RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 TMCO5AQ8N6Q1 288 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 SIGLECL1Q8N7X8 197 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 ZNF614Q8N883 585 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 EIF1ADQ8N9N8 165 aaKnown RBP4.12□□□□□ -1.75
ATXN3-228ENST00000554592 OR1K1Q8NGR3 316 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 C22orf15Q8WYQ4 148 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 BCL2L2Q92843 193 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-228ENST00000554592 SLC25A28Q96A46 364 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 TMEM45BQ96B21 275 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 AURKBQ96GD4 344 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-228ENST00000554592 METTL2AQ96IZ6 378 aaKnown RBP4.12□□□□□ -1.75
ATXN3-228ENST00000554592 NUDT16L1Q9BRJ7 211 aaKnown RBP4.12□□□□□ -1.75
ATXN3-228ENST00000554592 ERP44Q9BS26 406 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 CENPOQ9BU64 300 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 SF3B5Q9BWJ5 86 aaKnown RBP4.12□□□□□ -1.75
ATXN3-228ENST00000554592 ZNF416Q9BWM5 594 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 MMP27Q9H306 513 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 ZNF665Q9H7R5 613 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 CYSLTR2Q9NS75 346 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 SIRT3Q9NTG7 399 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-228ENST00000554592 TMEM181Q9P2C4 612 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 CHRNA9Q9UGM1 479 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 STK38LQ9Y2H1 464 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 CMAHPQ9Y471 501 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 MMP24Q9Y5R2 645 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 FLVCR1Q9Y5Y0 555 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 TRRAPQ9Y4A5 3859 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 TENM1Q9UKZ4 2725 aa4.12□□□□□ -1.75
ATXN3-228ENST00000554592 IGHV2OR16-5A0A0B4J2B6 119 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 A8MT66 165 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 A8MZ25 164 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 ZNF587BE7ETH6 402 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 CCDC188H7C350 402 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 M0QZ24 198 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 M0R233 179 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 NR5A2O00482 541 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 TIMM23O14925 209 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 TBX19O60806 448 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 LGI1O95970 557 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 IGKV3-15P01624 115 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 HMGN2P05204 90 aaKnown RBP4.11□□□□□ -1.75
ATXN3-228ENST00000554592 KRT16P08779 473 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 TCN1P20061 433 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-228ENST00000554592 TAC1P20366 129 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 IMPDH1P20839 514 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 ARR3P36575 388 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 PSMB10P40306 273 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 FRKP42685 505 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-228ENST00000554592 MAGEA12P43365 314 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 ASMTP46597 345 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 HTR6P50406 440 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 PKNOX1P55347 436 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 P2RX3P56373 397 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 IRF3Q14653 427 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 LASP1Q14847 261 aaKnown RBP4.11□□□□□ -1.75
ATXN3-228ENST00000554592 UAP1Q16222 522 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-228ENST00000554592 ZSCAN26Q16670 478 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 IMPG1Q17R60 797 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 C2orf68Q2NKX9 166 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 MMEL1Q495T6 779 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 ZNF678Q5SXM1 525 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 DCST2Q5T1A1 773 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 DCAF12L2Q5VW00 463 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 FAM219BQ5XKK7 198 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 AWAT2Q6E213 333 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 ANKRD26P1Q6NSI1 321 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 C8orf74Q6P047 294 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 C17orf107Q6ZR85 190 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 EIF3MQ7L2H7 374 aaKnown RBP4.11□□□□□ -1.75
ATXN3-228ENST00000554592 GRINAQ7Z429 371 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 HAPLN4Q86UW8 402 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 CCDC36Q8IYA8 594 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 CDK20Q8IZL9 346 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 NRACQ8N912 160 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 ZIC4Q8N9L1 334 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 ZNF563Q8TA94 476 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 TMEM163Q8TC26 289 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 DCAKDQ8WVC6 231 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 CDS1Q92903 461 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 YIPF5Q969M3 257 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 CIDECQ96AQ7 238 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-228ENST00000554592 PPCDCQ96CD2 204 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 RAB39BQ96DA2 213 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 OTUB1Q96FW1 271 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-228ENST00000554592 EGLN2Q96KS0 407 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 CCT8L2Q96SF2 557 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 SDF2Q99470 211 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 CCDC106Q9BWC9 280 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 RSPO3Q9BXY4 272 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-228ENST00000554592 NMUR2Q9GZQ4 415 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 TPK1Q9H3S4 243 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 ZNF385DQ9H6B1 395 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 REEP4Q9H6H4 257 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 RANGRFQ9HD47 186 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-228ENST00000554592 CTPS2Q9NRF8 586 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 ZNF275Q9NSD4 429 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-228ENST00000554592 ZCCHC3Q9NUD5 404 aaKnown RBP4.11□□□□□ -1.75
ATXN3-228ENST00000554592 OPN4Q9UHM6 478 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 FAF1Q9UNN5 650 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-228ENST00000554592 POLR3HQ9Y535 204 aaPredicted RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms