RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 HRGP04196 525 aa8.98□□□□□ -0.97
SRP54-208ENST00000555557 EDN3P14138 238 aa8.98□□□□□ -0.97
SRP54-208ENST00000555557 B4GALT1P15291 398 aa8.98□□□□□ -0.97
SRP54-208ENST00000555557 LIPAP38571 399 aa8.98□□□□□ -0.97
SRP54-208ENST00000555557 GUCA1AP43080 201 aaPredicted RBP8.98□□□□□ -0.97
SRP54-208ENST00000555557 ZNF84P51523 738 aa8.98□□□□□ -0.97
SRP54-208ENST00000555557 ARMCX4Q5H9R4 360 aa8.98□□□□□ -0.97
SRP54-208ENST00000555557 RIPPLY2Q5TAB7 128 aa8.98□□□□□ -0.97
SRP54-208ENST00000555557 DCXRQ7Z4W1 244 aa8.98□□□□□ -0.97
SRP54-208ENST00000555557 GPR141Q7Z602 305 aa8.98□□□□□ -0.97
SRP54-208ENST00000555557 KLBQ86Z14 1044 aa8.98□□□□□ -0.97
SRP54-208ENST00000555557 ZFP41Q8N8Y5 198 aa8.98□□□□□ -0.97
SRP54-208ENST00000555557 MGLLQ99685 303 aa8.98□□□□□ -0.97
SRP54-208ENST00000555557 TM9SF2Q99805 663 aa8.98□□□□□ -0.97
SRP54-208ENST00000555557 TTYH2Q9BSA4 534 aa8.98□□□□□ -0.97
SRP54-208ENST00000555557 ZNF416Q9BWM5 594 aa8.98□□□□□ -0.97
SRP54-208ENST00000555557 LINC00470Q9BZP3 86 aa8.98□□□□□ -0.97
SRP54-208ENST00000555557 INPP5EQ9NRR6 644 aa8.98□□□□□ -0.97
SRP54-208ENST00000555557 ASH2LQ9UBL3 628 aa8.98□□□□□ -0.97
SRP54-208ENST00000555557 CYB5R1Q9UHQ9 305 aa8.98□□□□□ -0.97
SRP54-208ENST00000555557 ZNF835Q9Y2P0 537 aa8.98□□□□□ -0.97
SRP54-208ENST00000555557 CAB39Q9Y376 341 aaPredicted RBP8.98□□□□□ -0.97
SRP54-208ENST00000555557 EMC9Q9Y3B6 208 aa8.98□□□□□ -0.97
SRP54-208ENST00000555557 CACNA1CQ13936 2221 aa8.98□□□□□ -0.97
SRP54-208ENST00000555557 E9PI62 339 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 H3BSA7 217 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 ATP6V1G1O75348 118 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 TNFSF13O75888 250 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 PATE4P0C8F1 98 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 PTGER4P35408 488 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 OR3A2P47893 321 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 PMPCAQ10713 525 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 SF3B4Q15427 424 aaKnown RBP eCLIP8.97□□□□□ -0.972e-8■■□□□ 14.5
SRP54-208ENST00000555557 PCK2Q16822 640 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 OR2A2Q6IF42 318 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 TMPRSS11AQ6ZMR5 421 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 ZNF367Q7RTV3 350 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 BTLAQ7Z6A9 289 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 ATCAYQ86WG3 371 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 OR13F1Q8NGS4 319 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 FCGR1BQ92637 280 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 COG8Q96MW5 612 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 OPALINQ96PE5 141 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 FOXB1Q99853 325 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 ABHD6Q9BV23 337 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 TP63Q9H3D4 680 aaPredicted RBP8.97□□□□□ -0.97
SRP54-208ENST00000555557 NELFAQ9H3P2 528 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 TMEM38BQ9NVV0 291 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 SLCO1C1Q9NYB5 712 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 PTTG2Q9NZH5 202 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 GNG8Q9UK08 70 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 IKZF2Q9UKS7 526 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 POLR1DQ9Y2S0 133 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 GRIP1Q9Y3R0 1128 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 LHFPL6Q9Y693 200 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 A0A096LPE4 126 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 A0A1W2PPZ6 126 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 ZNF587BE7ETH6 402 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 RER1O15258 196 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 IL2RAP01589 272 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 TMIGD3P0DMS9 266 aaPredicted RBP8.97□□□□□ -0.97
SRP54-208ENST00000555557 OR8G3PP0DMU2 310 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 GLI4P10075 376 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 MSR1P21757 451 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 NR4A1P22736 598 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 PSMB10P40306 273 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 ARF1P84077 181 aaKnown RBP8.97□□□□□ -0.97
SRP54-208ENST00000555557 ENDOGQ14249 297 aaKnown RBP8.97□□□□□ -0.97
SRP54-208ENST00000555557 KCNMB1Q16558 191 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 TSTQ16762 297 aaKnown RBP8.97□□□□□ -0.97
SRP54-208ENST00000555557 CDONQ4KMG0 1287 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 TEX30Q5JUR7 227 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 ZNF684Q5T5D7 378 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 GPR107Q5VW38 600 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 FBXW9Q5XUX1 488 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 SLC18B1Q6NT16 456 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 KLHL24Q6TFL4 600 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 LRRN1Q6UXK5 716 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 TFAP2EQ6VUC0 442 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 CFAP77Q6ZQR2 320 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 FOXL2NBQ6ZUU3 175 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 OR52N1Q8NH53 320 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 ST7LQ8TDW4 575 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 DGCR14Q96DF8 476 aaKnown RBP8.97□□□□□ -0.97
SRP54-208ENST00000555557 STARD4Q96DR4 205 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 MAP6Q96JE9 813 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 NAA50Q9GZZ1 169 aaKnown RBP8.97□□□□□ -0.97
SRP54-208ENST00000555557 ACOXLQ9NUZ1 547 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 BABAM2Q9NXR7 383 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 MRM2Q9UI43 246 aaKnown RBP8.97□□□□□ -0.97
SRP54-208ENST00000555557 SIRT4Q9Y6E7 314 aaPredicted RBP8.97□□□□□ -0.97
SRP54-208ENST00000555557 TMEM14AQ9Y6G1 99 aa8.97□□□□□ -0.97
SRP54-208ENST00000555557 COL6A6A6NMZ7 2263 aa8.96□□□□□ -0.97
SRP54-208ENST00000555557 OR6C65A6NJZ3 312 aa8.96□□□□□ -0.97
SRP54-208ENST00000555557 RPL36A-HNRNPH2H7BZ11 118 aa8.96□□□□□ -0.97
SRP54-208ENST00000555557 TMCC2O75069 709 aa8.96□□□□□ -0.97
SRP54-208ENST00000555557 RPP14O95059 124 aaKnown RBP8.96□□□□□ -0.97
SRP54-208ENST00000555557 MT-ND5P03915 603 aa8.96□□□□□ -0.97
SRP54-208ENST00000555557 TIMP3P35625 211 aa8.96□□□□□ -0.97
SRP54-208ENST00000555557 MRPS34P82930 218 aaKnown RBP8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms