RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 LRRC17Q8N6Y2 441 aa8.74□□□□□ -1.01
PSEN1-213ENST00000555386 OR4F15Q8NGB8 312 aa8.74□□□□□ -1.01
PSEN1-213ENST00000555386 MFSD8Q8NHS3 518 aa8.74□□□□□ -1.01
PSEN1-213ENST00000555386 HTRA1Q92743 480 aa8.74□□□□□ -1.01
PSEN1-213ENST00000555386 MARVELD3Q96A59 401 aa8.74□□□□□ -1.01
PSEN1-213ENST00000555386 GMPPAQ96IJ6 420 aaPredicted RBP8.74□□□□□ -1.01
PSEN1-213ENST00000555386 TMEM43Q9BTV4 400 aa8.74□□□□□ -1.01
PSEN1-213ENST00000555386 KATNB1Q9BVA0 655 aa8.74□□□□□ -1.01
PSEN1-213ENST00000555386 SFXN3Q9BWM7 321 aa8.74□□□□□ -1.01
PSEN1-213ENST00000555386 SRRQ9GZT4 340 aa8.74□□□□□ -1.01
PSEN1-213ENST00000555386 KCNN2Q9H2S1 579 aa8.74□□□□□ -1.01
PSEN1-213ENST00000555386 KLHL9Q9P2J3 617 aa8.74□□□□□ -1.01
PSEN1-213ENST00000555386 PROCRQ9UNN8 238 aa8.74□□□□□ -1.01
PSEN1-213ENST00000555386 CENPEQ02224 2701 aa8.73□□□□□ -1.01
PSEN1-213ENST00000555386 NBPF19A0A087WUL8 3843 aa8.73□□□□□ -1.01
PSEN1-213ENST00000555386 FTCDNL1E5RQL4 147 aa8.73□□□□□ -1.01
PSEN1-213ENST00000555386 PRR23D1E9PI22 279 aaPredicted RBP8.73□□□□□ -1.01
PSEN1-213ENST00000555386 OR2T1O43869 369 aa8.73□□□□□ -1.01
PSEN1-213ENST00000555386 EIF1BO60739 113 aaKnown RBP8.73□□□□□ -1.01
PSEN1-213ENST00000555386 SS18L1O75177 396 aaPredicted RBP8.73□□□□□ -1.01
PSEN1-213ENST00000555386 APOL3O95236 402 aa8.73□□□□□ -1.01
PSEN1-213ENST00000555386 IFNGP01579 166 aa8.73□□□□□ -1.01
PSEN1-213ENST00000555386 BGLAPP02818 100 aa8.73□□□□□ -1.01
PSEN1-213ENST00000555386 HIST1H2ABP04908 130 aa8.73□□□□□ -1.01
PSEN1-213ENST00000555386 YES1P07947 543 aa8.73□□□□□ -1.01
PSEN1-213ENST00000555386 PRR23D2P0DMB1 279 aaPredicted RBP8.73□□□□□ -1.01
PSEN1-213ENST00000555386 SAGP10523 405 aaPredicted RBP8.73□□□□□ -1.01
PSEN1-213ENST00000555386 ZNF3P17036 446 aa8.73□□□□□ -1.01
PSEN1-213ENST00000555386 AHCYP23526 432 aa8.73□□□□□ -1.01
PSEN1-213ENST00000555386 SLC6A6P31641 620 aa8.73□□□□□ -1.01
PSEN1-213ENST00000555386 ACTC1P68032 377 aa8.73□□□□□ -1.01
PSEN1-213ENST00000555386 ACTA1P68133 377 aa8.73□□□□□ -1.01
PSEN1-213ENST00000555386 SCN1BQ07699 218 aa8.73□□□□□ -1.01
PSEN1-213ENST00000555386 CBX3Q13185 183 aa8.73□□□□□ -1.01
PSEN1-213ENST00000555386 GALEQ14376 348 aa8.73□□□□□ -1.01
PSEN1-213ENST00000555386 EEF1A1P5Q5VTE0 462 aa8.73□□□□□ -1.01
PSEN1-213ENST00000555386 PLBD1Q6P4A8 553 aa8.73□□□□□ -1.01
PSEN1-213ENST00000555386 MZT2AQ6P582 158 aa8.73□□□□□ -1.01
PSEN1-213ENST00000555386 CCBE1Q6UXH8 406 aaPredicted RBP8.73□□□□□ -1.01
PSEN1-213ENST00000555386 GDPD3Q7L5L3 318 aa8.73□□□□□ -1.01
PSEN1-213ENST00000555386 HIST3H2AQ7L7L0 130 aa8.73□□□□□ -1.01
PSEN1-213ENST00000555386 LAX1Q8IWV1 398 aa8.73□□□□□ -1.01
PSEN1-213ENST00000555386 OR8H2Q8N162 312 aa8.73□□□□□ -1.01
PSEN1-213ENST00000555386 ZNF610Q8N9Z0 462 aa8.73□□□□□ -1.01
PSEN1-213ENST00000555386 BBS1Q8NFJ9 593 aa8.73□□□□□ -1.01
PSEN1-213ENST00000555386 SPRYD4Q8WW59 207 aaPredicted RBP8.73□□□□□ -1.01
PSEN1-213ENST00000555386 ACOT12Q8WYK0 555 aa8.73□□□□□ -1.01
PSEN1-213ENST00000555386 HIST1H2ACQ93077 130 aa8.73□□□□□ -1.01
PSEN1-213ENST00000555386 TMEM203Q969S6 136 aa8.73□□□□□ -1.01
PSEN1-213ENST00000555386 STARD4Q96DR4 205 aa8.73□□□□□ -1.01
PSEN1-213ENST00000555386 SGTBQ96EQ0 304 aa8.73□□□□□ -1.01
PSEN1-213ENST00000555386 ZFP3Q96NJ6 502 aa8.73□□□□□ -1.01
PSEN1-213ENST00000555386 IFT27Q9BW83 186 aa8.73□□□□□ -1.01
PSEN1-213ENST00000555386 CHST11Q9NPF2 352 aa8.73□□□□□ -1.01
PSEN1-213ENST00000555386 MEPEQ9NQ76 525 aaPredicted RBP8.73□□□□□ -1.01
PSEN1-213ENST00000555386 TRIM36Q9NQ86 728 aa8.73□□□□□ -1.01
PSEN1-213ENST00000555386 NANSQ9NR45 359 aa8.73□□□□□ -1.01
PSEN1-213ENST00000555386 C20orf141Q9NUB4 165 aa8.73□□□□□ -1.01
PSEN1-213ENST00000555386 BABAM2Q9NXR7 383 aa8.73□□□□□ -1.01
PSEN1-213ENST00000555386 ZNF629Q9UEG4 869 aaPredicted RBP8.73□□□□□ -1.01
PSEN1-213ENST00000555386 ADAM30Q9UKF2 790 aa8.73□□□□□ -1.01
PSEN1-213ENST00000555386 PAIP2BQ9ULR5 123 aaKnown RBP8.73□□□□□ -1.01
PSEN1-213ENST00000555386 NOSIPQ9Y314 301 aaKnown RBP8.73□□□□□ -1.01
PSEN1-213ENST00000555386 A0A1W2PQL4 384 aaPredicted RBP8.72□□□□□ -1.01
PSEN1-213ENST00000555386 FABP12A6NFH5 140 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 AQP7P3A6NL99 342 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 C12orf71A8MTZ7 269 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 BLOC1S5-TXNDC5H3BN57 136 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 C19orf84I3L1E1 186 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 GABRPO00591 440 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 CASKO14936 926 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 RGS9O75916 674 aaPredicted RBP8.72□□□□□ -1.01
PSEN1-213ENST00000555386 OR6A2O95222 327 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 SLC2A10O95528 541 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 IGF2P01344 180 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 MT-ND5P03915 603 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 CELP19835 753 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 SLC2A5P22732 501 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 EDNRAP25101 427 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 MTNR1BP49286 362 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 EIF2B2P49770 351 aaKnown RBP8.72□□□□□ -1.01
PSEN1-213ENST00000555386 MXD1Q05195 221 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 ASAH1Q13510 395 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 RIN1Q13671 783 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 ZNF79Q15937 498 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 ZNF74Q16587 644 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 SLC25A35Q3KQZ1 300 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 ABLIM2Q6H8Q1 611 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 ALKBH2Q6NS38 261 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 C5orf46Q6UWT4 87 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 H1FNTQ75WM6 255 aaPredicted RBP8.72□□□□□ -1.01
PSEN1-213ENST00000555386 SHFQ7M4L6 423 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 MAMDC2Q7Z304 686 aaPredicted RBP8.72□□□□□ -1.01
PSEN1-213ENST00000555386 AKAP14Q86UN6 197 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 ZNF100Q8IYN0 542 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 UBE2J2Q8N2K1 259 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 SLC37A3Q8NCC5 494 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 OR9K2Q8NGE7 335 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 OR51G2Q8NGK0 314 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 OR13C2Q8NGS9 318 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms