RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 EURLQ9NYK6 297 aa2.39□□□□□ -2.03
EFCAB11-210ENST00000556078 ZNF282Q9UDV7 671 aaPredicted RBP2.39□□□□□ -2.03
EFCAB11-210ENST00000556078 SEC14L4Q9UDX3 406 aa2.39□□□□□ -2.03
EFCAB11-210ENST00000556078 NXT1Q9UKK6 140 aaKnown RBP2.39□□□□□ -2.03
EFCAB11-210ENST00000556078 ZNF346Q9UL40 294 aaKnown RBP2.39□□□□□ -2.03
EFCAB11-210ENST00000556078 KLF13Q9Y2Y9 288 aaPredicted RBP2.39□□□□□ -2.03
EFCAB11-210ENST00000556078 WDR45Q9Y484 360 aa2.39□□□□□ -2.03
EFCAB11-210ENST00000556078 AP4B1Q9Y6B7 739 aa2.39□□□□□ -2.03
EFCAB11-210ENST00000556078 VPS13DQ5THJ4 4388 aa2.39□□□□□ -2.03
EFCAB11-210ENST00000556078 DNAH2Q9P225 4427 aa2.39□□□□□ -2.03
EFCAB11-210ENST00000556078 IGHV4-4A0A075B6R2 117 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 TRGV5A0A0B4J1U4 118 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 CXorf51AA0A1B0GTR3 108 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 A0A1W2PP18 115 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 A0A1W2PR80 420 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 GOLGA6L4A6NEF3 574 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 HELTA6NFD8 242 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 ZSCAN5BA6NJL1 495 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 FAM74A7A6NL05 159 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 E9PBE3 544 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 PPIAL4DF5H284 164 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 SGK494L7N484 410 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 PSMD11O00231 422 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 KMOO15229 486 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 CLOCKO15516 846 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 SNNO75324 88 aaPredicted RBP2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 MTRF1O75570 445 aaKnown RBP2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 SCGNO76038 276 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 LRATO95237 230 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 ANGPTL1O95841 491 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 CLPTM1O96005 669 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 HPRP00739 348 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 ALOX5P09917 674 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 HSMCR30P0CW71 290 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 ANXA3P12429 323 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 HSD17B1P14061 328 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 ZNF44P15621 663 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 UQCRC2P22695 453 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 CXCR2P25025 360 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 GTF2H1P32780 548 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 SSR1P43307 286 aaKnown RBP2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 ATP5OP48047 213 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 CEBPDP49716 269 aaPredicted RBP2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 STC1P52823 247 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 SLC8A3P57103 927 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 RPS27AP62979 156 aaKnown RBP2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 BCL2L1Q07817 233 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 MFGE8Q08431 387 aaPredicted RBP2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 ORC2Q13416 577 aaPredicted RBP2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 EIF2B1Q14232 305 aaKnown RBP2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 SLC17A1Q14916 467 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 TAB1Q15750 504 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 SLC1A5Q15758 541 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 ZSWIM7Q19AV6 140 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 FAM74A3Q4VXF1 159 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 BEX5Q5H9J7 111 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 TTC23Q5W5X9 447 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 FRMPD2BQ6IN97 320 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 SPESP1Q6UW49 350 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 APOOLQ6UXV4 268 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 RPS19BP1Q86WX3 136 aaKnown RBP2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 CDKL3Q8IVW4 592 aaPredicted RBP2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 SLC38A6Q8IZM9 456 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 BBS5Q8N3I7 341 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 GVQW1Q8N7I0 195 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 BBOF1Q8ND07 529 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 OR4F17Q8NGA8 305 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 OR4F5Q8NH21 305 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 PIH1D2Q8WWB5 315 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 P3H4Q92791 437 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 LHX4Q969G2 390 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 SDSLQ96GA7 329 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 LRR1Q96L50 414 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 HSFY1Q96LI6 401 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 OR4F4Q96R69 305 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 MCCC1Q96RQ3 725 aaPredicted RBP2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 NPY6RQ99463 290 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 CCDC77Q9BR77 488 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 SLC39A3Q9BRY0 314 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 TIMM29Q9BSF4 260 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 CLEC7AQ9BXN2 247 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 PKIBQ9C010 78 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 HOXD1Q9GZZ0 328 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 YY1AP1Q9H869 796 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 NRN1Q9NPD7 142 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 ACP6Q9NPH0 428 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 AIPL1Q9NZN9 384 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 MGAT4AQ9UM21 535 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 KLHDC2Q9Y2U9 406 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 TMED5Q9Y3A6 229 aa2.38□□□□□ -2.03
EFCAB11-210ENST00000556078 PPIAL4CA0A0B4J2A2 164 aa2.37□□□□□ -2.03
EFCAB11-210ENST00000556078 XKRY2A2RUG3 117 aa2.37□□□□□ -2.03
EFCAB11-210ENST00000556078 LRIT2A6NDA9 550 aa2.37□□□□□ -2.03
EFCAB11-210ENST00000556078 LRRC30A6NM36 301 aa2.37□□□□□ -2.03
EFCAB11-210ENST00000556078 SRRM4A7MD48 611 aaKnown RBP2.37□□□□□ -2.03
EFCAB11-210ENST00000556078 P2RY10O00398 339 aa2.37□□□□□ -2.03
EFCAB11-210ENST00000556078 LSM1O15116 133 aaKnown RBP2.37□□□□□ -2.03
EFCAB11-210ENST00000556078 PCDH7O60245 1069 aa2.37□□□□□ -2.03
EFCAB11-210ENST00000556078 TSPAN2O60636 221 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms