RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 DAG1Q14118 895 aa12.43□□□□□ -0.42
USP3-205ENST00000557884 KEAP1Q14145 624 aa12.43□□□□□ -0.42
USP3-205ENST00000557884 VHLLQ6RSH7 139 aa12.43□□□□□ -0.42
USP3-205ENST00000557884 ZBTB46Q86UZ6 589 aa12.43□□□□□ -0.42
USP3-205ENST00000557884 CBR4Q8N4T8 237 aa12.43□□□□□ -0.42
USP3-205ENST00000557884 SLC30A7Q8NEW0 376 aa12.43□□□□□ -0.42
USP3-205ENST00000557884 OR2T4Q8NH00 348 aa12.43□□□□□ -0.42
USP3-205ENST00000557884 FBXW5Q969U6 566 aa12.43□□□□□ -0.42
USP3-205ENST00000557884 RBM4BQ9BQ04 359 aaKnown RBP12.43□□□□□ -0.42
USP3-205ENST00000557884 OSBPL10Q9BXB5 764 aa12.43□□□□□ -0.42
USP3-205ENST00000557884 HCAR1Q9BXC0 346 aa12.43□□□□□ -0.42
USP3-205ENST00000557884 OR2H1Q9GZK4 316 aa12.43□□□□□ -0.42
USP3-205ENST00000557884 WNT5BQ9H1J7 359 aa12.43□□□□□ -0.42
USP3-205ENST00000557884 SLC25A19Q9HC21 320 aa12.43□□□□□ -0.42
USP3-205ENST00000557884 TVP23BQ9NYZ1 205 aa12.43□□□□□ -0.42
USP3-205ENST00000557884 IQCMA0A1B0GVH7 501 aa12.42□□□□□ -0.42
USP3-205ENST00000557884 TVP23AA6NH52 213 aa12.42□□□□□ -0.42
USP3-205ENST00000557884 M0R129 80 aa12.42□□□□□ -0.42
USP3-205ENST00000557884 ATE1O95260 518 aa12.42□□□□□ -0.42
USP3-205ENST00000557884 TFP02787 698 aa12.42□□□□□ -0.42
USP3-205ENST00000557884 RAF1P04049 648 aa12.42□□□□□ -0.42
USP3-205ENST00000557884 SPI1P17947 270 aa12.42□□□□□ -0.42
USP3-205ENST00000557884 DNASE1P24855 282 aa12.42□□□□□ -0.42
USP3-205ENST00000557884 APEX1P27695 318 aaKnown RBP12.42□□□□□ -0.42
USP3-205ENST00000557884 POLR2IP36954 125 aaKnown RBP12.42□□□□□ -0.42
USP3-205ENST00000557884 SLC25A1P53007 311 aa12.42□□□□□ -0.42
USP3-205ENST00000557884 ESRRGP62508 458 aa12.42□□□□□ -0.42
USP3-205ENST00000557884 TEKQ02763 1124 aa12.42□□□□□ -0.42
USP3-205ENST00000557884 HGFACQ04756 655 aa12.42□□□□□ -0.42
USP3-205ENST00000557884 GLO1Q04760 184 aa12.42□□□□□ -0.42
USP3-205ENST00000557884 PTGES3Q15185 160 aaKnown RBP12.42□□□□□ -0.42
USP3-205ENST00000557884 RCN1Q15293 331 aa12.42□□□□□ -0.42
USP3-205ENST00000557884 SNAPC1Q16533 368 aa12.42□□□□□ -0.42
USP3-205ENST00000557884 KRT80Q6KB66 452 aa12.42□□□□□ -0.42
USP3-205ENST00000557884 ZNF774Q6NX45 483 aa12.42□□□□□ -0.42
USP3-205ENST00000557884 PLBD1Q6P4A8 553 aa12.42□□□□□ -0.42
USP3-205ENST00000557884 LYPD4Q6UWN0 246 aa12.42□□□□□ -0.42
USP3-205ENST00000557884 C20orf204Q6ZNR8 217 aa12.42□□□□□ -0.42
USP3-205ENST00000557884 PAQR4Q8N4S7 273 aaPredicted RBP12.42□□□□□ -0.42
USP3-205ENST00000557884 ZNF611Q8N823 705 aa12.42□□□□□ -0.42
USP3-205ENST00000557884 CPEB3Q8NE35 698 aaKnown RBP12.42□□□□□ -0.42
USP3-205ENST00000557884 IL17RDQ8NFM7 739 aa12.42□□□□□ -0.42
USP3-205ENST00000557884 SLC26A10Q8NG04 563 aa12.42□□□□□ -0.42
USP3-205ENST00000557884 OR10H5Q8NGA6 315 aa12.42□□□□□ -0.42
USP3-205ENST00000557884 OR6K6Q8NGW6 343 aa12.42□□□□□ -0.42
USP3-205ENST00000557884 SMAP2Q8WU79 429 aaPredicted RBP12.42□□□□□ -0.42
USP3-205ENST00000557884 PLEKHA8Q96JA3 519 aa12.42□□□□□ -0.42
USP3-205ENST00000557884 CCL19Q99731 98 aa12.42□□□□□ -0.42
USP3-205ENST00000557884 TEX12Q9BXU0 123 aa12.42□□□□□ -0.42
USP3-205ENST00000557884 NMNAT2Q9BZQ4 307 aa12.42□□□□□ -0.42
USP3-205ENST00000557884 OR51V1Q9H2C8 321 aa12.42□□□□□ -0.42
USP3-205ENST00000557884 ASH2LQ9UBL3 628 aa12.42□□□□□ -0.42
USP3-205ENST00000557884 FBXL3Q9UKT7 428 aa12.42□□□□□ -0.42
USP3-205ENST00000557884 TIMM10BQ9Y5J6 103 aa12.42□□□□□ -0.42
USP3-205ENST00000557884 CADP27708 2225 aa12.42□□□□□ -0.42
USP3-205ENST00000557884 ANKRD17O75179 2603 aaKnown RBP12.41□□□□□ -0.42
USP3-205ENST00000557884 SOD3P08294 240 aa12.41□□□□□ -0.42
USP3-205ENST00000557884 CD53P19397 219 aa12.41□□□□□ -0.42
USP3-205ENST00000557884 PAICSP22234 425 aaKnown RBP12.41□□□□□ -0.42
USP3-205ENST00000557884 CCNOP22674 350 aa12.41□□□□□ -0.42
USP3-205ENST00000557884 APLNRP35414 380 aa12.41□□□□□ -0.42
USP3-205ENST00000557884 FABP6P51161 128 aa12.41□□□□□ -0.42
USP3-205ENST00000557884 LSM6P62312 80 aaKnown RBP12.41□□□□□ -0.42
USP3-205ENST00000557884 SCRN3Q0VDG4 424 aa12.41□□□□□ -0.42
USP3-205ENST00000557884 KCNMB1Q16558 191 aa12.41□□□□□ -0.42
USP3-205ENST00000557884 CORO6Q6QEF8 472 aa12.41□□□□□ -0.42
USP3-205ENST00000557884 LINC00346Q8IVM7 164 aa12.41□□□□□ -0.42
USP3-205ENST00000557884 OR4F15Q8NGB8 312 aa12.41□□□□□ -0.42
USP3-205ENST00000557884 DHRS9Q9BPW9 319 aa12.41□□□□□ -0.42
USP3-205ENST00000557884 C9orf16Q9BUW7 83 aa12.41□□□□□ -0.42
USP3-205ENST00000557884 OR51B6Q9H340 312 aa12.41□□□□□ -0.42
USP3-205ENST00000557884 CDH20Q9HBT6 801 aa12.41□□□□□ -0.42
USP3-205ENST00000557884 HINT3Q9NQE9 182 aaKnown RBP12.41□□□□□ -0.42
USP3-205ENST00000557884 MRPL22Q9NWU5 206 aaKnown RBP12.41□□□□□ -0.42
USP3-205ENST00000557884 ITGB1BP2Q9UKP3 347 aa12.41□□□□□ -0.42
USP3-205ENST00000557884 LAMP3Q9UQV4 416 aa12.41□□□□□ -0.42
USP3-205ENST00000557884 LHFPL6Q9Y693 200 aa12.41□□□□□ -0.42
USP3-205ENST00000557884 VPS13CQ709C8 3753 aa12.41□□□□□ -0.42
USP3-205ENST00000557884 CCDC168Q8NDH2 2452 aa12.4□□□□□ -0.42
USP3-205ENST00000557884 OTOGQ6ZRI0 2925 aa12.4□□□□□ -0.42
USP3-205ENST00000557884 ZAR1LA6NP61 321 aa12.4□□□□□ -0.42
USP3-205ENST00000557884 PRR23D1E9PI22 279 aaPredicted RBP12.4□□□□□ -0.42
USP3-205ENST00000557884 RER1O15258 196 aa12.4□□□□□ -0.42
USP3-205ENST00000557884 DOK2O60496 412 aa12.4□□□□□ -0.42
USP3-205ENST00000557884 PTHP01270 115 aa12.4□□□□□ -0.42
USP3-205ENST00000557884 ALPLP05186 524 aa12.4□□□□□ -0.42
USP3-205ENST00000557884 PRR23D2P0DMB1 279 aaPredicted RBP12.4□□□□□ -0.42
USP3-205ENST00000557884 ZNF35P13682 527 aa12.4□□□□□ -0.42
USP3-205ENST00000557884 STOMP27105 288 aa12.4□□□□□ -0.42
USP3-205ENST00000557884 RPS27P42677 84 aaKnown RBP12.4□□□□□ -0.42
USP3-205ENST00000557884 GDI2P50395 445 aaKnown RBP12.4□□□□□ -0.42
USP3-205ENST00000557884 ALDH3A2P51648 485 aa12.4□□□□□ -0.42
USP3-205ENST00000557884 GALK2Q01415 458 aa12.4□□□□□ -0.42
USP3-205ENST00000557884 SNTB2Q13425 540 aaKnown RBP12.4□□□□□ -0.42
USP3-205ENST00000557884 AQP6Q13520 282 aa12.4□□□□□ -0.42
USP3-205ENST00000557884 TBC1D28Q2M2D7 210 aa12.4□□□□□ -0.42
USP3-205ENST00000557884 ZIK1Q3SY52 487 aaPredicted RBP12.4□□□□□ -0.42
USP3-205ENST00000557884 KLHL12Q53G59 568 aa12.4□□□□□ -0.42
USP3-205ENST00000557884 SLX4IPQ5VYV7 408 aa12.4□□□□□ -0.42
USP3-205ENST00000557884 SYT9Q86SS6 491 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms