RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 MRPS34P82930 218 aaKnown RBP11.3□□□□□ -0.6
SHMT2-211ENST00000554310 FMODQ06828 376 aa11.3□□□□□ -0.6
SHMT2-211ENST00000554310 TNK1Q13470 666 aa11.3□□□□□ -0.6
SHMT2-211ENST00000554310 MST1LQ2TV78 715 aa11.3□□□□□ -0.6
SHMT2-211ENST00000554310 ZBED5Q49AG3 693 aa11.3□□□□□ -0.6
SHMT2-211ENST00000554310 KDM4DQ6B0I6 523 aa11.3□□□□□ -0.6
SHMT2-211ENST00000554310 TMEM53Q6P2H8 277 aa11.3□□□□□ -0.6
SHMT2-211ENST00000554310 FAHD1Q6P587 224 aa11.3□□□□□ -0.6
SHMT2-211ENST00000554310 VHLLQ6RSH7 139 aa11.3□□□□□ -0.6
SHMT2-211ENST00000554310 CLEC9AQ6UXN8 241 aa11.3□□□□□ -0.6
SHMT2-211ENST00000554310 SLC16A14Q7RTX9 510 aa11.3□□□□□ -0.6
SHMT2-211ENST00000554310 THAP5Q7Z6K1 395 aa11.3□□□□□ -0.6
SHMT2-211ENST00000554310 SATL1Q86VE3 508 aa11.3□□□□□ -0.6
SHMT2-211ENST00000554310 IGFN1Q86VF2 1251 aa11.3□□□□□ -0.6
SHMT2-211ENST00000554310 MEX3DQ86XN8 651 aaKnown RBP11.3□□□□□ -0.6
SHMT2-211ENST00000554310 C8orf59Q8N0T1 100 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-211ENST00000554310 ZNF519Q8TB69 540 aa11.3□□□□□ -0.6
SHMT2-211ENST00000554310 MS4A3Q96HJ5 214 aa11.3□□□□□ -0.6
SHMT2-211ENST00000554310 FAM46AQ96IP4 442 aaKnown RBP11.3□□□□□ -0.6
SHMT2-211ENST00000554310 TSPAN32Q96QS1 320 aa11.3□□□□□ -0.6
SHMT2-211ENST00000554310 TNFRSF13CQ96RJ3 184 aa11.3□□□□□ -0.6
SHMT2-211ENST00000554310 SMR3AQ99954 134 aa11.3□□□□□ -0.6
SHMT2-211ENST00000554310 SH3GL3Q99963 347 aa11.3□□□□□ -0.6
SHMT2-211ENST00000554310 PLK3Q9H4B4 646 aa11.3□□□□□ -0.6
SHMT2-211ENST00000554310 SPEF1Q9Y4P9 236 aa11.3□□□□□ -0.6
SHMT2-211ENST00000554310 UGT2A1Q9Y4X1 527 aa11.3□□□□□ -0.6
SHMT2-211ENST00000554310 FKBP7Q9Y680 259 aa11.3□□□□□ -0.6
SHMT2-211ENST00000554310 U3KQV3 271 aa11.3□□□□□ -0.6
SHMT2-211ENST00000554310 LOC100130705A0A1B0GUX0 176 aa11.29□□□□□ -0.6
SHMT2-211ENST00000554310 DIRAS1O95057 198 aa11.29□□□□□ -0.6
SHMT2-211ENST00000554310 NDUFB2O95178 105 aa11.29□□□□□ -0.6
SHMT2-211ENST00000554310 CLIC3O95833 236 aa11.29□□□□□ -0.6
SHMT2-211ENST00000554310 SERPINA5P05154 406 aa11.29□□□□□ -0.6
SHMT2-211ENST00000554310 CD14P08571 375 aa11.29□□□□□ -0.6
SHMT2-211ENST00000554310 CSF3P09919 207 aa11.29□□□□□ -0.6
SHMT2-211ENST00000554310 ZNF35P13682 527 aa11.29□□□□□ -0.6
SHMT2-211ENST00000554310 PRKACGP22612 351 aa11.29□□□□□ -0.6
SHMT2-211ENST00000554310 NR4A1P22736 598 aa11.29□□□□□ -0.6
SHMT2-211ENST00000554310 IGFBP5P24593 272 aa11.29□□□□□ -0.6
SHMT2-211ENST00000554310 THBS4P35443 961 aa11.29□□□□□ -0.6
SHMT2-211ENST00000554310 OMPP47874 163 aa11.29□□□□□ -0.6
SHMT2-211ENST00000554310 PPOXP50336 477 aa11.29□□□□□ -0.6
SHMT2-211ENST00000554310 DSCR9P59020 149 aa11.29□□□□□ -0.6
SHMT2-211ENST00000554310 RPS23P62266 143 aaKnown RBP11.29□□□□□ -0.6
SHMT2-211ENST00000554310 GALK2Q01415 458 aa11.29□□□□□ -0.6
SHMT2-211ENST00000554310 SPIBQ01892 262 aa11.29□□□□□ -0.6
SHMT2-211ENST00000554310 PPP1R8Q12972 351 aaKnown RBP11.29□□□□□ -0.6
SHMT2-211ENST00000554310 RAB39AQ14964 217 aa11.29□□□□□ -0.6
SHMT2-211ENST00000554310 RBM48Q5RL73 367 aaKnown RBP11.29□□□□□ -0.6
SHMT2-211ENST00000554310 THEM4Q5T1C6 240 aa11.29□□□□□ -0.6
SHMT2-211ENST00000554310 ZNF691Q5VV52 312 aa11.29□□□□□ -0.6
SHMT2-211ENST00000554310 CLEC2AQ6UVW9 174 aa11.29□□□□□ -0.6
SHMT2-211ENST00000554310 ARIH2OSQ8N7S6 290 aa11.29□□□□□ -0.6
SHMT2-211ENST00000554310 DGCR14Q96DF8 476 aaKnown RBP11.29□□□□□ -0.6
SHMT2-211ENST00000554310 RBP7Q96R05 134 aa11.29□□□□□ -0.6
SHMT2-211ENST00000554310 GPX7Q96SL4 187 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-211ENST00000554310 FUZQ9BT04 418 aa11.29□□□□□ -0.6
SHMT2-211ENST00000554310 SIAEQ9HAT2 523 aa11.29□□□□□ -0.6
SHMT2-211ENST00000554310 PDP1Q9P0J1 537 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-211ENST00000554310 GRHPRQ9UBQ7 328 aa11.29□□□□□ -0.6
SHMT2-211ENST00000554310 ZNF346Q9UL40 294 aaKnown RBP11.29□□□□□ -0.6
SHMT2-211ENST00000554310 HSPE1-MOB4S4R3N1 261 aa11.29□□□□□ -0.6
SHMT2-211ENST00000554310 FN1P02751 2386 aaKnown RBP11.29□□□□□ -0.6
SHMT2-211ENST00000554310 CR1P17927 2039 aa11.28□□□□□ -0.6
SHMT2-211ENST00000554310 SH3PXD2BA1X283 911 aa11.28□□□□□ -0.6
SHMT2-211ENST00000554310 RNF223E7ERA6 249 aa11.28□□□□□ -0.6
SHMT2-211ENST00000554310 XKRYO14609 159 aa11.28□□□□□ -0.6
SHMT2-211ENST00000554310 AHCYL1O43865 530 aa11.28□□□□□ -0.6
SHMT2-211ENST00000554310 GADD45GO95257 159 aa11.28□□□□□ -0.6
SHMT2-211ENST00000554310 PTHP01270 115 aa11.28□□□□□ -0.6
SHMT2-211ENST00000554310 PATE4P0C8F1 98 aa11.28□□□□□ -0.6
SHMT2-211ENST00000554310 RRM2P31350 389 aa11.28□□□□□ -0.6
SHMT2-211ENST00000554310 GLRXP35754 106 aa11.28□□□□□ -0.6
SHMT2-211ENST00000554310 DAPP51397 102 aa11.28□□□□□ -0.6
SHMT2-211ENST00000554310 ERVK-25P63136 954 aa11.28□□□□□ -0.6
SHMT2-211ENST00000554310 SEC23BQ15437 767 aa11.28□□□□□ -0.6
SHMT2-211ENST00000554310 SLC25A47Q6Q0C1 308 aa11.28□□□□□ -0.6
SHMT2-211ENST00000554310 FAM122BQ7Z309 247 aa11.28□□□□□ -0.6
SHMT2-211ENST00000554310 ZNF584Q8IVC4 421 aa11.28□□□□□ -0.6
SHMT2-211ENST00000554310 SETD9Q8NE22 299 aa11.28□□□□□ -0.6
SHMT2-211ENST00000554310 SLC30A7Q8NEW0 376 aa11.28□□□□□ -0.6
SHMT2-211ENST00000554310 OR4C15Q8NGM1 316 aa11.28□□□□□ -0.6
SHMT2-211ENST00000554310 OR52J3Q8NH60 311 aa11.28□□□□□ -0.6
SHMT2-211ENST00000554310 FGFBP3Q8TAT2 258 aa11.28□□□□□ -0.6
SHMT2-211ENST00000554310 FBLIM1Q8WUP2 373 aa11.28□□□□□ -0.6
SHMT2-211ENST00000554310 NSMAFQ92636 917 aa11.28□□□□□ -0.6
SHMT2-211ENST00000554310 HTRA1Q92743 480 aa11.28□□□□□ -0.6
SHMT2-211ENST00000554310 NABP1Q96AH0 204 aa11.28□□□□□ -0.6
SHMT2-211ENST00000554310 RHNO1Q9BSD3 238 aa11.28□□□□□ -0.6
SHMT2-211ENST00000554310 REG4Q9BYZ8 158 aa11.28□□□□□ -0.6
SHMT2-211ENST00000554310 YIPF3Q9GZM5 350 aa11.28□□□□□ -0.6
SHMT2-211ENST00000554310 RBM38Q9H0Z9 239 aaKnown RBP11.28□□□□□ -0.6
SHMT2-211ENST00000554310 KCNN2Q9H2S1 579 aa11.28□□□□□ -0.6
SHMT2-211ENST00000554310 RNF121Q9H920 327 aa11.28□□□□□ -0.6
SHMT2-211ENST00000554310 SIGLEC7Q9Y286 467 aa11.28□□□□□ -0.6
SHMT2-211ENST00000554310 ADAM18Q9Y3Q7 739 aa11.28□□□□□ -0.6
SHMT2-211ENST00000554310 CMAHPQ9Y471 501 aa11.28□□□□□ -0.6
SHMT2-211ENST00000554310 LYVE1Q9Y5Y7 322 aa11.28□□□□□ -0.6
SHMT2-211ENST00000554310 SONP18583 2426 aaKnown RBP11.28□□□□□ -0.6
SHMT2-211ENST00000554310 ABCA1O95477 2261 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms