RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 TFAP2CQ92754 450 aa12.46□□□□□ -0.41
CHD8-208ENST00000555301 FBXO17Q96EF6 278 aa12.46□□□□□ -0.41
CHD8-208ENST00000555301 TEAD3Q99594 435 aa12.46□□□□□ -0.41
CHD8-208ENST00000555301 CRNNQ9UBG3 495 aaPredicted RBP12.46□□□□□ -0.41
CHD8-208ENST00000555301 TIMM10BQ9Y5J6 103 aa12.46□□□□□ -0.41
CHD8-208ENST00000555301 HSPE1-MOB4S4R3N1 261 aa12.46□□□□□ -0.41
CHD8-208ENST00000555301 ZNF503-AS2A6NEH8 195 aa12.45□□□□□ -0.42
CHD8-208ENST00000555301 TVP23AA6NH52 213 aa12.45□□□□□ -0.42
CHD8-208ENST00000555301 MMP7P09237 267 aaPredicted RBP12.45□□□□□ -0.42
CHD8-208ENST00000555301 PATE4P0C8F1 98 aa12.45□□□□□ -0.42
CHD8-208ENST00000555301 ZNF32P17041 273 aa12.45□□□□□ -0.42
CHD8-208ENST00000555301 ZNF83P51522 516 aa12.45□□□□□ -0.42
CHD8-208ENST00000555301 NR1H2P55055 460 aa12.45□□□□□ -0.42
CHD8-208ENST00000555301 CDH11P55287 796 aa12.45□□□□□ -0.42
CHD8-208ENST00000555301 IL5RAQ01344 420 aa12.45□□□□□ -0.42
CHD8-208ENST00000555301 PLP2Q04941 152 aa12.45□□□□□ -0.42
CHD8-208ENST00000555301 TMED1Q13445 227 aa12.45□□□□□ -0.42
CHD8-208ENST00000555301 OCLNQ16625 522 aa12.45□□□□□ -0.42
CHD8-208ENST00000555301 MEP1BQ16820 701 aa12.45□□□□□ -0.42
CHD8-208ENST00000555301 BEX5Q5H9J7 111 aa12.45□□□□□ -0.42
CHD8-208ENST00000555301 TEX30Q5JUR7 227 aa12.45□□□□□ -0.42
CHD8-208ENST00000555301 SEZ6L2Q6UXD5 910 aa12.45□□□□□ -0.42
CHD8-208ENST00000555301 TMEM108Q6UXF1 575 aa12.45□□□□□ -0.42
CHD8-208ENST00000555301 BCDIN3DQ7Z5W3 292 aaKnown RBP12.45□□□□□ -0.42
CHD8-208ENST00000555301 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.45□□□□□ -0.42
CHD8-208ENST00000555301 ALDH16A1Q8IZ83 802 aa12.45□□□□□ -0.42
CHD8-208ENST00000555301 ZNF511Q8NB15 262 aa12.45□□□□□ -0.42
CHD8-208ENST00000555301 RHOXF1Q8NHV9 184 aa12.45□□□□□ -0.42
CHD8-208ENST00000555301 FGFBP3Q8TAT2 258 aa12.45□□□□□ -0.42
CHD8-208ENST00000555301 UBE2FQ969M7 185 aa12.45□□□□□ -0.42
CHD8-208ENST00000555301 ZMYND19Q96E35 227 aaPredicted RBP12.45□□□□□ -0.42
CHD8-208ENST00000555301 Q96MT0 163 aa12.45□□□□□ -0.42
CHD8-208ENST00000555301 INTS14Q96SY0 518 aa12.45□□□□□ -0.42
CHD8-208ENST00000555301 C1orf198Q9H425 327 aa12.45□□□□□ -0.42
CHD8-208ENST00000555301 ESRP2Q9H6T0 727 aaKnown RBP12.45□□□□□ -0.42
CHD8-208ENST00000555301 MARCH7Q9H992 704 aa12.45□□□□□ -0.42
CHD8-208ENST00000555301 RASSF1Q9NS23 344 aa12.45□□□□□ -0.42
CHD8-208ENST00000555301 MRPL22Q9NWU5 206 aaKnown RBP12.45□□□□□ -0.42
CHD8-208ENST00000555301 ASH2LQ9UBL3 628 aa12.45□□□□□ -0.42
CHD8-208ENST00000555301 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.45□□□□□ -0.42
CHD8-208ENST00000555301 COMMD3-BMI1R4GMX3 469 aa12.45□□□□□ -0.42
CHD8-208ENST00000555301 LRRK2Q5S007 2527 aa12.44□□□□□ -0.42
CHD8-208ENST00000555301 IQCMA0A1B0GVH7 501 aa12.44□□□□□ -0.42
CHD8-208ENST00000555301 M0R1B8 84 aa12.44□□□□□ -0.42
CHD8-208ENST00000555301 CLIC3O95833 236 aa12.44□□□□□ -0.42
CHD8-208ENST00000555301 PTHP01270 115 aa12.44□□□□□ -0.42
CHD8-208ENST00000555301 IGLV1-44P01699 117 aa12.44□□□□□ -0.42
CHD8-208ENST00000555301 GABRB1P18505 474 aa12.44□□□□□ -0.42
CHD8-208ENST00000555301 PTAFRP25105 342 aa12.44□□□□□ -0.42
CHD8-208ENST00000555301 HTR1FP30939 366 aa12.44□□□□□ -0.42
CHD8-208ENST00000555301 ENTPD1P49961 510 aa12.44□□□□□ -0.42
CHD8-208ENST00000555301 SHFQ7M4L6 423 aa12.44□□□□□ -0.42
CHD8-208ENST00000555301 ERI1Q8IV48 349 aaKnown RBP12.44□□□□□ -0.42
CHD8-208ENST00000555301 TIGD4Q8IY51 512 aa12.44□□□□□ -0.42
CHD8-208ENST00000555301 C8orf59Q8N0T1 100 aaPredicted RBP12.44□□□□□ -0.42
CHD8-208ENST00000555301 GJC3Q8NFK1 279 aa12.44□□□□□ -0.42
CHD8-208ENST00000555301 IL17RDQ8NFM7 739 aa12.44□□□□□ -0.42
CHD8-208ENST00000555301 OR2AJ1Q8NGZ0 328 aa12.44□□□□□ -0.42
CHD8-208ENST00000555301 ZNF582Q96NG8 517 aaPredicted RBP12.44□□□□□ -0.42
CHD8-208ENST00000555301 C1QTNF6Q9BXI9 259 aa12.44□□□□□ -0.42
CHD8-208ENST00000555301 OR2H1Q9GZK4 316 aa12.44□□□□□ -0.42
CHD8-208ENST00000555301 WDR76Q9H967 626 aa12.44□□□□□ -0.42
CHD8-208ENST00000555301 NOX3Q9HBY0 568 aa12.44□□□□□ -0.42
CHD8-208ENST00000555301 CLN6Q9NWW5 311 aa12.44□□□□□ -0.42
CHD8-208ENST00000555301 HAO2Q9NYQ3 351 aa12.44□□□□□ -0.42
CHD8-208ENST00000555301 NPAP1Q9NZP6 1156 aa12.44□□□□□ -0.42
CHD8-208ENST00000555301 DNAJC27Q9NZQ0 273 aa12.44□□□□□ -0.42
CHD8-208ENST00000555301 WARS2Q9UGM6 360 aaKnown RBP12.44□□□□□ -0.42
CHD8-208ENST00000555301 CYB5R1Q9UHQ9 305 aa12.44□□□□□ -0.42
CHD8-208ENST00000555301 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.43□□□□□ -0.42
CHD8-208ENST00000555301 CCDC182A6NF36 153 aa12.43□□□□□ -0.42
CHD8-208ENST00000555301 ZNF593O00488 134 aaPredicted RBP12.43□□□□□ -0.42
CHD8-208ENST00000555301 ENTPD6O75354 484 aa12.43□□□□□ -0.42
CHD8-208ENST00000555301 SERPINA5P05154 406 aa12.43□□□□□ -0.42
CHD8-208ENST00000555301 SPARCP09486 303 aa12.43□□□□□ -0.42
CHD8-208ENST00000555301 ZNF14P17017 642 aaPredicted RBP12.43□□□□□ -0.42
CHD8-208ENST00000555301 COL8A1P27658 744 aa12.43□□□□□ -0.42
CHD8-208ENST00000555301 IDH3GP51553 393 aaPredicted RBP12.43□□□□□ -0.42
CHD8-208ENST00000555301 PSG4Q00888 419 aa12.43□□□□□ -0.42
CHD8-208ENST00000555301 POU4F2Q12837 409 aa12.43□□□□□ -0.42
CHD8-208ENST00000555301 GGTLC2Q14390 218 aa12.43□□□□□ -0.42
CHD8-208ENST00000555301 MAD2L1BPQ15013 274 aaPredicted RBP12.43□□□□□ -0.42
CHD8-208ENST00000555301 PCK2Q16822 640 aa12.43□□□□□ -0.42
CHD8-208ENST00000555301 PABPC1L2AQ5JQF8 200 aa12.43□□□□□ -0.42
CHD8-208ENST00000555301 C6orf52Q5T4I8 152 aa12.43□□□□□ -0.42
CHD8-208ENST00000555301 OTPQ5XKR4 325 aa12.43□□□□□ -0.42
CHD8-208ENST00000555301 SLC18B1Q6NT16 456 aa12.43□□□□□ -0.42
CHD8-208ENST00000555301 LYPD4Q6UWN0 246 aa12.43□□□□□ -0.42
CHD8-208ENST00000555301 USP51Q70EK9 711 aa12.43□□□□□ -0.42
CHD8-208ENST00000555301 OR6N2Q8NGY6 317 aa12.43□□□□□ -0.42
CHD8-208ENST00000555301 ZNF75AQ96N20 296 aa12.43□□□□□ -0.42
CHD8-208ENST00000555301 LHFPL6Q9Y693 200 aa12.43□□□□□ -0.42
CHD8-208ENST00000555301 FREM1Q5H8C1 2179 aa12.43□□□□□ -0.42
CHD8-208ENST00000555301 ALPK2Q86TB3 2170 aa12.43□□□□□ -0.42
CHD8-208ENST00000555301 FASNP49327 2511 aaKnown RBP12.43□□□□□ -0.42
CHD8-208ENST00000555301 GCN1Q92616 2671 aaKnown RBP12.43□□□□□ -0.42
CHD8-208ENST00000555301 COL12A1Q99715 3063 aa12.42□□□□□ -0.42
CHD8-208ENST00000555301 IGHV1-18A0A0C4DH31 117 aa12.42□□□□□ -0.42
CHD8-208ENST00000555301 A6NNC1 897 aa12.42□□□□□ -0.42
CHD8-208ENST00000555301 DEFB108AA8MXU0 73 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms