RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 WDFY3Q8IZQ1 3526 aa14.08□□□□□ -0.15
ARHGEF40-203ENST00000554514 LOC100289279A0A1B0GTE1 492 aa14.08□□□□□ -0.15
ARHGEF40-203ENST00000554514 RPS10-NUDT3A0A1W2PQS6 291 aa14.08□□□□□ -0.15
ARHGEF40-203ENST00000554514 TEX46H3BTG2 121 aa14.08□□□□□ -0.15
ARHGEF40-203ENST00000554514 ZNF354AO60765 605 aaPredicted RBP14.08□□□□□ -0.15
ARHGEF40-203ENST00000554514 MT-ATP6P00846 226 aa14.08□□□□□ -0.15
ARHGEF40-203ENST00000554514 SEZ6L2Q6UXD5 910 aa14.08□□□□□ -0.15
ARHGEF40-203ENST00000554514 GRINAQ7Z429 371 aa14.08□□□□□ -0.15
ARHGEF40-203ENST00000554514 DCXRQ7Z4W1 244 aa14.08□□□□□ -0.15
ARHGEF40-203ENST00000554514 C15orf40Q8WUR7 153 aa14.08□□□□□ -0.15
ARHGEF40-203ENST00000554514 EMC6Q9BV81 110 aa14.08□□□□□ -0.15
ARHGEF40-203ENST00000554514 SLC17A2O00624 439 aa14.08□□□□□ -0.16
ARHGEF40-203ENST00000554514 DUX1O43812 170 aa14.08□□□□□ -0.16
ARHGEF40-203ENST00000554514 CSF1P09603 554 aa14.08□□□□□ -0.16
ARHGEF40-203ENST00000554514 ZNF823P16415 610 aa14.08□□□□□ -0.16
ARHGEF40-203ENST00000554514 POU3F2P20265 443 aaPredicted RBP14.08□□□□□ -0.16
ARHGEF40-203ENST00000554514 GLO1Q04760 184 aa14.08□□□□□ -0.16
ARHGEF40-203ENST00000554514 FAM198BQ6UWH4 519 aa14.08□□□□□ -0.16
ARHGEF40-203ENST00000554514 C17orf82Q86X59 251 aaPredicted RBP14.08□□□□□ -0.16
ARHGEF40-203ENST00000554514 PLXDC1Q8IUK5 500 aa14.08□□□□□ -0.16
ARHGEF40-203ENST00000554514 MUC20Q8N307 709 aaPredicted RBP14.08□□□□□ -0.16
ARHGEF40-203ENST00000554514 ZNF248Q8NDW4 579 aa14.08□□□□□ -0.16
ARHGEF40-203ENST00000554514 LRRC20Q8TCA0 184 aa14.08□□□□□ -0.16
ARHGEF40-203ENST00000554514 ASB17Q8WXJ9 295 aa14.08□□□□□ -0.16
ARHGEF40-203ENST00000554514 MTCH2Q9Y6C9 303 aa14.08□□□□□ -0.16
ARHGEF40-203ENST00000554514 LOC100509620A0A075B734 347 aa14.08□□□□□ -0.16
ARHGEF40-203ENST00000554514 IGKV1D-43A0A0B4J1Z2 117 aa14.08□□□□□ -0.16
ARHGEF40-203ENST00000554514 PIAS2O75928 621 aa14.08□□□□□ -0.16
ARHGEF40-203ENST00000554514 PDGFAP04085 211 aa14.08□□□□□ -0.16
ARHGEF40-203ENST00000554514 CD2P06729 351 aa14.08□□□□□ -0.16
ARHGEF40-203ENST00000554514 GLULP15104 373 aa14.08□□□□□ -0.16
ARHGEF40-203ENST00000554514 AP2S1P53680 142 aaPredicted RBP14.08□□□□□ -0.16
ARHGEF40-203ENST00000554514 PNLIPRP2P54317 469 aa14.08□□□□□ -0.16
ARHGEF40-203ENST00000554514 H2BFSP57053 126 aa14.08□□□□□ -0.16
ARHGEF40-203ENST00000554514 POU3F1Q03052 451 aaPredicted RBP14.08□□□□□ -0.16
ARHGEF40-203ENST00000554514 DCAF12L2Q5VW00 463 aa14.08□□□□□ -0.16
ARHGEF40-203ENST00000554514 B3GNTL1Q67FW5 361 aaPredicted RBP14.08□□□□□ -0.16
ARHGEF40-203ENST00000554514 ARSKQ6UWY0 536 aa14.08□□□□□ -0.16
ARHGEF40-203ENST00000554514 C5orf34Q96MH7 638 aa14.08□□□□□ -0.16
ARHGEF40-203ENST00000554514 B3GNT4Q9C0J1 378 aa14.08□□□□□ -0.16
ARHGEF40-203ENST00000554514 FARSAQ9Y285 508 aaKnown RBP14.08□□□□□ -0.16
ARHGEF40-203ENST00000554514 MRPS18BQ9Y676 258 aaKnown RBP14.08□□□□□ -0.16
ARHGEF40-203ENST00000554514 ASCC3Q8N3C0 2202 aaKnown RBP14.07□□□□□ -0.16
ARHGEF40-203ENST00000554514 A0A1B0GX78 115 aa14.07□□□□□ -0.16
ARHGEF40-203ENST00000554514 NPIPA5E9PKD4 350 aa14.07□□□□□ -0.16
ARHGEF40-203ENST00000554514 FADS1O60427 444 aa14.07□□□□□ -0.16
ARHGEF40-203ENST00000554514 DXOO77932 396 aaKnown RBP14.07□□□□□ -0.16
ARHGEF40-203ENST00000554514 GIPP09681 153 aaPredicted RBP14.07□□□□□ -0.16
ARHGEF40-203ENST00000554514 AKAIN1P0CW23 69 aa14.07□□□□□ -0.16
ARHGEF40-203ENST00000554514 LIPCP11150 499 aa14.07□□□□□ -0.16
ARHGEF40-203ENST00000554514 NFYAP23511 347 aaPredicted RBP14.07□□□□□ -0.16
ARHGEF40-203ENST00000554514 HTR2CP28335 458 aa14.07□□□□□ -0.16
ARHGEF40-203ENST00000554514 NXPH1P58417 271 aa14.07□□□□□ -0.16
ARHGEF40-203ENST00000554514 SPICQ8N5J4 248 aa14.07□□□□□ -0.16
ARHGEF40-203ENST00000554514 OR52N5Q8NH56 324 aa14.07□□□□□ -0.16
ARHGEF40-203ENST00000554514 ANGPTL6Q8NI99 470 aa14.07□□□□□ -0.16
ARHGEF40-203ENST00000554514 TMEM185BQ9H7F4 350 aa14.07□□□□□ -0.16
ARHGEF40-203ENST00000554514 SUSD2Q9UGT4 822 aa14.07□□□□□ -0.16
ARHGEF40-203ENST00000554514 NPIPA1Q9UND3 350 aa14.07□□□□□ -0.16
ARHGEF40-203ENST00000554514 A0A1W2PPL8 197 aa14.07□□□□□ -0.16
ARHGEF40-203ENST00000554514 A0A1W2PQD3 144 aa14.07□□□□□ -0.16
ARHGEF40-203ENST00000554514 P2RY10O00398 339 aa14.07□□□□□ -0.16
ARHGEF40-203ENST00000554514 SLC26A5P58743 744 aa14.07□□□□□ -0.16
ARHGEF40-203ENST00000554514 RNF4P78317 190 aa14.07□□□□□ -0.16
ARHGEF40-203ENST00000554514 GLT8D1Q68CQ7 371 aa14.07□□□□□ -0.16
ARHGEF40-203ENST00000554514 STEAP1BQ6NZ63 245 aa14.07□□□□□ -0.16
ARHGEF40-203ENST00000554514 TTC9Q92623 222 aa14.07□□□□□ -0.16
ARHGEF40-203ENST00000554514 MVB12AQ96EY5 273 aa14.07□□□□□ -0.16
ARHGEF40-203ENST00000554514 VSX1Q9NZR4 365 aaPredicted RBP14.07□□□□□ -0.16
ARHGEF40-203ENST00000554514 CNTRLQ7Z7A1 2325 aa14.07□□□□□ -0.16
ARHGEF40-203ENST00000554514 NUP210LQ5VU65 1888 aa14.06□□□□□ -0.16
ARHGEF40-203ENST00000554514 LOC107986453A0A1B0GWG9 222 aa14.06□□□□□ -0.16
ARHGEF40-203ENST00000554514 NPIPB7O75200 414 aa14.06□□□□□ -0.16
ARHGEF40-203ENST00000554514 CPN1P15169 458 aa14.06□□□□□ -0.16
ARHGEF40-203ENST00000554514 RAP2BP61225 183 aa14.06□□□□□ -0.16
ARHGEF40-203ENST00000554514 MOGAT2Q3SYC2 334 aa14.06□□□□□ -0.16
ARHGEF40-203ENST00000554514 SCGB2B2Q4G0G5 96 aa14.06□□□□□ -0.16
ARHGEF40-203ENST00000554514 TEX30Q5JUR7 227 aa14.06□□□□□ -0.16
ARHGEF40-203ENST00000554514 ALKAL2Q6UX46 152 aa14.06□□□□□ -0.16
ARHGEF40-203ENST00000554514 CATSPERDQ86XM0 798 aa14.06□□□□□ -0.16
ARHGEF40-203ENST00000554514 ACBD4Q8NC06 268 aa14.06□□□□□ -0.16
ARHGEF40-203ENST00000554514 MED30Q96HR3 178 aa14.06□□□□□ -0.16
ARHGEF40-203ENST00000554514 SLC41A2Q96JW4 573 aa14.06□□□□□ -0.16
ARHGEF40-203ENST00000554514 VPS13AQ96RL7 3174 aa14.06□□□□□ -0.16
ARHGEF40-203ENST00000554514 A0A1B0GTQ1 180 aa14.06□□□□□ -0.16
ARHGEF40-203ENST00000554514 PLSCR5A0PG75 271 aa14.06□□□□□ -0.16
ARHGEF40-203ENST00000554514 IL5P05113 134 aa14.06□□□□□ -0.16
ARHGEF40-203ENST00000554514 SRFP11831 508 aa14.06□□□□□ -0.16
ARHGEF40-203ENST00000554514 OGFOD3Q6PK18 319 aa14.06□□□□□ -0.16
ARHGEF40-203ENST00000554514 C3P1Q6ZMU1 363 aa14.06□□□□□ -0.16
ARHGEF40-203ENST00000554514 SLC36A1Q7Z2H8 476 aa14.06□□□□□ -0.16
ARHGEF40-203ENST00000554514 COQ8AQ8NI60 647 aa14.06□□□□□ -0.16
ARHGEF40-203ENST00000554514 FAM46BQ96A09 425 aa14.06□□□□□ -0.16
ARHGEF40-203ENST00000554514 RDH8Q9NYR8 311 aa14.06□□□□□ -0.16
ARHGEF40-203ENST00000554514 TMEM269A0A1B0GVZ9 245 aa14.05□□□□□ -0.16
ARHGEF40-203ENST00000554514 SNRPGP15A8MWD9 76 aa14.05□□□□□ -0.16
ARHGEF40-203ENST00000554514 TMEM127O75204 238 aa14.05□□□□□ -0.16
ARHGEF40-203ENST00000554514 BCKDHBP21953 392 aa14.05□□□□□ -0.16
ARHGEF40-203ENST00000554514 CLLU1Q5K131 121 aa14.05□□□□□ -0.16
ARHGEF40-203ENST00000554514 SIGIRRQ6IA17 410 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms