RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 SCN3BQ9NY72 215 aa13.86□□□□□ -0.19
CDC42BPB-203ENST00000558867 CRNNQ9UBG3 495 aaPredicted RBP13.86□□□□□ -0.19
CDC42BPB-203ENST00000558867 OSGIN1Q9UJX0 560 aa13.86□□□□□ -0.19
CDC42BPB-203ENST00000558867 SLC7A7Q9UM01 511 aa13.86□□□□□ -0.19
CDC42BPB-203ENST00000558867 TMEM72A0PK05 275 aa13.85□□□□□ -0.19
CDC42BPB-203ENST00000558867 BCAS1O75363 584 aaPredicted RBP13.85□□□□□ -0.19
CDC42BPB-203ENST00000558867 GKN3PP0CG01 181 aa13.85□□□□□ -0.19
CDC42BPB-203ENST00000558867 IMPDH2P12268 514 aa13.85□□□□□ -0.19
CDC42BPB-203ENST00000558867 ATP6V1B1P15313 513 aa13.85□□□□□ -0.19
CDC42BPB-203ENST00000558867 SLC35A2P78381 396 aa13.85□□□□□ -0.19
CDC42BPB-203ENST00000558867 HOXC5Q00444 222 aa13.85□□□□□ -0.19
CDC42BPB-203ENST00000558867 CDK5Q00535 292 aa13.85□□□□□ -0.19
CDC42BPB-203ENST00000558867 PRKCDQ05655 676 aa13.85□□□□□ -0.19
CDC42BPB-203ENST00000558867 ULK3Q6PHR2 472 aa13.85□□□□□ -0.19
CDC42BPB-203ENST00000558867 TMPRSS11FQ6ZWK6 438 aa13.85□□□□□ -0.19
CDC42BPB-203ENST00000558867 CNIH3Q8TBE1 160 aa13.85□□□□□ -0.19
CDC42BPB-203ENST00000558867 DNAJA4Q8WW22 397 aaPredicted RBP13.85□□□□□ -0.19
CDC42BPB-203ENST00000558867 TMEM239Q8WW34 195 aa13.85□□□□□ -0.19
CDC42BPB-203ENST00000558867 JMJD8Q96S16 334 aa13.85□□□□□ -0.19
CDC42BPB-203ENST00000558867 C12orf10Q9HB07 376 aa13.85□□□□□ -0.19
CDC42BPB-203ENST00000558867 IMPAD1Q9NX62 359 aa13.85□□□□□ -0.19
CDC42BPB-203ENST00000558867 IL20Q9NYY1 176 aa13.85□□□□□ -0.19
CDC42BPB-203ENST00000558867 A0A1B0GWA3 101 aa13.84□□□□□ -0.19
CDC42BPB-203ENST00000558867 AQP7P3A6NL99 342 aa13.84□□□□□ -0.19
CDC42BPB-203ENST00000558867 TRIM77I1YAP6 450 aa13.84□□□□□ -0.19
CDC42BPB-203ENST00000558867 AKR7A3O95154 331 aa13.84□□□□□ -0.19
CDC42BPB-203ENST00000558867 CECR9P0C854 216 aa13.84□□□□□ -0.19
CDC42BPB-203ENST00000558867 IL2RGP31785 369 aa13.84□□□□□ -0.19
CDC42BPB-203ENST00000558867 COMPP49747 757 aaPredicted RBP13.84□□□□□ -0.19
CDC42BPB-203ENST00000558867 OR7A5Q15622 319 aa13.84□□□□□ -0.19
CDC42BPB-203ENST00000558867 RPL13AP3Q6NVV1 102 aa13.84□□□□□ -0.19
CDC42BPB-203ENST00000558867 TMEM99Q8N816 258 aa13.84□□□□□ -0.19
CDC42BPB-203ENST00000558867 ZIC4Q8N9L1 334 aa13.84□□□□□ -0.19
CDC42BPB-203ENST00000558867 TMEM255BQ8WV15 326 aa13.84□□□□□ -0.19
CDC42BPB-203ENST00000558867 BCL2L2Q92843 193 aaPredicted RBP13.84□□□□□ -0.19
CDC42BPB-203ENST00000558867 ZNF385AQ96PM9 386 aaKnown RBP13.84□□□□□ -0.19
CDC42BPB-203ENST00000558867 DOK1Q99704 481 aa13.84□□□□□ -0.19
CDC42BPB-203ENST00000558867 GPA33Q99795 319 aa13.84□□□□□ -0.19
CDC42BPB-203ENST00000558867 SLC19A3Q9BZV2 496 aa13.84□□□□□ -0.19
CDC42BPB-203ENST00000558867 RBM38Q9H0Z9 239 aaKnown RBP13.84□□□□□ -0.19
CDC42BPB-203ENST00000558867 VCX3AQ9NNX9 186 aa13.84□□□□□ -0.19
CDC42BPB-203ENST00000558867 FKBP14Q9NWM8 211 aa13.84□□□□□ -0.19
CDC42BPB-203ENST00000558867 DYSFO75923 2080 aa13.84□□□□□ -0.19
CDC42BPB-203ENST00000558867 LIPT2A6NK58 231 aa13.83□□□□□ -0.2
CDC42BPB-203ENST00000558867 VENTXO95231 258 aa13.83□□□□□ -0.2
CDC42BPB-203ENST00000558867 IGLV1-44P01699 117 aa13.83□□□□□ -0.2
CDC42BPB-203ENST00000558867 THBS4P35443 961 aa13.83□□□□□ -0.2
CDC42BPB-203ENST00000558867 GIPRP48546 466 aa13.83□□□□□ -0.2
CDC42BPB-203ENST00000558867 COPZ1P61923 177 aa13.83□□□□□ -0.2
CDC42BPB-203ENST00000558867 EFNB1P98172 346 aa13.83□□□□□ -0.2
CDC42BPB-203ENST00000558867 MVKQ03426 396 aa13.83□□□□□ -0.2
CDC42BPB-203ENST00000558867 LGALS3BPQ08380 585 aa13.83□□□□□ -0.2
CDC42BPB-203ENST00000558867 RIN1Q13671 783 aa13.83□□□□□ -0.2
CDC42BPB-203ENST00000558867 FOXB2Q5VYV0 432 aa13.83□□□□□ -0.2
CDC42BPB-203ENST00000558867 NRMQ8IXM6 262 aa13.83□□□□□ -0.2
CDC42BPB-203ENST00000558867 CCDC36Q8IYA8 594 aa13.83□□□□□ -0.2
CDC42BPB-203ENST00000558867 ANKK1Q8NFD2 765 aa13.83□□□□□ -0.2
CDC42BPB-203ENST00000558867 OR8J1Q8NGP2 316 aa13.83□□□□□ -0.2
CDC42BPB-203ENST00000558867 PRRG3Q9BZD7 231 aa13.83□□□□□ -0.2
CDC42BPB-203ENST00000558867 MS4A5Q9H3V2 200 aa13.83□□□□□ -0.2
CDC42BPB-203ENST00000558867 PCDHB10Q9UN67 800 aa13.83□□□□□ -0.2
CDC42BPB-203ENST00000558867 RASD1Q9Y272 281 aa13.83□□□□□ -0.2
CDC42BPB-203ENST00000558867 MED31Q9Y3C7 131 aa13.83□□□□□ -0.2
CDC42BPB-203ENST00000558867 CMAHPQ9Y471 501 aa13.83□□□□□ -0.2
CDC42BPB-203ENST00000558867 MGAM2Q2M2H8 2515 aa13.83□□□□□ -0.2
CDC42BPB-203ENST00000558867 MEGF8Q7Z7M0 2845 aa13.82□□□□□ -0.2
CDC42BPB-203ENST00000558867 A0A096LPE4 126 aa13.82□□□□□ -0.2
CDC42BPB-203ENST00000558867 A0A1W2PPZ6 126 aa13.82□□□□□ -0.2
CDC42BPB-203ENST00000558867 FAM157AC9JC47 383 aa13.82□□□□□ -0.2
CDC42BPB-203ENST00000558867 H3BN98 237 aa13.82□□□□□ -0.2
CDC42BPB-203ENST00000558867 ZNF701M0R085 212 aaPredicted RBP13.82□□□□□ -0.2
CDC42BPB-203ENST00000558867 IGKV3-15P01624 115 aa13.82□□□□□ -0.2
CDC42BPB-203ENST00000558867 HTR1AP08908 422 aa13.82□□□□□ -0.2
CDC42BPB-203ENST00000558867 CBR1P16152 277 aa13.82□□□□□ -0.2
CDC42BPB-203ENST00000558867 EEF1B2P24534 225 aaKnown RBP13.82□□□□□ -0.2
CDC42BPB-203ENST00000558867 ARR3P36575 388 aa13.82□□□□□ -0.2
CDC42BPB-203ENST00000558867 OCLNQ16625 522 aa13.82□□□□□ -0.2
CDC42BPB-203ENST00000558867 ZBED5Q49AG3 693 aa13.82□□□□□ -0.2
CDC42BPB-203ENST00000558867 SLC27A4Q6P1M0 643 aa13.82□□□□□ -0.2
CDC42BPB-203ENST00000558867 NIPAL3Q6P499 406 aa13.82□□□□□ -0.2
CDC42BPB-203ENST00000558867 WDR88Q6ZMY6 472 aa13.82□□□□□ -0.2
CDC42BPB-203ENST00000558867 ZNF620Q6ZNG0 422 aa13.82□□□□□ -0.2
CDC42BPB-203ENST00000558867 CREB3L2Q70SY1 520 aa13.82□□□□□ -0.2
CDC42BPB-203ENST00000558867 PRSS48Q7RTY5 328 aa13.82□□□□□ -0.2
CDC42BPB-203ENST00000558867 SATL1Q86VE3 508 aa13.82□□□□□ -0.2
CDC42BPB-203ENST00000558867 SPARTQ8N0X7 666 aa13.82□□□□□ -0.2
CDC42BPB-203ENST00000558867 BPIFB6Q8NFQ5 453 aa13.82□□□□□ -0.2
CDC42BPB-203ENST00000558867 SEMA6DQ8NFY4 1073 aa13.82□□□□□ -0.2
CDC42BPB-203ENST00000558867 TEX47Q8TBZ9 253 aa13.82□□□□□ -0.2
CDC42BPB-203ENST00000558867 FAM216AQ8WUB2 273 aa13.82□□□□□ -0.2
CDC42BPB-203ENST00000558867 TMEM186Q96B77 213 aa13.82□□□□□ -0.2
CDC42BPB-203ENST00000558867 DGCR14Q96DF8 476 aaKnown RBP13.82□□□□□ -0.2
CDC42BPB-203ENST00000558867 FAM46AQ96IP4 442 aaKnown RBP13.82□□□□□ -0.2
CDC42BPB-203ENST00000558867 Q96MT0 163 aa13.82□□□□□ -0.2
CDC42BPB-203ENST00000558867 ALKBH3Q96Q83 286 aaPredicted RBP13.82□□□□□ -0.2
CDC42BPB-203ENST00000558867 LINC00470Q9BZP3 86 aa13.82□□□□□ -0.2
CDC42BPB-203ENST00000558867 HIF1ANQ9NWT6 349 aa13.82□□□□□ -0.2
CDC42BPB-203ENST00000558867 CNOT2Q9NZN8 540 aaKnown RBP13.82□□□□□ -0.2
CDC42BPB-203ENST00000558867 PSORS1C1Q9UIG5 152 aa13.82□□□□□ -0.2
CDC42BPB-203ENST00000558867 SPEF1Q9Y4P9 236 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms