RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 ARR3P36575 388 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 RPL5P46777 297 aaKnown RBP8.11□□□□□ -1.11
ACTN1-218ENST00000556343 GBX2P52951 348 aaPredicted RBP8.11□□□□□ -1.11
ACTN1-218ENST00000556343 NR1H2P55055 460 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 CDH15P55291 814 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 UBE2NP61088 152 aaKnown RBP8.11□□□□□ -1.11
ACTN1-218ENST00000556343 PLP2Q04941 152 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 FOXF2Q12947 444 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 ECH1Q13011 328 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 AQP6Q13520 282 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 MED22Q15528 200 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 TBCEQ15813 527 aaPredicted RBP8.11□□□□□ -1.11
ACTN1-218ENST00000556343 PCK2Q16822 640 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 SLC25A35Q3KQZ1 300 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 VWA1Q6PCB0 445 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 DEGS2Q6QHC5 323 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 ZNF322Q6U7Q0 402 aaPredicted RBP8.11□□□□□ -1.11
ACTN1-218ENST00000556343 KCTD8Q6ZWB6 473 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 ZNF367Q7RTV3 350 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.11□□□□□ -1.11
ACTN1-218ENST00000556343 KRT77Q7Z794 578 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 MRGPRGQ86SM5 289 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 LHFPL3Q86UP9 236 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 WDFY1Q8IWB7 410 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 ALDH16A1Q8IZ83 802 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 SYS1Q8N2H4 156 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 NANOGP1Q8N7R0 232 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 ZNF610Q8N9Z0 462 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 C1orf162Q8NEQ5 155 aaPredicted RBP8.11□□□□□ -1.11
ACTN1-218ENST00000556343 ZNRF4Q8WWF5 429 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 FOXN4Q96NZ1 517 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 DMRTA2Q96SC8 542 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 NIPAL2Q9H841 368 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 OBP2BQ9NPH6 170 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 MRPL22Q9NWU5 206 aaKnown RBP8.11□□□□□ -1.11
ACTN1-218ENST00000556343 Q9UFV3 132 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 CYB5R1Q9UHQ9 305 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 ERRFI1Q9UJM3 462 aaPredicted RBP8.11□□□□□ -1.11
ACTN1-218ENST00000556343 IKZF2Q9UKS7 526 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 FBXL3Q9UKT7 428 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 UGT2A1Q9Y4X1 527 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 TIMM10BQ9Y5J6 103 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 RP1L1Q8IWN7 2480 aaPredicted RBP8.11□□□□□ -1.11
ACTN1-218ENST00000556343 A0A1W2PQL4 384 aaPredicted RBP8.1□□□□□ -1.11
ACTN1-218ENST00000556343 METTL15A6NJ78 407 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 EEF1E1-BLOC1S5C9J1V9 151 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 J3QLW9 94 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 EEF1E1O43324 174 aaKnown RBP8.1□□□□□ -1.11
ACTN1-218ENST00000556343 MPZL1O95297 269 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 GPANK1O95872 356 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 WNT11O96014 354 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 PTHP01270 115 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 H2BFMP0C1H6 154 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 B4GALT1P15291 398 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 ZNF19P17023 458 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 BMP5P22003 454 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 IL32P24001 234 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 CHRNB4P30926 498 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 TTKP33981 857 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 ETV1P50549 477 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 RIDAP52758 137 aaKnown RBP8.1□□□□□ -1.11
ACTN1-218ENST00000556343 WNT4P56705 351 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 TAS2R43P59537 309 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 GRB2P62993 217 aaKnown RBP8.1□□□□□ -1.11
ACTN1-218ENST00000556343 TLE1Q04724 770 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 EMX1Q04741 257 aaPredicted RBP8.1□□□□□ -1.11
ACTN1-218ENST00000556343 PIGFQ07326 219 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 IRF3Q14653 427 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 SPHARQ15513 63 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 NEDD8Q15843 81 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 MEP1BQ16820 701 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 DCXRQ7Z4W1 244 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 P2RY8Q86VZ1 359 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 ZNF679Q8IYX0 411 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 LRRC18Q8N456 261 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 C17orf78Q8N4C9 275 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 YIPF7Q8N8F6 280 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 STEAP2Q8NFT2 490 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 OR1K1Q8NGR3 316 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 PRR7Q8TB68 274 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 SPTSSAQ969W0 71 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 ZNF416Q9BWM5 594 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 OPN3Q9H1Y3 402 aaPredicted RBP8.1□□□□□ -1.11
ACTN1-218ENST00000556343 SP140LQ9H930 580 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 EMC7Q9NPA0 242 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 ISYNA1Q9NPH2 558 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 ACOT13Q9NPJ3 140 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 TRIM36Q9NQ86 728 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 CENPMQ9NSP4 180 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 PAK1IP1Q9NWT1 392 aaPredicted RBP8.1□□□□□ -1.11
ACTN1-218ENST00000556343 BABAM2Q9NXR7 383 aa8.1□□□□□ -1.11
ACTN1-218ENST00000556343 GDF2Q9UK05 429 aaPredicted RBP8.1□□□□□ -1.11
ACTN1-218ENST00000556343 IQCMA0A1B0GVH7 501 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 TRIM64CA6NLI5 447 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 A8MXE2 369 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 ZNF878C9JN71 531 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 LIMS3P0CW19 117 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 LIMS4P0CW20 117 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 CD79AP11912 226 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 JUNBP17275 347 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms