RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 HYAL4Q2M3T9 481 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 ZNF311Q5JNZ3 666 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 EXOSC6Q5RKV6 272 aaKnown RBP8.64□□□□□ -1.03
SIX4-202ENST00000554079 PIP5KL1Q5T9C9 394 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 RPL7L1Q6DKI1 246 aaKnown RBP8.64□□□□□ -1.03
SIX4-202ENST00000554079 TIPARPQ7Z3E1 657 aaKnown RBP8.64□□□□□ -1.03
SIX4-202ENST00000554079 GALNTL5Q7Z4T8 443 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 SLC35E3Q7Z769 313 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 SLC25A42Q86VD7 318 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 OR9A1PQ8NGU1 263 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 OR14K1Q8NGZ2 314 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 OR8S1Q8NH09 359 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 CD300LFQ8TDQ1 290 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 DIO2Q92813 273 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 JSRP1Q96MG2 331 aaPredicted RBP8.64□□□□□ -1.03
SIX4-202ENST00000554079 GPR174Q9BXC1 333 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 NMES1Q9C002 83 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 RRAGCQ9HB90 399 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 TAF9BQ9HBM6 251 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 SGK2Q9HBY8 427 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 Q9N2J8 555 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 GPR173Q9NS66 373 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 PADI1Q9ULC6 663 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 ICKQ9UPZ9 632 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 FARSAQ9Y285 508 aaKnown RBP8.64□□□□□ -1.03
SIX4-202ENST00000554079 TRBV5-4A0A0C4DH59 114 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 CYB5BO43169 146 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 F11P03951 625 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 TK1P04183 234 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 ADRA2CP18825 462 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 NDUFV2P19404 249 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 FCARP24071 287 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 ACRV1P26436 265 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 CD82P27701 267 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 YBEYP58557 167 aaPredicted RBP8.64□□□□□ -1.03
SIX4-202ENST00000554079 RAP1BP61224 184 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 RPS13P62277 151 aaKnown RBP8.64□□□□□ -1.03
SIX4-202ENST00000554079 SELENOTP62341 195 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 LMAN2Q12907 356 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 MIDNQ504T8 468 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 C1orf194Q5T5A4 169 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 KIRREL2Q6UWL6 708 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 BTNL3Q6UXE8 466 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 FAM151BQ6UXP7 276 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 WDR88Q6ZMY6 472 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 OLIG3Q7RTU3 272 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 COMMD6Q7Z4G1 85 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 TMEM229BQ8NBD8 167 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 OR4S1Q8NGB4 309 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 RPS4Y2Q8TD47 263 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 MRGPRDQ8TDS7 321 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 GPX8Q8TED1 209 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 HLA-CQ95604 372 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 C5orf34Q96MH7 638 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 ALKBH3Q96Q83 286 aaPredicted RBP8.64□□□□□ -1.03
SIX4-202ENST00000554079 SEPT5Q99719 369 aaPredicted RBP8.64□□□□□ -1.03
SIX4-202ENST00000554079 NKX3-1Q99801 234 aaPredicted RBP8.64□□□□□ -1.03
SIX4-202ENST00000554079 PDCD1LG2Q9BQ51 273 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 GPR87Q9BY21 358 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 TTTY10Q9BZA0 68 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 ATG10Q9H0Y0 220 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 SLC35B3Q9H1N7 401 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 SEPSECSQ9HD40 501 aaKnown RBP8.64□□□□□ -1.03
SIX4-202ENST00000554079 LANCL2Q9NS86 450 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 HAO2Q9NYQ3 351 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 TAAR2Q9P1P5 351 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 OR52A1Q9UKL2 312 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 YBX2Q9Y2T7 364 aaKnown RBP8.64□□□□□ -1.03
SIX4-202ENST00000554079 COLEC10Q9Y6Z7 277 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 EML5Q05BV3 1969 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 PLXNA2O75051 1894 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 MDC1Q14676 2089 aaKnown RBP8.64□□□□□ -1.03
SIX4-202ENST00000554079 VWA8A3KMH1 1905 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 M0QYG6 137 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 CDC42EP2O14613 210 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 CTAG2O75638 210 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 DDNO94850 711 aaPredicted RBP8.63□□□□□ -1.03
SIX4-202ENST00000554079 TSPAN15O95858 294 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 PPBPP02775 128 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 ZNF888P0CJ79 500 aaPredicted RBP8.63□□□□□ -1.03
SIX4-202ENST00000554079 EDNRAP25101 427 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 CHATP28329 748 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 FXYD6P3P58550 94 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 TAS2R41P59536 307 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 LEMD1Q68G75 181 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 FBXL22Q6P050 247 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 RPL22L1Q6P5R6 122 aaKnown RBP8.63□□□□□ -1.03
SIX4-202ENST00000554079 ANKRD16Q6P6B7 361 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 PRSS54Q6PEW0 395 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 SLC35G3Q8N808 338 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 BHLHE23Q8NDY6 225 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 OIT3Q8WWZ8 545 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 TAAR8Q969N4 342 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 CST11Q9H112 138 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 PCED1AQ9H1Q7 454 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 OR5AC2Q9NZP5 309 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 ZNF223Q9UK11 482 aaPredicted RBP8.63□□□□□ -1.03
SIX4-202ENST00000554079 MRPS33Q9Y291 106 aaKnown RBP8.63□□□□□ -1.03
SIX4-202ENST00000554079 TRBV2A0A0J9YWF9 115 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 NKX6-3A6NJ46 265 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms