RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 H0YJX3 145 aa18.54■□□□□ 0.56
CASC4-204ENST00000557945 M0R1B8 84 aa18.54■□□□□ 0.56
CASC4-204ENST00000557945 CBR1P16152 277 aa18.54■□□□□ 0.56
CASC4-204ENST00000557945 ZNF32P17041 273 aa18.54■□□□□ 0.56
CASC4-204ENST00000557945 SLC2A5P22732 501 aa18.54■□□□□ 0.56
CASC4-204ENST00000557945 ARR3P36575 388 aa18.54■□□□□ 0.56
CASC4-204ENST00000557945 VHLP40337 213 aa18.54■□□□□ 0.56
CASC4-204ENST00000557945 ADAM8P78325 824 aa18.54■□□□□ 0.56
CASC4-204ENST00000557945 LCN1P1Q5VSP4 162 aa18.54■□□□□ 0.56
CASC4-204ENST00000557945 SEZ6L2Q6UXD5 910 aa18.54■□□□□ 0.56
CASC4-204ENST00000557945 MEPCEQ7L2J0 689 aaKnown RBP18.54■□□□□ 0.56
CASC4-204ENST00000557945 GID4Q8IVV7 300 aa18.54■□□□□ 0.56
CASC4-204ENST00000557945 MOV10Q9HCE1 1003 aaKnown RBP18.54■□□□□ 0.56
CASC4-204ENST00000557945 ASH2LQ9UBL3 628 aa18.54■□□□□ 0.56
CASC4-204ENST00000557945 COMMD3-BMI1R4GMX3 469 aa18.54■□□□□ 0.56
CASC4-204ENST00000557945 HRGP04196 525 aa18.53■□□□□ 0.56
CASC4-204ENST00000557945 PAX7P23759 505 aa18.53■□□□□ 0.56
CASC4-204ENST00000557945 IDH3GP51553 393 aaPredicted RBP18.53■□□□□ 0.56
CASC4-204ENST00000557945 SNRPGP62308 76 aaKnown RBP18.53■□□□□ 0.56
CASC4-204ENST00000557945 IL5RAQ01344 420 aa18.53■□□□□ 0.56
CASC4-204ENST00000557945 AQP6Q13520 282 aa18.53■□□□□ 0.56
CASC4-204ENST00000557945 SNCBQ16143 134 aa18.53■□□□□ 0.56
CASC4-204ENST00000557945 C6orf52Q5T4I8 152 aa18.53■□□□□ 0.56
CASC4-204ENST00000557945 HIST2H2BCQ6DN03 193 aa18.53■□□□□ 0.56
CASC4-204ENST00000557945 ERI1Q8IV48 349 aaKnown RBP18.53■□□□□ 0.56
CASC4-204ENST00000557945 ENTHD1Q8IYW4 607 aa18.53■□□□□ 0.56
CASC4-204ENST00000557945 ZNF582Q96NG8 517 aaPredicted RBP18.53■□□□□ 0.56
CASC4-204ENST00000557945 TEAD3Q99594 435 aa18.53■□□□□ 0.56
CASC4-204ENST00000557945 WDR76Q9H967 626 aa18.53■□□□□ 0.56
CASC4-204ENST00000557945 AASSQ9UDR5 926 aa18.53■□□□□ 0.56
CASC4-204ENST00000557945 TIMM10BQ9Y5J6 103 aa18.53■□□□□ 0.56
CASC4-204ENST00000557945 PKDREJQ9NTG1 2253 aa18.53■□□□□ 0.56
CASC4-204ENST00000557945 CCDC182A6NF36 153 aa18.52■□□□□ 0.55
CASC4-204ENST00000557945 H0YAE9 185 aa18.52■□□□□ 0.55
CASC4-204ENST00000557945 MPZL2O60487 215 aa18.52■□□□□ 0.55
CASC4-204ENST00000557945 MMP7P09237 267 aaPredicted RBP18.52■□□□□ 0.55
CASC4-204ENST00000557945 SPARCP09486 303 aa18.52■□□□□ 0.55
CASC4-204ENST00000557945 CDH11P55287 796 aa18.52■□□□□ 0.55
CASC4-204ENST00000557945 PLP2Q04941 152 aa18.52■□□□□ 0.55
CASC4-204ENST00000557945 RAB39AQ14964 217 aa18.52■□□□□ 0.55
CASC4-204ENST00000557945 BEX5Q5H9J7 111 aa18.52■□□□□ 0.55
CASC4-204ENST00000557945 ZNF691Q5VV52 312 aa18.52■□□□□ 0.55
CASC4-204ENST00000557945 CORO6Q6QEF8 472 aa18.52■□□□□ 0.55
CASC4-204ENST00000557945 SYT9Q86SS6 491 aa18.52■□□□□ 0.55
CASC4-204ENST00000557945 LINC00346Q8IVM7 164 aa18.52■□□□□ 0.55
CASC4-204ENST00000557945 SETD9Q8NE22 299 aa18.52■□□□□ 0.55
CASC4-204ENST00000557945 PIK3IP1Q96FE7 263 aa18.52■□□□□ 0.55
CASC4-204ENST00000557945 PLPPR2Q96GM1 343 aa18.52■□□□□ 0.55
CASC4-204ENST00000557945 INTS14Q96SY0 518 aa18.52■□□□□ 0.55
CASC4-204ENST00000557945 CLN6Q9NWW5 311 aa18.52■□□□□ 0.55
CASC4-204ENST00000557945 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.51■□□□□ 0.55
CASC4-204ENST00000557945 SLC22A31A6NKX4 558 aa18.51■□□□□ 0.55
CASC4-204ENST00000557945 ZNF593O00488 134 aaPredicted RBP18.51■□□□□ 0.55
CASC4-204ENST00000557945 ENTPD6O75354 484 aa18.51■□□□□ 0.55
CASC4-204ENST00000557945 CELA3BP08861 270 aa18.51■□□□□ 0.55
CASC4-204ENST00000557945 RPS27P42677 84 aaKnown RBP18.51■□□□□ 0.55
CASC4-204ENST00000557945 ENTPD1P49961 510 aa18.51■□□□□ 0.55
CASC4-204ENST00000557945 PSG4Q00888 419 aa18.51■□□□□ 0.55
CASC4-204ENST00000557945 SCRN3Q0VDG4 424 aa18.51■□□□□ 0.55
CASC4-204ENST00000557945 DAZAP2Q15038 168 aaPredicted RBP18.51■□□□□ 0.55
CASC4-204ENST00000557945 PABPC1L2AQ5JQF8 200 aa18.51■□□□□ 0.55
CASC4-204ENST00000557945 TMEM108Q6UXF1 575 aa18.51■□□□□ 0.55
CASC4-204ENST00000557945 FAM169BQ8N8A8 192 aa18.51■□□□□ 0.55
CASC4-204ENST00000557945 OR6N2Q8NGY6 317 aa18.51■□□□□ 0.55
CASC4-204ENST00000557945 OR2AJ1Q8NGZ0 328 aa18.51■□□□□ 0.55
CASC4-204ENST00000557945 AKR7LQ8NHP1 331 aa18.51■□□□□ 0.55
CASC4-204ENST00000557945 RHOXF1Q8NHV9 184 aa18.51■□□□□ 0.55
CASC4-204ENST00000557945 TFAP2CQ92754 450 aa18.51■□□□□ 0.55
CASC4-204ENST00000557945 RFKQ969G6 155 aa18.51■□□□□ 0.55
CASC4-204ENST00000557945 MS4A3Q96HJ5 214 aa18.51■□□□□ 0.55
CASC4-204ENST00000557945 WACQ9BTA9 647 aa18.51■□□□□ 0.55
CASC4-204ENST00000557945 OR2H1Q9GZK4 316 aa18.51■□□□□ 0.55
CASC4-204ENST00000557945 ESRP2Q9H6T0 727 aaKnown RBP18.51■□□□□ 0.55
CASC4-204ENST00000557945 CRNNQ9UBG3 495 aaPredicted RBP18.51■□□□□ 0.55
CASC4-204ENST00000557945 KCNG2Q9UJ96 466 aa18.51■□□□□ 0.55
CASC4-204ENST00000557945 LHFPL6Q9Y693 200 aa18.51■□□□□ 0.55
CASC4-204ENST00000557945 IGHV1-18A0A0C4DH31 117 aa18.5■□□□□ 0.55
CASC4-204ENST00000557945 IQCMA0A1B0GVH7 501 aa18.5■□□□□ 0.55
CASC4-204ENST00000557945 DPRXA6NFQ7 191 aa18.5■□□□□ 0.55
CASC4-204ENST00000557945 DEFB108AA8MXU0 73 aa18.5■□□□□ 0.55
CASC4-204ENST00000557945 SELENOFO60613 162 aa18.5■□□□□ 0.55
CASC4-204ENST00000557945 TMCC2O75069 709 aa18.5■□□□□ 0.55
CASC4-204ENST00000557945 IGKV3-15P01624 115 aa18.5■□□□□ 0.55
CASC4-204ENST00000557945 GNAO1P09471 354 aa18.5■□□□□ 0.55
CASC4-204ENST00000557945 NAA10P41227 235 aaPredicted RBP18.5■□□□□ 0.55
CASC4-204ENST00000557945 HSPA13P48723 471 aa18.5■□□□□ 0.55
CASC4-204ENST00000557945 IL18R1Q13478 541 aa18.5■□□□□ 0.55
CASC4-204ENST00000557945 OCLNQ16625 522 aa18.5■□□□□ 0.55
CASC4-204ENST00000557945 MEDAGQ5VYS4 303 aa18.5■□□□□ 0.55
CASC4-204ENST00000557945 WNT5BQ9H1J7 359 aa18.5■□□□□ 0.55
CASC4-204ENST00000557945 CYB5R1Q9UHQ9 305 aa18.5■□□□□ 0.55
CASC4-204ENST00000557945 FBXL3Q9UKT7 428 aa18.5■□□□□ 0.55
CASC4-204ENST00000557945 PTPN13Q12923 2485 aa18.5■□□□□ 0.55
CASC4-204ENST00000557945 UTP20O75691 2785 aaKnown RBP18.49■□□□□ 0.55
CASC4-204ENST00000557945 A6NNC1 897 aa18.49■□□□□ 0.55
CASC4-204ENST00000557945 RER1O15258 196 aa18.49■□□□□ 0.55
CASC4-204ENST00000557945 SIAH2O43255 324 aa18.49■□□□□ 0.55
CASC4-204ENST00000557945 IGLV1-44P01699 117 aa18.49■□□□□ 0.55
CASC4-204ENST00000557945 MRPL3P09001 348 aaKnown RBP18.49■□□□□ 0.55
CASC4-204ENST00000557945 CECR9P0C854 216 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms