RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 IGHV3-74A0A0B4J1X5 117 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 HAS3O00219 553 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 MAGEB3O15480 346 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 PRKAB2O43741 272 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 DPM1O60762 260 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 CLDN9O95484 217 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 C1orf105O95561 183 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 RAB3DO95716 219 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 EIF4EP06730 217 aaKnown RBP0.78□□□□□ -2.28
SRP54-207ENST00000555535 PABPC4LP0CB38 370 aaKnown RBP0.78□□□□□ -2.28
SRP54-207ENST00000555535 ATP1B2P14415 290 aaPredicted RBP0.78□□□□□ -2.28
SRP54-207ENST00000555535 ETS2P15036 469 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 ZNF250P15622 560 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 DTYMKP23919 212 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 HNRNPH3P31942 346 aaKnown RBP0.78□□□□□ -2.28
SRP54-207ENST00000555535 FDFT1P37268 417 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 OPRK1P41145 380 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 GRIA1P42261 906 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 ACAA2P42765 397 aaKnown RBP0.78□□□□□ -2.28
SRP54-207ENST00000555535 TPMTP51580 245 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 RND2P52198 227 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 UGT2B15P54855 530 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 CDKN2DP55273 166 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 KRTAP12-1P59990 96 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 SEC61GP60059 68 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 ARG2P78540 354 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 FLI1Q01543 452 aaPredicted RBP0.78□□□□□ -2.28
SRP54-207ENST00000555535 TGM3Q08188 693 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 PPIL2Q13356 520 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 ZNF266Q14584 549 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 CLINT1Q14677 625 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 TGFBIQ15582 683 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 ATAD3BQ5T9A4 648 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 ANKRD26P1Q6NSI1 321 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 TMEM205Q6UW68 189 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 C12orf54Q6X4T0 127 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 Q6ZPB1 254 aaPredicted RBP0.78□□□□□ -2.28
SRP54-207ENST00000555535 HDDC2Q7Z4H3 204 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 WDFY1Q8IWB7 410 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 METTL13Q8N6R0 699 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 GMCL1P1Q8NEA9 526 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 OR4K5Q8NGD3 323 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 OR4S2Q8NH73 311 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 ZNF502Q8TBZ5 544 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 PHOSPHO2Q8TCD6 241 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 SLC7A13Q8TCU3 470 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 ABHD3Q8WU67 409 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 RLN3Q8WXF3 142 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 STMN2Q93045 179 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 FLYWCH2Q96CP2 140 aaKnown RBP0.78□□□□□ -2.28
SRP54-207ENST00000555535 ZNF488Q96MN9 340 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 SERPINB12Q96P63 405 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 NPY6RQ99463 290 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 TIMM17AQ99595 171 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 MFFQ9GZY8 342 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 ISYNA1Q9NPH2 558 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 FAM49BQ9NUQ9 324 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 N6AMT1Q9Y5N5 214 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 SVILO95425 2214 aa0.78□□□□□ -2.28
SRP54-207ENST00000555535 TRAV19A0A0A6YYK7 116 aa0.77□□□□□ -2.29
SRP54-207ENST00000555535 A0A0B4J2A0 478 aa0.77□□□□□ -2.29
SRP54-207ENST00000555535 ARHGEF35A5YM69 484 aa0.77□□□□□ -2.29
SRP54-207ENST00000555535 PCP4L1A6NKN8 68 aa0.77□□□□□ -2.29
SRP54-207ENST00000555535 DYNC1I1O14576 645 aa0.77□□□□□ -2.29
SRP54-207ENST00000555535 APCSP02743 223 aa0.77□□□□□ -2.29
SRP54-207ENST00000555535 C2P06681 752 aa0.77□□□□□ -2.29
SRP54-207ENST00000555535 CRYGBP07316 175 aa0.77□□□□□ -2.29
SRP54-207ENST00000555535 CD37P11049 281 aa0.77□□□□□ -2.29
SRP54-207ENST00000555535 DBTP11182 482 aaKnown RBP0.77□□□□□ -2.29
SRP54-207ENST00000555535 CASP14P31944 242 aa0.77□□□□□ -2.29
SRP54-207ENST00000555535 ZNF138P52744 262 aa0.77□□□□□ -2.29
SRP54-207ENST00000555535 FBXW4P57775 412 aa0.77□□□□□ -2.29
SRP54-207ENST00000555535 UBE2NP61088 152 aaKnown RBP0.77□□□□□ -2.29
SRP54-207ENST00000555535 UBE2HP62256 183 aa0.77□□□□□ -2.29
SRP54-207ENST00000555535 CDH17Q12864 832 aa0.77□□□□□ -2.29
SRP54-207ENST00000555535 GK3PQ14409 553 aa0.77□□□□□ -2.29
SRP54-207ENST00000555535 ARHGAP19Q14CB8 494 aa0.77□□□□□ -2.29
SRP54-207ENST00000555535 RBMY1FQ15415 496 aaKnown RBP0.77□□□□□ -2.29
SRP54-207ENST00000555535 DGUOKQ16854 277 aa0.77□□□□□ -2.29
SRP54-207ENST00000555535 ORMDL2Q53FV1 153 aa0.77□□□□□ -2.29
SRP54-207ENST00000555535 ANKRD22Q5VYY1 191 aa0.77□□□□□ -2.29
SRP54-207ENST00000555535 SMARCD3Q6STE5 483 aa0.77□□□□□ -2.29
SRP54-207ENST00000555535 TEX43Q6ZNM6 134 aa0.77□□□□□ -2.29
SRP54-207ENST00000555535 NIPA1Q7RTP0 329 aa0.77□□□□□ -2.29
SRP54-207ENST00000555535 SNX20Q7Z614 316 aa0.77□□□□□ -2.29
SRP54-207ENST00000555535 PSTKQ8IV42 348 aaKnown RBP0.77□□□□□ -2.29
SRP54-207ENST00000555535 GPATCH11Q8N954 259 aa0.77□□□□□ -2.29
SRP54-207ENST00000555535 C1orf64Q8NEQ6 169 aa0.77□□□□□ -2.29
SRP54-207ENST00000555535 OR4F6Q8NGB9 312 aa0.77□□□□□ -2.29
SRP54-207ENST00000555535 OR8J1Q8NGP2 316 aa0.77□□□□□ -2.29
SRP54-207ENST00000555535 OR1S2Q8NGQ3 325 aa0.77□□□□□ -2.29
SRP54-207ENST00000555535 OR13G1Q8NGZ3 307 aa0.77□□□□□ -2.29
SRP54-207ENST00000555535 LINC01560Q8TB33 94 aa0.77□□□□□ -2.29
SRP54-207ENST00000555535 CIRBP-AS1Q8TBR5 109 aa0.77□□□□□ -2.29
SRP54-207ENST00000555535 PIFOQ8TCI5 191 aa0.77□□□□□ -2.29
SRP54-207ENST00000555535 ZNF681Q96N22 645 aa0.77□□□□□ -2.29
SRP54-207ENST00000555535 CCT7Q99832 543 aa0.77□□□□□ -2.29
SRP54-207ENST00000555535 ROPN1BQ9BZX4 212 aaPredicted RBP0.77□□□□□ -2.29
SRP54-207ENST00000555535 ANKRD19PQ9H560 264 aa0.77□□□□□ -2.29
SRP54-207ENST00000555535 DHX35Q9H5Z1 703 aaKnown RBP0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms