RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, human

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R3A-204	ENST00000554574	OR4Q3	Q8NH05	313 aa		4.21	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	OR8K3	Q8NH51	312 aa		4.21	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	PFN4	Q8NHR9	129 aa		4.21	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	FANK1	Q8TC84	345 aa		4.21	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	GRHL3	Q8TE85	626 aa		4.21	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	METTL21A	Q8WXB1	218 aa		4.21	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	TMEM80	Q96HE8	168 aa		4.21	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	PLEKHA8	Q96JA3	519 aa		4.21	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	ZNF582	Q96NG8	517 aa	Predicted RBP	4.21	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	LRFN5	Q96NI6	719 aa		4.21	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	GAL3ST4	Q96RP7	486 aa		4.21	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	DCUN1D5	Q9BTE7	237 aa		4.21	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	SLC19A3	Q9BZV2	496 aa		4.21	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	RACGAP1	Q9H0H5	632 aa		4.21	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	OR52D1	Q9H346	318 aa		4.21	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	KCNK15	Q9H427	330 aa		4.21	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	FN3K	Q9H479	309 aa		4.21	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	WDR54	Q9H977	334 aa		4.21	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	HHATL	Q9HCP6	504 aa		4.21	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	OCIAD1	Q9NX40	245 aa		4.21	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	OR6C3	Q9NZP0	311 aa		4.21	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	RPS6KB2	Q9UBS0	482 aa		4.21	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	DIMT1	Q9UNQ2	313 aa	Known RBP	4.21	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	CACNA1C	Q13936	2221 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	TMEM8B	A6NDV4	472 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	GAGE12J	A6NER3	117 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	OR6C70	A6NIJ9	312 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	EFCAB9	A8MZ26	197 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	KPNA4	O00629	521 aa	Predicted RBP	4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	TIMM23	O14925	209 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	FLRT2	O43155	660 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	PRKN	O60260	465 aa	Predicted RBP	4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	ICOSLG	O75144	302 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	ALOX12B	O75342	701 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	REM1	O75628	298 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	LDOC1	O95751	146 aa	Predicted RBP	4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	PTH	P01270	115 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	HEXB	P07686	556 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	ADRA2A	P08913	450 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	SAG	P10523	405 aa	Predicted RBP	4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	PNMT	P11086	282 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	CD36	P16671	472 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	CCKBR	P32239	447 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	SLC6A8	P48029	635 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	SLC9A3	P48764	834 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	NR0B1	P51843	470 aa	Known RBP	4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	EMP2	P54851	167 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	ELL	P55199	621 aa	Predicted RBP	4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	PLCXD2	Q0VAA5	305 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	DYNC1I2	Q13409	638 aa	Known RBP	4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	CD226	Q15762	336 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	EFNB3	Q15768	340 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	LPAL2	Q16609	132 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	NDUFAF6	Q330K2	333 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574		Q5PR19	223 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	AADACL4	Q5VUY2	407 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	NXNL2	Q5VZ03	156 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	SLC18B1	Q6NT16	456 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	SMARCD3	Q6STE5	483 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	CBLN3	Q6UW01	205 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	TMEM205	Q6UW68	189 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	APOOL	Q6UXV4	268 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	HSDL2	Q6YN16	418 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	RTL4	Q6ZR62	310 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	SHISA6	Q6ZSJ9	500 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	SHF	Q7M4L6	423 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	NUP54	Q7Z3B4	507 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	OAF	Q86UD1	273 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	CCDC190	Q86UF4	302 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	FOXRED2	Q8IWF2	684 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	BEST3	Q8N1M1	668 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	CADM2	Q8N3J6	435 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	NFAM1	Q8NET5	270 aa	Predicted RBP	4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	PROKR2	Q8NFJ6	384 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	NUBPL	Q8TB37	319 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	OMA1	Q96E52	524 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	ARSG	Q96EG1	525 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	SAMD8	Q96LT4	415 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	DACH2	Q96NX9	599 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	CITED2	Q99967	270 aa	Predicted RBP	4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	TMEM43	Q9BTV4	400 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	MND1	Q9BWT6	205 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	LAT2	Q9GZY6	243 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	ARRDC1-AS1	Q9H2J1	176 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	C12orf10	Q9HB07	376 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	APMAP	Q9HDC9	416 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	FGF20	Q9NP95	211 aa	Predicted RBP	4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	FBXO8	Q9NRD0	319 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	CMC2	Q9NRP2	79 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	NXT1	Q9UKK6	140 aa	Known RBP	4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	ICAM5	Q9UMF0	924 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	BAIAP2	Q9UQB8	552 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	ERGIC3	Q9Y282	383 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	LSM2	Q9Y333	95 aa	Known RBP	4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	POMT1	Q9Y6A1	747 aa		4.2	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	TRAV34	A0A0B4J273	112 aa		4.19	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	TMEM129	A0AVI4	362 aa		4.19	□□□□□ -1.74
PPP4R3A-204	ENST00000554574		M0R3G1	203 aa		4.19	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	EIF4E2	O60573	245 aa	Known RBP	4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms