1.4
ZEB1-216ENST00000559496 CIDEAO60543 219 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 KLF7O75840 302 aaPredicted RBP6.31□□□□□ -1.4
ZEB1-216ENST00000559496 RAB3DO95716 219 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 IGHEP01854 428 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 SERPINA5P05154 406 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 DBIP07108 87 aaKnown RBP6.31□□□□□ -1.4
ZEB1-216ENST00000559496 NPIPA8P0DM63 369 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 CLUP10909 449 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 SLC2A1P11166 492 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 MUC1P15941 1255 aaPredicted RBP6.31□□□□□ -1.4
ZEB1-216ENST00000559496 NDUFB7P17568 137 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 RHCEP18577 417 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 RPS4Y1P22090 263 aaKnown RBP6.31□□□□□ -1.4
ZEB1-216ENST00000559496 CEACAM6P40199 344 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 SLC26A5P58743 744 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 RPS15P62841 145 aaKnown RBP6.31□□□□□ -1.4
ZEB1-216ENST00000559496 SPIBQ01892 262 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 FOXO1Q12778 655 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 HNF4GQ14541 408 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 SEC23BQ15437 767 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.31□□□□□ -1.4
ZEB1-216ENST00000559496 KLHL22Q53GT1 634 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 EIPR1Q53HC9 387 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 RIF1Q5UIP0 2472 aaKnown RBP6.31□□□□□ -1.4
ZEB1-216ENST00000559496 OR5M10Q6IEU7 315 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 LIN54Q6MZP7 749 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 ATRAIDQ6UW56 229 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 PCSK4Q6UW60 755 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 UQCC3Q6UW78 93 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 DEF8Q6ZN54 512 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 ZNF836Q6ZNA1 936 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 TMPRSS11FQ6ZWK6 438 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 ZNF367Q7RTV3 350 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 TSEN54Q7Z6J9 526 aaKnown RBP6.31□□□□□ -1.4
ZEB1-216ENST00000559496 CYP4Z1Q86W10 505 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 MARCH9Q86YJ5 346 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 SPAG16Q8N0X2 631 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 ZNF614Q8N883 585 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 BCORP1Q8N888 145 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 APCDD1LQ8NCL9 501 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 C19orf18Q8NEA5 215 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 SLC24A4Q8NFF2 622 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 CPT1CQ8TCG5 803 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 APOBEC4Q8WW27 367 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms