RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 PRSS23O95084 383 aa7.34□□□□□ -1.23
VRK1-206ENST00000557222 LYPD3O95274 346 aa7.34□□□□□ -1.23
VRK1-206ENST00000557222 CH25HO95992 272 aa7.34□□□□□ -1.23
VRK1-206ENST00000557222 CD55P08174 381 aa7.34□□□□□ -1.23
VRK1-206ENST00000557222 ASAH2BP0C7U1 165 aa7.34□□□□□ -1.23
VRK1-206ENST00000557222 TUBG1P23258 451 aa7.34□□□□□ -1.23
VRK1-206ENST00000557222 GCH1P30793 250 aa7.34□□□□□ -1.23
VRK1-206ENST00000557222 ATP4BP51164 291 aa7.34□□□□□ -1.23
VRK1-206ENST00000557222 ZNF81P51508 661 aa7.34□□□□□ -1.23
VRK1-206ENST00000557222 MMP15P51511 669 aa7.34□□□□□ -1.23
VRK1-206ENST00000557222 CLRN1P58418 232 aa7.34□□□□□ -1.23
VRK1-206ENST00000557222 UBA52P62987 128 aaKnown RBP7.34□□□□□ -1.23
VRK1-206ENST00000557222 MRPS34P82930 218 aaKnown RBP7.34□□□□□ -1.23
VRK1-206ENST00000557222 NPTX1Q15818 432 aa7.34□□□□□ -1.23
VRK1-206ENST00000557222 ALKBH6Q3KRA9 238 aa7.34□□□□□ -1.23
VRK1-206ENST00000557222 ZMAT1Q5H9K5 638 aa7.34□□□□□ -1.23
VRK1-206ENST00000557222 PAGE3Q5JUK9 113 aa7.34□□□□□ -1.23
VRK1-206ENST00000557222 ENTPD8Q5MY95 495 aa7.34□□□□□ -1.23
VRK1-206ENST00000557222 AVPI1Q5T686 147 aa7.34□□□□□ -1.23
VRK1-206ENST00000557222 MBNL2Q5VZF2 373 aaKnown RBP7.34□□□□□ -1.23
VRK1-206ENST00000557222 RBMS3Q6XE24 437 aaKnown RBP7.34□□□□□ -1.23
VRK1-206ENST00000557222 PATL1Q86TB9 770 aaKnown RBP7.34□□□□□ -1.23
VRK1-206ENST00000557222 C10orf111Q8N326 155 aa7.34□□□□□ -1.23
VRK1-206ENST00000557222 PAQR4Q8N4S7 273 aaPredicted RBP7.34□□□□□ -1.23
VRK1-206ENST00000557222 RASSF5Q8WWW0 418 aa7.34□□□□□ -1.23
VRK1-206ENST00000557222 DVL3Q92997 716 aaPredicted RBP7.34□□□□□ -1.23
VRK1-206ENST00000557222 C7orf26Q96N11 449 aa7.34□□□□□ -1.23
VRK1-206ENST00000557222 TSPAN32Q96QS1 320 aa7.34□□□□□ -1.23
VRK1-206ENST00000557222 SLC6A7Q99884 636 aa7.34□□□□□ -1.23
VRK1-206ENST00000557222 WFDC6Q9BQY6 131 aa7.34□□□□□ -1.23
VRK1-206ENST00000557222 POLR2J2Q9GZM3 115 aaKnown RBP7.34□□□□□ -1.23
VRK1-206ENST00000557222 POLR2J3Q9H1A7 115 aaKnown RBP7.34□□□□□ -1.23
VRK1-206ENST00000557222 TUBG2Q9NRH3 451 aa7.34□□□□□ -1.23
VRK1-206ENST00000557222 PRR13Q9NZ81 148 aa7.34□□□□□ -1.23
VRK1-206ENST00000557222 OPN4Q9UHM6 478 aa7.34□□□□□ -1.23
VRK1-206ENST00000557222 KLHL21Q9UJP4 597 aa7.34□□□□□ -1.23
VRK1-206ENST00000557222 VWFP04275 2813 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 NOTCH1P46531 2555 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 HTR3EA5X5Y0 456 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 M0QX08 132 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 SHOXO15266 292 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 TSPAN19P0C672 248 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 CCL2P13500 99 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 PRTN3P24158 256 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 STOMP27105 288 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 DAP3P51398 398 aaKnown RBP7.33□□□□□ -1.24
VRK1-206ENST00000557222 HSF2Q03933 536 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 TAF11Q15544 211 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 DUSP7Q16829 419 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 RUNDC3AQ59EK9 446 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 LCE4AQ5TA78 99 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 DLEU7Q6UYE1 221 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 DOK3Q7L591 496 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 NANOGNBQ7Z5D8 188 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 ZER1Q7Z7L7 766 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 PTOV1Q86YD1 416 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 DPP10Q8N608 796 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 NOXO1Q8NFA2 376 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 OR6T1Q8NGN1 323 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 OR1J1Q8NGS3 322 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 FNDC8Q8TC99 324 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 ST7LQ8TDW4 575 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 ADAMTS16Q8TE57 1224 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 TSPEARQ8WU66 669 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 LIPHQ8WWY8 451 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 STON2Q8WXE9 905 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 CCL17Q92583 94 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 LRRC58Q96CX6 371 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 MARS2Q96GW9 593 aaKnown RBP7.33□□□□□ -1.24
VRK1-206ENST00000557222 POM121L2Q96KW2 1035 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 GAL3ST1Q99999 423 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 CPPED1Q9BRF8 314 aaPredicted RBP7.33□□□□□ -1.24
VRK1-206ENST00000557222 WACQ9BTA9 647 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 RABEP2Q9H5N1 569 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 IKZF5Q9H5V7 419 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 ELOVL3Q9HB03 270 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 CCNB1IP1Q9NPC3 277 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 ESM1Q9NQ30 184 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 CCDC167Q9P0B6 97 aa7.33□□□□□ -1.24
VRK1-206ENST00000557222 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.33□□□□□ -1.24
VRK1-206ENST00000557222 ARHGAP32A7KAX9 2087 aa7.32□□□□□ -1.24
VRK1-206ENST00000557222 CPSF4LA6NMK7 179 aaKnown RBP7.32□□□□□ -1.24
VRK1-206ENST00000557222 MCIDASD6RGH6 385 aa7.32□□□□□ -1.24
VRK1-206ENST00000557222 BLOC1S5-TXNDC5H3BN57 136 aa7.32□□□□□ -1.24
VRK1-206ENST00000557222 CLDN34H7C241 214 aa7.32□□□□□ -1.24
VRK1-206ENST00000557222 M0R3H8 397 aa7.32□□□□□ -1.24
VRK1-206ENST00000557222 ZNF500O60304 480 aaPredicted RBP7.32□□□□□ -1.24
VRK1-206ENST00000557222 TRMUO75648 421 aaKnown RBP7.32□□□□□ -1.24
VRK1-206ENST00000557222 ZNF205O95201 554 aa7.32□□□□□ -1.24
VRK1-206ENST00000557222 IGHV1-46P01743 117 aa7.32□□□□□ -1.24
VRK1-206ENST00000557222 MT-ND1P03886 318 aa7.32□□□□□ -1.24
VRK1-206ENST00000557222 THY1P04216 161 aa7.32□□□□□ -1.24
VRK1-206ENST00000557222 PPIAL4GP0DN37 164 aa7.32□□□□□ -1.24
VRK1-206ENST00000557222 ACADSP16219 412 aa7.32□□□□□ -1.24
VRK1-206ENST00000557222 VAMP1P23763 118 aa7.32□□□□□ -1.24
VRK1-206ENST00000557222 AQP1P29972 269 aa7.32□□□□□ -1.24
VRK1-206ENST00000557222 RBM34P42696 430 aaKnown RBP7.32□□□□□ -1.24
VRK1-206ENST00000557222 UGT2B15P54855 530 aa7.32□□□□□ -1.24
VRK1-206ENST00000557222 LINC00310P59036 64 aa7.32□□□□□ -1.24
VRK1-206ENST00000557222 MAGOHP61326 146 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms