RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 OR2G3Q8NGZ4 309 aa1.69□□□□□ -2.14
GABPB1-209ENST00000559100 TCP10LQ8TDR4 215 aa1.69□□□□□ -2.14
GABPB1-209ENST00000559100 C7orf33Q8WU49 177 aa1.69□□□□□ -2.14
GABPB1-209ENST00000559100 LRRC29Q8WV35 223 aa1.69□□□□□ -2.14
GABPB1-209ENST00000559100 FAM131CQ96AQ9 280 aa1.69□□□□□ -2.14
GABPB1-209ENST00000559100 FAM122AQ96E09 287 aa1.69□□□□□ -2.14
GABPB1-209ENST00000559100 MSANTD3Q96H12 275 aa1.69□□□□□ -2.14
GABPB1-209ENST00000559100 TMEM101Q96IK0 257 aa1.69□□□□□ -2.14
GABPB1-209ENST00000559100 FOXC2Q99958 501 aa1.69□□□□□ -2.14
GABPB1-209ENST00000559100 TM6SF2Q9BZW4 377 aa1.69□□□□□ -2.14
GABPB1-209ENST00000559100 OR11A1Q9GZK7 315 aa1.69□□□□□ -2.14
GABPB1-209ENST00000559100 NAA50Q9GZZ1 169 aaKnown RBP1.69□□□□□ -2.14
GABPB1-209ENST00000559100 TMEM38AQ9H6F2 299 aa1.69□□□□□ -2.14
GABPB1-209ENST00000559100 NTN4Q9HB63 628 aa1.69□□□□□ -2.14
GABPB1-209ENST00000559100 CCL28Q9NRJ3 127 aa1.69□□□□□ -2.14
GABPB1-209ENST00000559100 CHMP5Q9NZZ3 219 aa1.69□□□□□ -2.14
GABPB1-209ENST00000559100 STOX2Q9P2F5 926 aaPredicted RBP1.69□□□□□ -2.14
GABPB1-209ENST00000559100 PCYOX1Q9UHG3 505 aa1.69□□□□□ -2.14
GABPB1-209ENST00000559100 NUFIP1Q9UHK0 495 aaKnown RBP1.69□□□□□ -2.14
GABPB1-209ENST00000559100 ST3GAL6Q9Y274 331 aa1.69□□□□□ -2.14
GABPB1-209ENST00000559100 HCFC1P51610 2035 aa1.69□□□□□ -2.14
GABPB1-209ENST00000559100 PHF3Q92576 2039 aaKnown RBP1.69□□□□□ -2.14
GABPB1-209ENST00000559100 MROH7Q68CQ1 1323 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 AKNAQ7Z591 1439 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 LRRK1Q38SD2 2015 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 TRAV39A0A0B4J263 110 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 IGKV3D-20A0A0C4DH25 116 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 LOC100506127A0A0U1RQW1 187 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 PRSS37A4D1T9 235 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 SYCE1LA8MT33 242 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 ZNF879B4DU55 563 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 SMKR1H3BMG3 65 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 M0QX08 132 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 SLC31A2O15432 143 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 RAD51CO43502 376 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 BCL2L11O43521 198 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 NEMFO60524 1076 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 UTS2O95399 124 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 TDP2O95551 362 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 ETHE1O95571 254 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 ACTL6AO96019 429 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 NPPAP01160 153 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 APOA1P02647 267 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 FABP3P05413 133 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 HPNP05981 417 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 EIF4EP06730 217 aaKnown RBP1.68□□□□□ -2.14
GABPB1-209ENST00000559100 GIG44P09565 113 aaPredicted RBP1.68□□□□□ -2.14
GABPB1-209ENST00000559100 P0C879 139 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 PNMA6AP0CW24 399 aaPredicted RBP1.68□□□□□ -2.14
GABPB1-209ENST00000559100 CTRB1P17538 263 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 PSMC3P17980 439 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 TCP1P17987 556 aaKnown RBP1.68□□□□□ -2.14
GABPB1-209ENST00000559100 CCNOP22674 350 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 WARSP23381 471 aaKnown RBP1.68□□□□□ -2.14
GABPB1-209ENST00000559100 IL32P24001 234 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 HRH1P35367 487 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 CEACAM3P40198 252 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 NCBP2P52298 156 aaKnown RBP eCLIP1.68□□□□□ -2.14
GABPB1-209ENST00000559100 HADHBP55084 474 aaKnown RBP1.68□□□□□ -2.14
GABPB1-209ENST00000559100 CLDN18P56856 261 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 ATP6V0D1P61421 351 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 XIAPP98170 497 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 ART3Q13508 389 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 ZNF266Q14584 549 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 HERPUD1Q15011 391 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 ANGPT1Q15389 498 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 STK11Q15831 433 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 ZNF630Q2M218 657 aaPredicted RBP1.68□□□□□ -2.14
GABPB1-209ENST00000559100 FAM83EQ2M2I3 478 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 PGGHGQ32M88 737 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 Q3ZCU0 254 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 VAX1Q5SQQ9 334 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 UBE2UQ5VVX9 321 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 ANKRD22Q5VYY1 191 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 CTRB2Q6GPI1 263 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 FRMPD2BQ6IN97 320 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 ZNF544Q6NX49 715 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 RFLNAQ6ZTI6 216 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 LINC00173Q6ZV60 143 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 FAM122BQ7Z309 247 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 UNC93AQ86WB7 457 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 FAM71AQ8IYT1 594 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 CEND1Q8N111 149 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 CBR4Q8N4T8 237 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 CSGALNACT2Q8N6G5 542 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 ZFP41Q8N8Y5 198 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 DCAF4L2Q8NA75 395 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 C20orf203Q8NBC4 194 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 OR10G9Q8NGN4 311 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 OR13C9Q8NGT0 318 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 OR51F2Q8NH61 342 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 LKAAEAR1Q8TD35 194 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 MCOLN3Q8TDD5 553 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 ASZ1Q8WWH4 475 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 GIMAP1Q8WWP7 306 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 TMEM230Q96A57 120 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 C19orf60Q96EN9 201 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 DUS3LQ96G46 650 aaKnown RBP1.68□□□□□ -2.14
GABPB1-209ENST00000559100 RNF170Q96K19 258 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 NAPGQ99747 312 aaPredicted RBP1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms