RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 PAQR4Q8N4S7 273 aaPredicted RBP9.94□□□□□ -0.82
SLIRP-205ENST00000556310 OR9Q2Q8NGE9 314 aa9.94□□□□□ -0.82
SLIRP-205ENST00000556310 OR2T29Q8NH02 315 aa9.94□□□□□ -0.82
SLIRP-205ENST00000556310 MRPL24Q96A35 216 aaKnown RBP9.94□□□□□ -0.82
SLIRP-205ENST00000556310 SORCS2Q96PQ0 1159 aa9.94□□□□□ -0.82
SLIRP-205ENST00000556310 SMR3AQ99954 134 aa9.94□□□□□ -0.82
SLIRP-205ENST00000556310 BTBD10Q9BSF8 475 aa9.94□□□□□ -0.82
SLIRP-205ENST00000556310 WACQ9BTA9 647 aa9.94□□□□□ -0.82
SLIRP-205ENST00000556310 SYT4Q9H2B2 425 aa9.94□□□□□ -0.82
SLIRP-205ENST00000556310 LRMDAQ9H2I8 198 aa9.94□□□□□ -0.82
SLIRP-205ENST00000556310 REEP1Q9H902 201 aa9.94□□□□□ -0.82
SLIRP-205ENST00000556310 POLE4Q9NR33 117 aa9.94□□□□□ -0.82
SLIRP-205ENST00000556310 TMEM129A0AVI4 362 aa9.93□□□□□ -0.82
SLIRP-205ENST00000556310 DHRS12A0PJE2 317 aa9.93□□□□□ -0.82
SLIRP-205ENST00000556310 C12orf71A8MTZ7 269 aa9.93□□□□□ -0.82
SLIRP-205ENST00000556310 SMAD7O15105 426 aaKnown RBP9.93□□□□□ -0.82
SLIRP-205ENST00000556310 DNAJC8O75937 253 aaPredicted RBP9.93□□□□□ -0.82
SLIRP-205ENST00000556310 CCNB2O95067 398 aa9.93□□□□□ -0.82
SLIRP-205ENST00000556310 CCL2P13500 99 aa9.93□□□□□ -0.82
SLIRP-205ENST00000556310 APEX1P27695 318 aaKnown RBP9.93□□□□□ -0.82
SLIRP-205ENST00000556310 PCSK6P29122 969 aa9.93□□□□□ -0.82
SLIRP-205ENST00000556310 RIPPLY3P57055 190 aa9.93□□□□□ -0.82
SLIRP-205ENST00000556310 GK3PQ14409 553 aa9.93□□□□□ -0.82
SLIRP-205ENST00000556310 MSMPQ1L6U9 139 aa9.93□□□□□ -0.82
SLIRP-205ENST00000556310 ZNF770Q6IQ21 691 aaPredicted RBP9.93□□□□□ -0.82
SLIRP-205ENST00000556310 DNM1P34Q6PK57 102 aa9.93□□□□□ -0.82
SLIRP-205ENST00000556310 CLEC9AQ6UXN8 241 aa9.93□□□□□ -0.82
SLIRP-205ENST00000556310 SYT9Q86SS6 491 aa9.93□□□□□ -0.82
SLIRP-205ENST00000556310 ZNF525Q8N782 197 aa9.93□□□□□ -0.82
SLIRP-205ENST00000556310 SAMD8Q96LT4 415 aa9.93□□□□□ -0.82
SLIRP-205ENST00000556310 ERMAPQ96PL5 475 aaPredicted RBP9.93□□□□□ -0.82
SLIRP-205ENST00000556310 SNX18Q96RF0 628 aa9.93□□□□□ -0.82
SLIRP-205ENST00000556310 DOK1Q99704 481 aa9.93□□□□□ -0.82
SLIRP-205ENST00000556310 VRK1Q99986 396 aaPredicted RBP9.93□□□□□ -0.82
SLIRP-205ENST00000556310 RHNO1Q9BSD3 238 aa9.93□□□□□ -0.82
SLIRP-205ENST00000556310 IFT27Q9BW83 186 aa9.93□□□□□ -0.82
SLIRP-205ENST00000556310 ZNF416Q9BWM5 594 aa9.93□□□□□ -0.82
SLIRP-205ENST00000556310 MRPL37Q9BZE1 423 aaKnown RBP9.93□□□□□ -0.82
SLIRP-205ENST00000556310 OR2H1Q9GZK4 316 aa9.93□□□□□ -0.82
SLIRP-205ENST00000556310 WNT5BQ9H1J7 359 aa9.93□□□□□ -0.82
SLIRP-205ENST00000556310 GSX1Q9H4S2 264 aaPredicted RBP9.93□□□□□ -0.82
SLIRP-205ENST00000556310 DYNLRB1Q9NP97 96 aa9.93□□□□□ -0.82
SLIRP-205ENST00000556310 VNN3Q9NY84 501 aa9.93□□□□□ -0.82
SLIRP-205ENST00000556310 SAMHD1Q9Y3Z3 626 aaKnown RBP9.93□□□□□ -0.82
SLIRP-205ENST00000556310 CDH10Q9Y6N8 788 aa9.93□□□□□ -0.82
SLIRP-205ENST00000556310 NAV3Q8IVL0 2385 aa9.93□□□□□ -0.82
SLIRP-205ENST00000556310 IDH3BO43837 385 aa9.92□□□□□ -0.82
SLIRP-205ENST00000556310 SLC16A7O60669 478 aa9.92□□□□□ -0.82
SLIRP-205ENST00000556310 KHDRBS3O75525 346 aaKnown RBP9.92□□□□□ -0.82
SLIRP-205ENST00000556310 HEXAP06865 529 aa9.92□□□□□ -0.82
SLIRP-205ENST00000556310 FAM157BP0CG42 384 aa9.92□□□□□ -0.82
SLIRP-205ENST00000556310 STOMP27105 288 aa9.92□□□□□ -0.82
SLIRP-205ENST00000556310 CRABP1P29762 137 aa9.92□□□□□ -0.82
SLIRP-205ENST00000556310 CDKN2AP42771 156 aaKnown RBP9.92□□□□□ -0.82
SLIRP-205ENST00000556310 PSG4Q00888 419 aa9.92□□□□□ -0.82
SLIRP-205ENST00000556310 SCRN3Q0VDG4 424 aa9.92□□□□□ -0.82
SLIRP-205ENST00000556310 BNIP1Q12981 228 aa9.92□□□□□ -0.82
SLIRP-205ENST00000556310 FLOT2Q14254 428 aa9.92□□□□□ -0.82
SLIRP-205ENST00000556310 JAZF1Q86VZ6 243 aa9.92□□□□□ -0.82
SLIRP-205ENST00000556310 GLB1L2Q8IW92 636 aa9.92□□□□□ -0.82
SLIRP-205ENST00000556310 AQP11Q8NBQ7 271 aa9.92□□□□□ -0.82
SLIRP-205ENST00000556310 CPEB3Q8NE35 698 aaKnown RBP9.92□□□□□ -0.82
SLIRP-205ENST00000556310 OR10H5Q8NGA6 315 aa9.92□□□□□ -0.82
SLIRP-205ENST00000556310 OR52L1Q8NGH7 329 aa9.92□□□□□ -0.82
SLIRP-205ENST00000556310 AKR7LQ8NHP1 331 aa9.92□□□□□ -0.82
SLIRP-205ENST00000556310 POM121L2Q96KW2 1035 aa9.92□□□□□ -0.82
SLIRP-205ENST00000556310 DGCR6LQ9BY27 220 aa9.92□□□□□ -0.82
SLIRP-205ENST00000556310 REG4Q9BYZ8 158 aa9.92□□□□□ -0.82
SLIRP-205ENST00000556310 BCL2L14Q9BZR8 327 aa9.92□□□□□ -0.82
SLIRP-205ENST00000556310 NUAK2Q9H093 628 aa9.92□□□□□ -0.82
SLIRP-205ENST00000556310 RAB1BQ9H0U4 201 aa9.92□□□□□ -0.82
SLIRP-205ENST00000556310 MYOZ1Q9NP98 299 aaPredicted RBP9.92□□□□□ -0.82
SLIRP-205ENST00000556310 EMC7Q9NPA0 242 aa9.92□□□□□ -0.82
SLIRP-205ENST00000556310 TIMM10BQ9Y5J6 103 aa9.92□□□□□ -0.82
SLIRP-205ENST00000556310 HIVEP2P31629 2446 aa9.92□□□□□ -0.82
SLIRP-205ENST00000556310 LOC100509620A0A075B734 347 aa9.91□□□□□ -0.82
SLIRP-205ENST00000556310 IGHV4-30-2A0A087WSY4 118 aa9.91□□□□□ -0.82
SLIRP-205ENST00000556310 IGLV1-36A0A0B4J1U3 117 aa9.91□□□□□ -0.82
SLIRP-205ENST00000556310 M0R233 179 aa9.91□□□□□ -0.82
SLIRP-205ENST00000556310 SYNGR3O43761 229 aa9.91□□□□□ -0.82
SLIRP-205ENST00000556310 LY6HO94772 140 aa9.91□□□□□ -0.82
SLIRP-205ENST00000556310 RENP00797 406 aa9.91□□□□□ -0.82
SLIRP-205ENST00000556310 SCG5P05408 212 aa9.91□□□□□ -0.82
SLIRP-205ENST00000556310 ERCC1P07992 297 aaPredicted RBP9.91□□□□□ -0.82
SLIRP-205ENST00000556310 SLC25A16P16260 332 aa9.91□□□□□ -0.82
SLIRP-205ENST00000556310 HIST1H1CP16403 213 aaKnown RBP9.91□□□□□ -0.82
SLIRP-205ENST00000556310 GSTM3P21266 225 aa9.91□□□□□ -0.82
SLIRP-205ENST00000556310 NOS3P29474 1203 aa9.91□□□□□ -0.82
SLIRP-205ENST00000556310 RAD52P43351 418 aa9.91□□□□□ -0.82
SLIRP-205ENST00000556310 GDI2P50395 445 aaKnown RBP9.91□□□□□ -0.82
SLIRP-205ENST00000556310 UCP2P55851 309 aa9.91□□□□□ -0.82
SLIRP-205ENST00000556310 LSM6P62312 80 aaKnown RBP9.91□□□□□ -0.82
SLIRP-205ENST00000556310 PPP1R8Q12972 351 aaKnown RBP9.91□□□□□ -0.82
SLIRP-205ENST00000556310 AQP6Q13520 282 aa9.91□□□□□ -0.82
SLIRP-205ENST00000556310 MICAQ29983 383 aa9.91□□□□□ -0.82
SLIRP-205ENST00000556310 RGS7BPQ6MZT1 257 aaPredicted RBP9.91□□□□□ -0.82
SLIRP-205ENST00000556310 ZNF774Q6NX45 483 aa9.91□□□□□ -0.82
SLIRP-205ENST00000556310 LEG1Q6P5S2 330 aa9.91□□□□□ -0.82
SLIRP-205ENST00000556310 UGT2A3Q6UWM9 527 aa9.91□□□□□ -0.82
SLIRP-205ENST00000556310 UNQ6126/PRO20091Q6UXV3 157 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms