RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 NOS3P29474 1203 aa10.85□□□□□ -0.67
RABGGTA-207ENST00000558936 SMIM11AP58511 58 aa10.85□□□□□ -0.67
RABGGTA-207ENST00000558936 RAP1BP61224 184 aa10.85□□□□□ -0.67
RABGGTA-207ENST00000558936 RAP1AP62834 184 aa10.85□□□□□ -0.67
RABGGTA-207ENST00000558936 DAG1Q14118 895 aa10.85□□□□□ -0.67
RABGGTA-207ENST00000558936 FLOT2Q14254 428 aa10.85□□□□□ -0.67
RABGGTA-207ENST00000558936 MAD2L1BPQ15013 274 aaPredicted RBP10.85□□□□□ -0.67
RABGGTA-207ENST00000558936 KCNMB1Q16558 191 aa10.85□□□□□ -0.67
RABGGTA-207ENST00000558936 CLEC12BQ2HXU8 276 aa10.85□□□□□ -0.67
RABGGTA-207ENST00000558936 ALKBH6Q3KRA9 238 aa10.85□□□□□ -0.67
RABGGTA-207ENST00000558936 FAM205BPQ63HN1 556 aa10.85□□□□□ -0.67
RABGGTA-207ENST00000558936 GPR139Q6DWJ6 353 aa10.85□□□□□ -0.67
RABGGTA-207ENST00000558936 ACSM5Q6NUN0 579 aa10.85□□□□□ -0.67
RABGGTA-207ENST00000558936 RASSF6Q6ZTQ3 369 aa10.85□□□□□ -0.67
RABGGTA-207ENST00000558936 Q71RC1 249 aaPredicted RBP10.85□□□□□ -0.67
RABGGTA-207ENST00000558936 RRM2BQ7LG56 351 aa10.85□□□□□ -0.67
RABGGTA-207ENST00000558936 BIVMQ86UB2 503 aa10.85□□□□□ -0.67
RABGGTA-207ENST00000558936 ZBTB46Q86UZ6 589 aa10.85□□□□□ -0.67
RABGGTA-207ENST00000558936 ZNF525Q8N782 197 aa10.85□□□□□ -0.67
RABGGTA-207ENST00000558936 CYB561A3Q8NBI2 242 aa10.85□□□□□ -0.67
RABGGTA-207ENST00000558936 SLC30A7Q8NEW0 376 aa10.85□□□□□ -0.67
RABGGTA-207ENST00000558936 SDR9C7Q8NEX9 313 aa10.85□□□□□ -0.67
RABGGTA-207ENST00000558936 IL17RDQ8NFM7 739 aa10.85□□□□□ -0.67
RABGGTA-207ENST00000558936 OR10S1Q8NGN2 331 aa10.85□□□□□ -0.67
RABGGTA-207ENST00000558936 RBP7Q96R05 134 aa10.85□□□□□ -0.67
RABGGTA-207ENST00000558936 RBM4Q9BWF3 364 aaKnown RBP10.85□□□□□ -0.67
RABGGTA-207ENST00000558936 NMNAT2Q9BZQ4 307 aa10.85□□□□□ -0.67
RABGGTA-207ENST00000558936 OR51B6Q9H340 312 aa10.85□□□□□ -0.67
RABGGTA-207ENST00000558936 PNRC2Q9NPJ4 139 aaKnown RBP10.85□□□□□ -0.67
RABGGTA-207ENST00000558936 STX18Q9P2W9 335 aaKnown RBP10.85□□□□□ -0.67
RABGGTA-207ENST00000558936 LHFPL6Q9Y693 200 aa10.85□□□□□ -0.67
RABGGTA-207ENST00000558936 CDH10Q9Y6N8 788 aa10.85□□□□□ -0.67
RABGGTA-207ENST00000558936 A0A1W2PPL8 197 aa10.84□□□□□ -0.67
RABGGTA-207ENST00000558936 SMAD7O15105 426 aaKnown RBP10.84□□□□□ -0.67
RABGGTA-207ENST00000558936 SYNGR3O43761 229 aa10.84□□□□□ -0.67
RABGGTA-207ENST00000558936 TIPRLO75663 272 aa10.84□□□□□ -0.67
RABGGTA-207ENST00000558936 CCNB2O95067 398 aa10.84□□□□□ -0.67
RABGGTA-207ENST00000558936 SNAP29O95721 258 aa10.84□□□□□ -0.67
RABGGTA-207ENST00000558936 LY6G6DO95868 133 aa10.84□□□□□ -0.67
RABGGTA-207ENST00000558936 CST1P01037 141 aa10.84□□□□□ -0.67
RABGGTA-207ENST00000558936 DBHP09172 617 aa10.84□□□□□ -0.67
RABGGTA-207ENST00000558936 GLRXP35754 106 aa10.84□□□□□ -0.67
RABGGTA-207ENST00000558936 GGT2P36268 569 aa10.84□□□□□ -0.67
RABGGTA-207ENST00000558936 MPV17P39210 176 aa10.84□□□□□ -0.67
RABGGTA-207ENST00000558936 RPS27P42677 84 aaKnown RBP10.84□□□□□ -0.67
RABGGTA-207ENST00000558936 ZNF84P51523 738 aa10.84□□□□□ -0.67
RABGGTA-207ENST00000558936 KRTAP27-1Q3LI81 207 aa10.84□□□□□ -0.67
RABGGTA-207ENST00000558936 FAM98BQ52LJ0 330 aaKnown RBP10.84□□□□□ -0.67
RABGGTA-207ENST00000558936 LINC01590Q5TEZ4 76 aa10.84□□□□□ -0.67
RABGGTA-207ENST00000558936 LEG1Q6P5S2 330 aa10.84□□□□□ -0.67
RABGGTA-207ENST00000558936 CORO6Q6QEF8 472 aa10.84□□□□□ -0.67
RABGGTA-207ENST00000558936 CD300LDQ6UXZ3 194 aa10.84□□□□□ -0.67
RABGGTA-207ENST00000558936 RFPL4BQ6ZWI9 263 aa10.84□□□□□ -0.67
RABGGTA-207ENST00000558936 IQCF1Q8N6M8 205 aa10.84□□□□□ -0.67
RABGGTA-207ENST00000558936 SLC26A10Q8NG04 563 aa10.84□□□□□ -0.67
RABGGTA-207ENST00000558936 OR10G2Q8NGC3 310 aa10.84□□□□□ -0.67
RABGGTA-207ENST00000558936 OR52E2Q8NGJ4 325 aa10.84□□□□□ -0.67
RABGGTA-207ENST00000558936 MRPL24Q96A35 216 aaKnown RBP10.84□□□□□ -0.67
RABGGTA-207ENST00000558936 DUS3LQ96G46 650 aaKnown RBP10.84□□□□□ -0.67
RABGGTA-207ENST00000558936 SYT3Q9BQG1 590 aa10.84□□□□□ -0.67
RABGGTA-207ENST00000558936 BARX1Q9HBU1 254 aaPredicted RBP10.84□□□□□ -0.67
RABGGTA-207ENST00000558936 SRA1Q9HD15 236 aaKnown RBP10.84□□□□□ -0.67
RABGGTA-207ENST00000558936 SETD2Q9BYW2 2564 aaPredicted RBP10.83□□□□□ -0.68
RABGGTA-207ENST00000558936 MALRD1Q5VYJ5 2156 aa10.83□□□□□ -0.68
RABGGTA-207ENST00000558936 IGLV3-9A0A075B6K5 115 aa10.83□□□□□ -0.68
RABGGTA-207ENST00000558936 OR6C6A6NF89 314 aa10.83□□□□□ -0.68
RABGGTA-207ENST00000558936 VWC2LB2RUY7 222 aa10.83□□□□□ -0.68
RABGGTA-207ENST00000558936 B9A039 149 aa10.83□□□□□ -0.68
RABGGTA-207ENST00000558936 RNF223E7ERA6 249 aa10.83□□□□□ -0.68
RABGGTA-207ENST00000558936 LYNX1G3V0Z9 82 aa10.83□□□□□ -0.68
RABGGTA-207ENST00000558936 RER1O15258 196 aa10.83□□□□□ -0.68
RABGGTA-207ENST00000558936 AHCYL1O43865 530 aa10.83□□□□□ -0.68
RABGGTA-207ENST00000558936 SSX4O60224 188 aa10.83□□□□□ -0.68
RABGGTA-207ENST00000558936 ICMTO60725 284 aa10.83□□□□□ -0.68
RABGGTA-207ENST00000558936 NCR1O76036 304 aa10.83□□□□□ -0.68
RABGGTA-207ENST00000558936 FARS2O95363 451 aaKnown RBP10.83□□□□□ -0.68
RABGGTA-207ENST00000558936 RAB36O95755 333 aa10.83□□□□□ -0.68
RABGGTA-207ENST00000558936 LYNX1P0DP58 116 aa10.83□□□□□ -0.68
RABGGTA-207ENST00000558936 NPR2P20594 1047 aa10.83□□□□□ -0.68
RABGGTA-207ENST00000558936 MSR1P21757 451 aa10.83□□□□□ -0.68
RABGGTA-207ENST00000558936 EPHA2P29317 976 aa10.83□□□□□ -0.68
RABGGTA-207ENST00000558936 SLC6A6P31641 620 aa10.83□□□□□ -0.68
RABGGTA-207ENST00000558936 PYCR1P32322 319 aa10.83□□□□□ -0.68
RABGGTA-207ENST00000558936 DAPP51397 102 aa10.83□□□□□ -0.68
RABGGTA-207ENST00000558936 CBX1P83916 185 aa10.83□□□□□ -0.68
RABGGTA-207ENST00000558936 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.83□□□□□ -0.68
RABGGTA-207ENST00000558936 RAB35Q15286 201 aa10.83□□□□□ -0.68
RABGGTA-207ENST00000558936 SLC36A2Q495M3 483 aa10.83□□□□□ -0.68
RABGGTA-207ENST00000558936 VASH1Q7L8A9 365 aaPredicted RBP10.83□□□□□ -0.68
RABGGTA-207ENST00000558936 NAA40Q86UY6 237 aa10.83□□□□□ -0.68
RABGGTA-207ENST00000558936 SPATA24Q86W54 205 aa10.83□□□□□ -0.68
RABGGTA-207ENST00000558936 LNX2Q8N448 690 aa10.83□□□□□ -0.68
RABGGTA-207ENST00000558936 SLC37A3Q8NCC5 494 aa10.83□□□□□ -0.68
RABGGTA-207ENST00000558936 OR51L1Q8NGJ5 315 aa10.83□□□□□ -0.68
RABGGTA-207ENST00000558936 PTP4A1Q93096 173 aa10.83□□□□□ -0.68
RABGGTA-207ENST00000558936 IFT27Q9BW83 186 aa10.83□□□□□ -0.68
RABGGTA-207ENST00000558936 REEP1Q9H902 201 aa10.83□□□□□ -0.68
RABGGTA-207ENST00000558936 RPRD1BQ9NQG5 326 aaKnown RBP10.83□□□□□ -0.68
RABGGTA-207ENST00000558936 FBXL3Q9UKT7 428 aa10.83□□□□□ -0.68
RABGGTA-207ENST00000558936 TMCC3Q9ULS5 477 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms