RNA–Protein interactions for RNA: ENST00000557348.5

SHMT2-229, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,659 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-229ENST00000557348 HSF1Q00613 529 aa11.34□□□□□ -0.59
SHMT2-229ENST00000557348 MXD1Q05195 221 aa11.34□□□□□ -0.59
SHMT2-229ENST00000557348 MYBPHQ13203 477 aa11.34□□□□□ -0.59
SHMT2-229ENST00000557348 TP53I3Q53FA7 332 aa11.34□□□□□ -0.59
SHMT2-229ENST00000557348 B3GNTL1Q67FW5 361 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-229ENST00000557348 KRT74Q7RTS7 529 aa11.34□□□□□ -0.59
SHMT2-229ENST00000557348 OR6V1Q8N148 313 aa11.34□□□□□ -0.59
SHMT2-229ENST00000557348 OR56B4Q8NH76 319 aa11.34□□□□□ -0.59
SHMT2-229ENST00000557348 POC1BQ8TC44 478 aa11.34□□□□□ -0.59
SHMT2-229ENST00000557348 ASB10Q8WXI3 467 aa11.34□□□□□ -0.59
SHMT2-229ENST00000557348 PHF21AQ96BD5 680 aa11.34□□□□□ -0.59
SHMT2-229ENST00000557348 ARL5BQ96KC2 179 aa11.34□□□□□ -0.59
SHMT2-229ENST00000557348 PGLYRP3Q96LB9 341 aa11.34□□□□□ -0.59
SHMT2-229ENST00000557348 ADAD1Q96M93 576 aaKnown RBP11.34□□□□□ -0.59
SHMT2-229ENST00000557348 ZNF436Q9C0F3 470 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-229ENST00000557348 ZNF224Q9NZL3 707 aa11.34□□□□□ -0.59
SHMT2-229ENST00000557348 ATPIF1Q9UII2 106 aa11.34□□□□□ -0.59
SHMT2-229ENST00000557348 ST6GALNAC2Q9UJ37 374 aa11.34□□□□□ -0.59
SHMT2-229ENST00000557348 DKKL1Q9UK85 242 aa11.34□□□□□ -0.59
SHMT2-229ENST00000557348 B9D1Q9UPM9 204 aa11.34□□□□□ -0.59
SHMT2-229ENST00000557348 CACNA1HO95180 2353 aa11.34□□□□□ -0.59
SHMT2-229ENST00000557348 TRAV1-2A0A0B4J238 106 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 TRBV2A0A0J9YWF9 115 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 hCG_1807616A0A1W2PRN6 198 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 SLC22A23A1A5C7 686 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 MS4A18H0YCH9 400 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 DNPH1O43598 174 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 RAD1O60671 282 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 HPGDSO60760 199 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 SC5DO75845 299 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 PAHP00439 452 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 EDNRAP25101 427 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 MAPK3P27361 379 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-229ENST00000557348 DLSTP36957 453 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 CAMK2DQ13557 499 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 EXOSC2Q13868 293 aaKnown RBP11.33□□□□□ -0.6
SHMT2-229ENST00000557348 FCN2Q15485 313 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 MS4A18Q3C1V0 323 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 ZNF684Q5T5D7 378 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 PRAMEF20Q5VT98 475 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 SLC18B1Q6NT16 456 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 KCTD18Q6PI47 426 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-229ENST00000557348 TMEM91Q6ZNR0 172 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 SLC35D2Q76EJ3 337 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 BTN2A1Q7KYR7 527 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 SSX6Q7RTT6 188 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 UEVLDQ8IX04 471 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 OR6N2Q8NGY6 317 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 OTOSQ8NHW6 89 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 ABHD4Q8TB40 342 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 RPS4Y2Q8TD47 263 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 GHSRQ92847 366 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 PIGQQ9BRB3 760 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 THAP7Q9BT49 309 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-229ENST00000557348 SHARPINQ9H0F6 387 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 ABCG5Q9H222 651 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 RERGLQ9H628 205 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 FAM86C1Q9NVL1 165 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 FBXL2Q9UKC9 423 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 IGLV1-36A0A0B4J1U3 117 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 A0A1W2PPL8 197 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 CD8B2A6NJW9 211 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 OR6C65A6NJZ3 312 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 H3BML4 177 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 VAMP5O95183 116 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 HRGP04196 525 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 CELA2AP08217 269 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 CCL3P10147 92 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 CD8BP10966 210 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 ATF4P18848 351 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-229ENST00000557348 DNASE1P24855 282 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 SRD5A2P31213 254 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 CYB561P49447 251 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 CSNK2A1P68400 391 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-229ENST00000557348 POU3F1Q03052 451 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-229ENST00000557348 SLC3A1Q07837 685 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 RASGEF1BQ0VAM2 473 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 ACER2Q5QJU3 275 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 PXDC1Q5TGL8 231 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 DHRS13Q6UX07 377 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 MIB2Q96AX9 1013 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 CCDC120Q96HB5 630 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 RBP7Q96R05 134 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 KCNK17Q96T54 332 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 HDHD2Q9H0R4 259 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 B3GAT2Q9NPZ5 323 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 FOXJ2Q9P0K8 574 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 COPS3Q9UNS2 423 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 RASD1Q9Y272 281 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 ZNF281Q9Y2X9 895 aa11.33□□□□□ -0.6
SHMT2-229ENST00000557348 MRPS18CQ9Y3D5 142 aaKnown RBP11.33□□□□□ -0.6
SHMT2-229ENST00000557348 DNAH14Q0VDD8 3507 aa11.32□□□□□ -0.6
SHMT2-229ENST00000557348 H7C1C5 153 aa11.32□□□□□ -0.6
SHMT2-229ENST00000557348 LINC01387J3KSC0 135 aa11.32□□□□□ -0.6
SHMT2-229ENST00000557348 M0R233 179 aa11.32□□□□□ -0.6
SHMT2-229ENST00000557348 TERTO14746 1132 aaKnown RBP11.32□□□□□ -0.6
SHMT2-229ENST00000557348 GSTZ1O43708 216 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-229ENST00000557348 TLX3O43711 291 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-229ENST00000557348 SLC16A7O60669 478 aa11.32□□□□□ -0.6
SHMT2-229ENST00000557348 KHDRBS3O75525 346 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms