RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 SLC25A18Q9H1K4 315 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 COA4Q9NYJ1 87 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 KIF25Q9UIL4 384 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 KCNG2Q9UJ96 466 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 MAB21L2Q9Y586 359 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 OTOGLQ3ZCN5 2332 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 FAM74A7A6NL05 159 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 PLPP3O14495 311 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 DOK2O60496 412 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 RENP00797 406 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 CTLA4P16410 223 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 RAB14P61106 215 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 CDK5R1Q15078 307 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 SGCBQ16585 318 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 FAM74A3Q4VXF1 159 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 SLC43A2Q8N370 569 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 SPACA9Q96E40 222 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-212ENST00000554467 GPR171O14626 319 aa10.48□□□□□ -0.73
SHMT2-212ENST00000554467 EIF4EP06730 217 aaKnown RBP10.48□□□□□ -0.73
SHMT2-212ENST00000554467 SELENOPP49908 381 aa10.48□□□□□ -0.73
SHMT2-212ENST00000554467 ZNF41P51814 821 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-212ENST00000554467 INSM1Q01101 510 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-212ENST00000554467 BDH1Q02338 343 aa10.48□□□□□ -0.73
SHMT2-212ENST00000554467 ST3GAL2Q16842 350 aa10.48□□□□□ -0.73
SHMT2-212ENST00000554467 ZNF468Q5VIY5 522 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-212ENST00000554467 ZNF600Q6ZNG1 722 aa10.48□□□□□ -0.73
SHMT2-212ENST00000554467 TIPARPQ7Z3E1 657 aaKnown RBP10.48□□□□□ -0.73
SHMT2-212ENST00000554467 OR11G2Q8NGC1 345 aa10.48□□□□□ -0.73
SHMT2-212ENST00000554467 ELP5Q8TE02 316 aa10.48□□□□□ -0.73
SHMT2-212ENST00000554467 OIT3Q8WWZ8 545 aa10.48□□□□□ -0.73
SHMT2-212ENST00000554467 TMEM234Q8WY98 164 aa10.48□□□□□ -0.73
SHMT2-212ENST00000554467 C5orf34Q96MH7 638 aa10.48□□□□□ -0.73
SHMT2-212ENST00000554467 OR51J1Q9H342 316 aa10.48□□□□□ -0.73
SHMT2-212ENST00000554467 NOSIPQ9Y314 301 aaKnown RBP10.48□□□□□ -0.73
SHMT2-212ENST00000554467 WIF1Q9Y5W5 379 aa10.48□□□□□ -0.73
SHMT2-212ENST00000554467 SPTBN2O15020 2390 aa10.48□□□□□ -0.73
SHMT2-212ENST00000554467 IFNGR1P15260 489 aa10.48□□□□□ -0.73
SHMT2-212ENST00000554467 POU3F1Q03052 451 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-212ENST00000554467 FAM209BQ5JX69 171 aa10.48□□□□□ -0.73
SHMT2-212ENST00000554467 SLC22A8Q8TCC7 542 aa10.48□□□□□ -0.73
SHMT2-212ENST00000554467 GCDHQ92947 438 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-212ENST00000554467 GNRHR2Q96P88 292 aa10.48□□□□□ -0.73
SHMT2-212ENST00000554467 MRM2Q9UI43 246 aaKnown RBP10.48□□□□□ -0.73
SHMT2-212ENST00000554467 LAMP5Q9UJQ1 280 aa10.48□□□□□ -0.73
SHMT2-212ENST00000554467 ADAM30Q9UKF2 790 aa10.48□□□□□ -0.73
SHMT2-212ENST00000554467 GTF2A1LQ9UNN4 478 aa10.48□□□□□ -0.73
SHMT2-212ENST00000554467 PHF3Q92576 2039 aaKnown RBP10.48□□□□□ -0.73
SHMT2-212ENST00000554467 WNT11O96014 354 aa10.48□□□□□ -0.73
SHMT2-212ENST00000554467 TCN2P20062 427 aa10.48□□□□□ -0.73
SHMT2-212ENST00000554467 DNASE1P24855 282 aa10.48□□□□□ -0.73
SHMT2-212ENST00000554467 AVPR2P30518 371 aa10.48□□□□□ -0.73
SHMT2-212ENST00000554467 HAAOP46952 286 aa10.48□□□□□ -0.73
SHMT2-212ENST00000554467 SOX2P48431 317 aa10.48□□□□□ -0.73
SHMT2-212ENST00000554467 RPL27P61353 136 aaKnown RBP10.48□□□□□ -0.73
SHMT2-212ENST00000554467 ACTA2P62736 377 aa10.48□□□□□ -0.73
SHMT2-212ENST00000554467 ACTG2P63267 376 aa10.48□□□□□ -0.73
SHMT2-212ENST00000554467 SLC35D3Q5M8T2 416 aa10.48□□□□□ -0.73
SHMT2-212ENST00000554467 NUP54Q7Z3B4 507 aa10.48□□□□□ -0.73
SHMT2-212ENST00000554467 MDGA2Q7Z553 956 aa10.48□□□□□ -0.73
SHMT2-212ENST00000554467 ZNF433Q8N7K0 673 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-212ENST00000554467 SMIM19Q96E16 107 aa10.48□□□□□ -0.73
SHMT2-212ENST00000554467 AK6Q9Y3D8 172 aaKnown RBP10.48□□□□□ -0.73
SHMT2-212ENST00000554467 MEIKINA0A087WXM9 373 aa10.47□□□□□ -0.73
SHMT2-212ENST00000554467 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.47□□□□□ -0.73
SHMT2-212ENST00000554467 PRSS37A4D1T9 235 aa10.47□□□□□ -0.73
SHMT2-212ENST00000554467 FTCDNL1E5RQL4 147 aa10.47□□□□□ -0.73
SHMT2-212ENST00000554467 ZFPL1O95159 310 aa10.47□□□□□ -0.73
SHMT2-212ENST00000554467 ONECUT2O95948 504 aa10.47□□□□□ -0.73
SHMT2-212ENST00000554467 NMBP08949 121 aa10.47□□□□□ -0.73
SHMT2-212ENST00000554467 FBXO45P0C2W1 286 aa10.47□□□□□ -0.73
SHMT2-212ENST00000554467 CCL3P10147 92 aa10.47□□□□□ -0.73
SHMT2-212ENST00000554467 SNRPBP14678 240 aaKnown RBP10.47□□□□□ -0.73
SHMT2-212ENST00000554467 F8A1P23610 371 aa10.47□□□□□ -0.73
SHMT2-212ENST00000554467 RPS11P62280 158 aaKnown RBP eCLIP10.47□□□□□ -0.73
SHMT2-212ENST00000554467 TLE3Q04726 772 aa10.47□□□□□ -0.73
SHMT2-212ENST00000554467 TRA2AQ13595 282 aaKnown RBP eCLIP10.47□□□□□ -0.73
SHMT2-212ENST00000554467 LIPNQ5VXI9 398 aa10.47□□□□□ -0.73
SHMT2-212ENST00000554467 CD276Q5ZPR3 534 aa10.47□□□□□ -0.73
SHMT2-212ENST00000554467 B3GNTL1Q67FW5 361 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-212ENST00000554467 LRRN1Q6UXK5 716 aa10.47□□□□□ -0.73
SHMT2-212ENST00000554467 RAB11FIP2Q7L804 512 aa10.47□□□□□ -0.73
SHMT2-212ENST00000554467 WDSUB1Q8N9V3 476 aa10.47□□□□□ -0.73
SHMT2-212ENST00000554467 OR2Y1Q8NGV0 311 aa10.47□□□□□ -0.73
SHMT2-212ENST00000554467 ZNF671Q8TAW3 534 aa10.47□□□□□ -0.73
SHMT2-212ENST00000554467 POC1BQ8TC44 478 aa10.47□□□□□ -0.73
SHMT2-212ENST00000554467 PPP1R14AQ96A00 147 aa10.47□□□□□ -0.73
SHMT2-212ENST00000554467 THAP7Q9BT49 309 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-212ENST00000554467 WDR54Q9H977 334 aa10.47□□□□□ -0.73
SHMT2-212ENST00000554467 CACNG2Q9Y698 323 aa10.47□□□□□ -0.73
SHMT2-212ENST00000554467 LINC00587B1AMM8 73 aa10.47□□□□□ -0.73
SHMT2-212ENST00000554467 MS4A18H0YCH9 400 aa10.47□□□□□ -0.73
SHMT2-212ENST00000554467 DXOO77932 396 aaKnown RBP10.47□□□□□ -0.73
SHMT2-212ENST00000554467 TXNDC12O95881 172 aa10.47□□□□□ -0.73
SHMT2-212ENST00000554467 MT-ATP6P00846 226 aa10.47□□□□□ -0.73
SHMT2-212ENST00000554467 SPARCP09486 303 aa10.47□□□□□ -0.73
SHMT2-212ENST00000554467 ACP1P24666 158 aa10.47□□□□□ -0.73
SHMT2-212ENST00000554467 FOLR3P41439 243 aa10.47□□□□□ -0.73
SHMT2-212ENST00000554467 SLC25A1P53007 311 aa10.47□□□□□ -0.73
SHMT2-212ENST00000554467 ISXQ2M1V0 245 aa10.47□□□□□ -0.73
SHMT2-212ENST00000554467 MS4A18Q3C1V0 323 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms