RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 SLC25A46Q96AG3 418 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 SMIM19Q96E16 107 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 SLC25A44Q96H78 314 aaPredicted RBP6.54□□□□□ -1.36
SPG11-204ENST00000557866 AGAP4Q96P64 663 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 ZNF385AQ96PM9 386 aaKnown RBP6.54□□□□□ -1.36
SPG11-204ENST00000557866 MNTQ99583 582 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 KCNS3Q9BQ31 491 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 PDCD1LG2Q9BQ51 273 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 TTTY12Q9BZ98 90 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 RNF32Q9H0A6 362 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 GALNT8Q9NY28 637 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 SLCO1C1Q9NYB5 712 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 PLEKHB1Q9UF11 243 aaPredicted RBP6.54□□□□□ -1.36
SPG11-204ENST00000557866 LAMP5Q9UJQ1 280 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 UGT2A1Q9Y4X1 527 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 CSAG2Q9Y5P2 127 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 MED12Q93074 2177 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 GVINP1Q7Z2Y8 2422 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 CPAMD8Q8IZJ3 1885 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 CELSR3Q9NYQ7 3312 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 A0A075B6Q4 140 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 OR4C45A6NMZ5 311 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 GJE1A6NN92 205 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 CLDN25C9JDP6 229 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 PIN1P1O15428 100 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 CXCL13O43927 109 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 EIF1BO60739 113 aaKnown RBP6.53□□□□□ -1.36
SPG11-204ENST00000557866 SULT1C4O75897 302 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 NCR1O76036 304 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 RPP14O95059 124 aaKnown RBP6.53□□□□□ -1.36
SPG11-204ENST00000557866 IGHG1P01857 330 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 HLA-DQA2P01906 255 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 SPARCP09486 303 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 ZNF43P17038 809 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 POU3F2P20265 443 aaPredicted RBP6.53□□□□□ -1.36
SPG11-204ENST00000557866 MAGEA5P43359 124 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 MAGEB1P43366 347 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 MEOX1P50221 254 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 LHX2P50458 406 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 RORCP51449 518 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 CCL11P51671 97 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 BLVRAP53004 296 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 RRADP55042 308 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 CARD18P57730 90 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 CSNK2A1P68400 391 aaPredicted RBP6.53□□□□□ -1.36
SPG11-204ENST00000557866 NHLH1Q02575 133 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 ROM1Q03395 351 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 GLO1Q04760 184 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 CDC20Q12834 499 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 HNRNPA0Q13151 305 aaKnown RBP6.53□□□□□ -1.36
SPG11-204ENST00000557866 ALKBH1Q13686 389 aaKnown RBP6.53□□□□□ -1.36
SPG11-204ENST00000557866 TRAM1Q15629 374 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 INAQ16352 499 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 HIST3H3Q16695 136 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 HYAL4Q2M3T9 481 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 CCDC58Q4VC31 144 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 ACSM3Q53FZ2 586 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 TEX30Q5JUR7 227 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 THEM4Q5T1C6 240 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 HBMQ6B0K9 141 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 SLC18B1Q6NT16 456 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 DNM1P34Q6PK57 102 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 ESPNLQ6ZVH7 1005 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 ASB18Q6ZVZ8 466 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 TRILQ7L0X0 811 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 KCTD20Q7Z5Y7 419 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 CEACAM19Q7Z692 300 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 NR2C2APQ86WQ0 139 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 EGFL6Q8IUX8 553 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 GLB1L2Q8IW92 636 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 MRPL41Q8IXM3 137 aaKnown RBP6.53□□□□□ -1.36
SPG11-204ENST00000557866 TMEM123Q8N131 208 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 PRSS35Q8N3Z0 413 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 FDCSPQ8NFU4 85 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 OR10D3Q8NH80 312 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 NEIL3Q8TAT5 605 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 ROBO4Q8WZ75 1007 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 HAS2Q92819 552 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 BORCS5Q969J3 196 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 TMEM54Q969K7 222 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 MCHR2Q969V1 340 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 MRPL48Q96GC5 212 aaKnown RBP6.53□□□□□ -1.36
SPG11-204ENST00000557866 SCMH1Q96GD3 660 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 ZNF845Q96IR2 970 aaPredicted RBP6.53□□□□□ -1.36
SPG11-204ENST00000557866 RBP7Q96R05 134 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 OR2M2Q96R28 347 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 OR8B4Q96RC9 309 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 NAA11Q9BSU3 229 aaPredicted RBP6.53□□□□□ -1.36
SPG11-204ENST00000557866 ABHD6Q9BV23 337 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 C6orf62Q9GZU0 229 aaPredicted RBP6.53□□□□□ -1.36
SPG11-204ENST00000557866 SLC6A15Q9H2J7 730 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 TPK1Q9H3S4 243 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 ELOVL3Q9HB03 270 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 SMURF1Q9HCE7 757 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 KLHL9Q9P2J3 617 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 POLHQ9Y253 713 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 GSTK1Q9Y2Q3 226 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 TMEM14AQ9Y6G1 99 aa6.53□□□□□ -1.36
SPG11-204ENST00000557866 CNOT1A5YKK6 2376 aaKnown RBP6.53□□□□□ -1.36
SPG11-204ENST00000557866 A0A0G2JK05 382 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms