RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 ZNF321PQ8N8H1 164 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 SCAIQ8N9R8 606 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 CYB561A3Q8NBI2 242 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 IL17RDQ8NFM7 739 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 OR6S1Q8NH40 331 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 OR4K13Q8NH42 304 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 RPS4Y2Q8TD47 263 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 PTP4A1Q93096 173 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 GAL3ST4Q96RP7 486 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 SOSTQ9BQB4 213 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 HCAR1Q9BXC0 346 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 TBL1XR1Q9BZK7 514 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 NMNAT2Q9BZQ4 307 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 SLITRK2Q9H156 845 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 NXF5Q9H1B4 397 aaKnown RBP9.92□□□□□ -0.82
SHMT2-216ENST00000554975 TIGARQ9NQ88 270 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 RYDENQ9NUL5 291 aaKnown RBP9.92□□□□□ -0.82
SHMT2-216ENST00000554975 RBFOX1Q9NWB1 397 aaKnown RBP9.92□□□□□ -0.82
SHMT2-216ENST00000554975 EXTL2Q9UBQ6 330 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 PPIEQ9UNP9 301 aaKnown RBP9.92□□□□□ -0.82
SHMT2-216ENST00000554975 LIPGQ9Y5X9 500 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 TRAV36DV7A0A075B6V5 113 aa9.91□□□□□ -0.82
SHMT2-216ENST00000554975 PINLYPA6NC86 204 aa9.91□□□□□ -0.82
SHMT2-216ENST00000554975 HRKO00198 91 aa9.91□□□□□ -0.82
SHMT2-216ENST00000554975 ORC5O43913 435 aa9.91□□□□□ -0.82
SHMT2-216ENST00000554975 HPGDSO60760 199 aa9.91□□□□□ -0.82
SHMT2-216ENST00000554975 CCNKO75909 580 aa9.91□□□□□ -0.82
SHMT2-216ENST00000554975 OR2J2O76002 312 aa9.91□□□□□ -0.82
SHMT2-216ENST00000554975 CXCR1P25024 350 aa9.91□□□□□ -0.82
SHMT2-216ENST00000554975 DDOSTP39656 456 aa9.91□□□□□ -0.82
SHMT2-216ENST00000554975 SCAND1P57086 179 aa9.91□□□□□ -0.82
SHMT2-216ENST00000554975 SLC3A1Q07837 685 aa9.91□□□□□ -0.82
SHMT2-216ENST00000554975 FHL1Q13642 323 aa9.91□□□□□ -0.82
SHMT2-216ENST00000554975 BAK1Q16611 211 aa9.91□□□□□ -0.82
SHMT2-216ENST00000554975 HSD17B12Q53GQ0 312 aa9.91□□□□□ -0.82
SHMT2-216ENST00000554975 YIF1BQ5BJH7 314 aa9.91□□□□□ -0.82
SHMT2-216ENST00000554975 ZMAT1Q5H9K5 638 aa9.91□□□□□ -0.82
SHMT2-216ENST00000554975 ZNF362Q5T0B9 420 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-216ENST00000554975 IDNKQ5T6J7 187 aa9.91□□□□□ -0.82
SHMT2-216ENST00000554975 IL20RBQ6UXL0 311 aa9.91□□□□□ -0.82
SHMT2-216ENST00000554975 MDGA2Q7Z553 956 aa9.91□□□□□ -0.82
SHMT2-216ENST00000554975 CEACAM19Q7Z692 300 aa9.91□□□□□ -0.82
SHMT2-216ENST00000554975 ZFP62Q8NB50 900 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-216ENST00000554975 OR5L2Q8NGL0 311 aa9.91□□□□□ -0.82
SHMT2-216ENST00000554975 OR6K6Q8NGW6 343 aa9.91□□□□□ -0.82
SHMT2-216ENST00000554975 OR4C3Q8NH37 302 aa9.91□□□□□ -0.82
SHMT2-216ENST00000554975 ABHD4Q8TB40 342 aa9.91□□□□□ -0.82
SHMT2-216ENST00000554975 ZNF721Q8TF20 911 aa9.91□□□□□ -0.82
SHMT2-216ENST00000554975 C15orf40Q8WUR7 153 aa9.91□□□□□ -0.82
SHMT2-216ENST00000554975 TMEM234Q8WY98 164 aa9.91□□□□□ -0.82
SHMT2-216ENST00000554975 ADIPOR1Q96A54 375 aa9.91□□□□□ -0.82
SHMT2-216ENST00000554975 RFT1Q96AA3 541 aa9.91□□□□□ -0.82
SHMT2-216ENST00000554975 ZMYND19Q96E35 227 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-216ENST00000554975 PGLYRP3Q96LB9 341 aa9.91□□□□□ -0.82
SHMT2-216ENST00000554975 OR2B2Q9GZK3 357 aa9.91□□□□□ -0.82
SHMT2-216ENST00000554975 WWTR1Q9GZV5 400 aa9.91□□□□□ -0.82
SHMT2-216ENST00000554975 PPP1R3EQ9H7J1 279 aa9.91□□□□□ -0.82
SHMT2-216ENST00000554975 ISG20L2Q9H9L3 353 aaKnown RBP9.91□□□□□ -0.82
SHMT2-216ENST00000554975 CYSLTR2Q9NS75 346 aa9.91□□□□□ -0.82
SHMT2-216ENST00000554975 HPF1Q9NWY4 346 aa9.91□□□□□ -0.82
SHMT2-216ENST00000554975 COPZ2Q9P299 210 aa9.91□□□□□ -0.82
SHMT2-216ENST00000554975 IGKV1D-42A0A075B6H8 117 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 HMX3A6NHT5 357 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 OR6C70A6NIJ9 312 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 CENPXA8MT69 81 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 CDK2AP1O14519 115 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 XKRYO14609 159 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 LYRM1O43325 122 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 NDUFB5O43674 189 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 TSPAN2O60636 221 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 ADAM11O75078 769 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 ICOSLGO75144 302 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 TPPPO94811 219 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 AHSA1O95433 338 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 TFP02787 698 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 UCHL1P09936 223 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 ASAH2BP0C7U1 165 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 SPNP16150 400 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 NPR2P20594 1047 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 EDNRAP25101 427 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 APEX1P27695 318 aaKnown RBP9.9□□□□□ -0.82
SHMT2-216ENST00000554975 POLR2HP52434 150 aaKnown RBP9.9□□□□□ -0.82
SHMT2-216ENST00000554975 RNF4P78317 190 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 SIRPAP78324 504 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 MRPS10P82664 201 aaKnown RBP9.9□□□□□ -0.82
SHMT2-216ENST00000554975 CD226Q15762 336 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 SGCBQ16585 318 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 NDUFA5Q16718 116 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 ACSM3Q53FZ2 586 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 FAM205BPQ63HN1 556 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 ZNF585AQ6P3V2 769 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 LEG1Q6P5S2 330 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 LRRN1Q6UXK5 716 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 CELF2-AS1Q8N7Q2 184 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 RELL2Q8NC24 303 aaPredicted RBP9.9□□□□□ -0.82
SHMT2-216ENST00000554975 NPEPL1Q8NDH3 523 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 TRMT10AQ8TBZ6 339 aaKnown RBP9.9□□□□□ -0.82
SHMT2-216ENST00000554975 STK35Q8TDR2 534 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 KLHL15Q96M94 604 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 RASL10BQ96S79 203 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms