RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	TMED10	P49755	219 aa	Known RBP	4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	CCNG1	P51959	295 aa		4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	LGALS3BP	Q08380	585 aa		4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	ILF2	Q12905	390 aa	Known RBP	4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	RCAN2	Q14206	197 aa		4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	GUSBP1	Q15486	140 aa		4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	ACKR1	Q16570	336 aa		4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	GTDC1	Q4AE62	458 aa		4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	GGTA1P	Q4G0N0	100 aa		4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	IQCC	Q4KMZ1	466 aa		4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	AARD	Q4LEZ3	155 aa		4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	UNC50	Q53HI1	259 aa		4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	TTC19	Q6DKK2	380 aa	Predicted RBP	4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	SCIMP	Q6UWF3	145 aa		4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	APOOL	Q6UXV4	268 aa		4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	ZNF497	Q6ZNH5	498 aa		4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	IFNE	Q86WN2	208 aa		4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	GRAMD2A	Q8IUY3	354 aa		4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	UBQLNL	Q8IYU4	475 aa		4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	CNEP1R1	Q8N9A8	125 aa		4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	FADS6	Q8N9I5	356 aa		4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	THAP8	Q8NA92	274 aa		4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	MAPK1IP1L	Q8NDC0	245 aa		4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	KBTBD8	Q8NFY9	601 aa		4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	OR2M3	Q8NG83	312 aa		4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	OR1J1	Q8NGS3	322 aa		4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	FNDC9	Q8TBE3	224 aa		4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	SELENOM	Q8WWX9	145 aa		4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	BCL2L2	Q92843	193 aa	Predicted RBP	4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	EXOSC8	Q96B26	276 aa	Known RBP	4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	C11orf24	Q96F05	449 aa	Predicted RBP	4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	PIK3IP1	Q96FE7	263 aa		4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	PGM2	Q96G03	612 aa		4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	PRAC1	Q96KF2	57 aa		4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	C16orf45	Q96MC5	204 aa	Predicted RBP	4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	COL21A1	Q96P44	957 aa		4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	BTBD9	Q96Q07	612 aa		4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	ACPT	Q9BZG2	426 aa		4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	DSN1	Q9H410	356 aa		4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	FOLH1B	Q9HBA9	442 aa		4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	DNAJC4	Q9NNZ3	241 aa		4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	A4GALT	Q9NPC4	353 aa		4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	GSN-AS1	Q9NRJ2	163 aa		4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	MED11	Q9P086	117 aa		4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	ACTR3B	Q9P1U1	418 aa		4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	MRPS28	Q9Y2Q9	187 aa	Known RBP	4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	ZNF337	Q9Y3M9	751 aa		4.37	□□□□□ -1.71
PSMC6-208	ENST00000554956	IGLV9-49	A0A0B4J1Y8	123 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	GOLGA6L10	A6NI86	522 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	SLC22A20	A6NK97	555 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	TRIM49D1	C9J1S8	452 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	UBFD1	O14562	309 aa	Known RBP	4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	CASK	O14936	926 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	ACOX3	O15254	700 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	SCO2	O43819	266 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	GMFG	O60234	142 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	FADS1	O60427	444 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	SMPD2	O60906	423 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	FCGR3B	O75015	233 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	TRMU	O75648	421 aa	Known RBP	4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	RBP1	P09455	135 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	IRF2	P14316	349 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	CRYGS	P22914	178 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	GCA	P28676	217 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	DEK	P35659	375 aa	Known RBP	4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	CD79B	P40259	229 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	FRK	P42685	505 aa	Predicted RBP	4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	SERPINB8	P50452	374 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	FOXA1	P55317	472 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	RPP38	P78345	283 aa	Known RBP	4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	IFT88	Q13099	833 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	STX5	Q13190	355 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	NAB1	Q13506	487 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	TMEM187	Q14656	261 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	TMEM44	Q2T9K0	475 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	UGT3A2	Q3SY77	523 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	ENPP6	Q6UWR7	440 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	PAGE2	Q7Z2X7	111 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	NRARP	Q7Z6K4	114 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	PIGW	Q7Z7B1	504 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	GALNT10	Q86SR1	603 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	MARCH3	Q86UD3	253 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	VANGL1	Q8TAA9	524 aa	Predicted RBP	4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	ZNF675	Q8TD23	568 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	C16orf78	Q8WTQ4	265 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	DCAKD	Q8WVC6	231 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	C5orf30	Q96GV9	206 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	ZFP3	Q96NJ6	502 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	FAM111A	Q96PZ2	611 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	KCNA7	Q96RP8	456 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	PINK1	Q9BXM7	581 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	EBPL	Q9BY08	206 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	ELOVL6	Q9H5J4	265 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	SRD5A3	Q9H8P0	318 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	RNF122	Q9H9V4	155 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	SLCO1C1	Q9NYB5	712 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	AHSP	Q9NZD4	102 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	TMEM216	Q9P0N5	145 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	VPS29	Q9UBQ0	182 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	CACNG5	Q9UF02	275 aa		4.36	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 42 ms