RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 SOCS2O14508 198 aa7.32□□□□□ -1.24
TPM1-213ENST00000558400 IGHV4-39P01824 125 aa7.32□□□□□ -1.24
TPM1-213ENST00000558400 COX5BP10606 129 aa7.32□□□□□ -1.24
TPM1-213ENST00000558400 ZNF32P17041 273 aa7.32□□□□□ -1.24
TPM1-213ENST00000558400 CDKN2AP42771 156 aaKnown RBP7.32□□□□□ -1.24
TPM1-213ENST00000558400 PPOXP50336 477 aa7.32□□□□□ -1.24
TPM1-213ENST00000558400 GDI2P50395 445 aaKnown RBP7.32□□□□□ -1.24
TPM1-213ENST00000558400 FXYD6P3P58550 94 aa7.32□□□□□ -1.24
TPM1-213ENST00000558400 PSG4Q00888 419 aa7.32□□□□□ -1.24
TPM1-213ENST00000558400 GLO1Q04760 184 aa7.32□□□□□ -1.24
TPM1-213ENST00000558400 SCRN3Q0VDG4 424 aa7.32□□□□□ -1.24
TPM1-213ENST00000558400 KCNMB1Q16558 191 aa7.32□□□□□ -1.24
TPM1-213ENST00000558400 SLC36A3Q495N2 470 aa7.32□□□□□ -1.24
TPM1-213ENST00000558400 MESTQ5EB52 335 aa7.32□□□□□ -1.24
TPM1-213ENST00000558400 PABPC1L2AQ5JQF8 200 aa7.32□□□□□ -1.24
TPM1-213ENST00000558400 ZNF770Q6IQ21 691 aaPredicted RBP7.32□□□□□ -1.24
TPM1-213ENST00000558400 KRT80Q6KB66 452 aa7.32□□□□□ -1.24
TPM1-213ENST00000558400 RGS7BPQ6MZT1 257 aaPredicted RBP7.32□□□□□ -1.24
TPM1-213ENST00000558400 CD300LDQ6UXZ3 194 aa7.32□□□□□ -1.24
TPM1-213ENST00000558400 ZNF620Q6ZNG0 422 aa7.32□□□□□ -1.24
TPM1-213ENST00000558400 ZNF584Q8IVC4 421 aa7.32□□□□□ -1.24
TPM1-213ENST00000558400 ADGRG5Q8IZF4 528 aa7.32□□□□□ -1.24
TPM1-213ENST00000558400 PAPD5Q8NDF8 572 aaKnown RBP7.32□□□□□ -1.24
TPM1-213ENST00000558400 ZNF540Q8NDQ6 660 aa7.32□□□□□ -1.24
TPM1-213ENST00000558400 GIPC3Q8TF64 312 aa7.32□□□□□ -1.24
TPM1-213ENST00000558400 IPCEF1Q8WWN9 437 aaPredicted RBP7.32□□□□□ -1.24
TPM1-213ENST00000558400 NEU4Q8WWR8 484 aaPredicted RBP7.32□□□□□ -1.24
TPM1-213ENST00000558400 MRPL24Q96A35 216 aaKnown RBP7.32□□□□□ -1.24
TPM1-213ENST00000558400 SAMD8Q96LT4 415 aa7.32□□□□□ -1.24
TPM1-213ENST00000558400 VRK1Q99986 396 aaPredicted RBP7.32□□□□□ -1.24
TPM1-213ENST00000558400 CADM1Q9BY67 442 aaKnown RBP7.32□□□□□ -1.24
TPM1-213ENST00000558400 NUAK2Q9H093 628 aa7.32□□□□□ -1.24
TPM1-213ENST00000558400 SYT4Q9H2B2 425 aa7.32□□□□□ -1.24
TPM1-213ENST00000558400 GSX1Q9H4S2 264 aaPredicted RBP7.32□□□□□ -1.24
TPM1-213ENST00000558400 ZNF556Q9HAH1 456 aa7.32□□□□□ -1.24
TPM1-213ENST00000558400 ELOVL3Q9HB03 270 aa7.32□□□□□ -1.24
TPM1-213ENST00000558400 POLE4Q9NR33 117 aa7.32□□□□□ -1.24
TPM1-213ENST00000558400 IL20RAQ9UHF4 553 aa7.32□□□□□ -1.24
TPM1-213ENST00000558400 NDRG4Q9ULP0 352 aaKnown RBP7.32□□□□□ -1.24
TPM1-213ENST00000558400 COA3Q9Y2R0 106 aaPredicted RBP7.32□□□□□ -1.24
TPM1-213ENST00000558400 FKBP7Q9Y680 259 aa7.32□□□□□ -1.24
TPM1-213ENST00000558400 CDH10Q9Y6N8 788 aa7.32□□□□□ -1.24
TPM1-213ENST00000558400 U3KQV3 271 aa7.32□□□□□ -1.24
TPM1-213ENST00000558400 FLNAP21333 2647 aaKnown RBP7.32□□□□□ -1.24
TPM1-213ENST00000558400 PLCE1Q9P212 2302 aa7.32□□□□□ -1.24
TPM1-213ENST00000558400 TCRBV3S1A0A5B6 114 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 TMEM129A0AVI4 362 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 NDUFS8O00217 210 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 SYNGR3O43761 229 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 SSX4O60224 188 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 E2F6O75461 281 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 PPP1R3DO95685 299 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 ANXA8P13928 327 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 HIST1H1CP16403 213 aaKnown RBP7.31□□□□□ -1.24
TPM1-213ENST00000558400 CTLA4P16410 223 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 APEX1P27695 318 aaKnown RBP7.31□□□□□ -1.24
TPM1-213ENST00000558400 CENPAP49450 140 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 TNK1Q13470 666 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 AQP6Q13520 282 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 ZNF718Q3SXZ3 478 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 LEG1Q6P5S2 330 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 CLEC2AQ6UVW9 174 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 DNM1P46Q6ZS02 220 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 PTCHD4Q6ZW05 846 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 ZBTB46Q86UZ6 589 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 MYPOPQ86VE0 399 aaPredicted RBP7.31□□□□□ -1.24
TPM1-213ENST00000558400 C10orf67Q8IYJ2 551 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 LNX2Q8N448 690 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 AQP11Q8NBQ7 271 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 CPEB3Q8NE35 698 aaKnown RBP7.31□□□□□ -1.24
TPM1-213ENST00000558400 GJC3Q8NFK1 279 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 OR10H5Q8NGA6 315 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 OR10G2Q8NGC3 310 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 OR4K13Q8NH42 304 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 RASD2Q96D21 266 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 NRBF2Q96F24 287 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 COX4I2Q96KJ9 171 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 POM121L2Q96KW2 1035 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 COG8Q96MW5 612 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 NMNAT3Q96T66 252 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 ZNF416Q9BWM5 594 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 CDADC1Q9BWV3 514 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 TEX12Q9BXU0 123 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 REG4Q9BYZ8 158 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 OR2H1Q9GZK4 316 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 RACGAP1Q9H0H5 632 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 RERGLQ9H628 205 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 SRA1Q9HD15 236 aaKnown RBP7.31□□□□□ -1.24
TPM1-213ENST00000558400 SLCO1C1Q9NYB5 712 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 DNAJB9Q9UBS3 223 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 REV1Q9UBZ9 1251 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 GDF2Q9UK05 429 aaPredicted RBP7.31□□□□□ -1.24
TPM1-213ENST00000558400 B9D1Q9UPM9 204 aa7.31□□□□□ -1.24
TPM1-213ENST00000558400 LOC390937A0A1W2PQ73 354 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 C5orf49A4QMS7 147 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 H3BSA7 217 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 H7C1C5 153 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 H7C1Q1 480 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 M0R233 179 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 BHLHE40O14503 412 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms