RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 HOXD1Q9GZZ0 328 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 RAB1BQ9H0U4 201 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 FKRPQ9H9S5 495 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 FANCFQ9NPI8 374 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 TIGARQ9NQ88 270 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 RRAGDQ9NQL2 400 aaPredicted RBP2.63□□□□□ -1.99
SLIRP-202ENST00000553981 NMRK1Q9NWW6 199 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 TRAPPC4Q9Y296 219 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 STK38LQ9Y2H1 464 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 HDGFL3Q9Y3E1 203 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 WIPI2Q9Y4P8 454 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 FKBP7Q9Y680 259 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 IGLV3-9A0A075B6K5 115 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 RNF103-CHMP3A0A140T963 221 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 DPPA5A6NC42 116 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 AGAP5A6NIR3 686 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 GJE1A6NN92 205 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 G3V4G9 280 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 SLC28A1O00337 649 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 GPR171O14626 319 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 ZSCAN12O43309 604 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 ZNF208O43345 1280 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 PPIHO43447 177 aaKnown RBP2.62□□□□□ -1.99
SLIRP-202ENST00000553981 MGRN1O60291 552 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 TPST1O60507 370 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 STX11O75558 287 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 LYPD3O95274 346 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 CPSF4O95639 269 aaKnown RBP2.62□□□□□ -1.99
SLIRP-202ENST00000553981 MT-ND5P03915 603 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 FGF4P08620 206 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 B4GALT1P15291 398 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 HOXB9P17482 250 aaPredicted RBP2.62□□□□□ -1.99
SLIRP-202ENST00000553981 TAC1P20366 129 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 HNF1AP20823 631 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 ATP6V1C1P21283 382 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 ACHEP22303 614 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 PRTN3P24158 256 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 GLRXP35754 106 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 MPV17P39210 176 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 WNT5AP41221 380 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 MAGEA8P43361 318 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 RPS5P46782 204 aaKnown RBP2.62□□□□□ -1.99
SLIRP-202ENST00000553981 KHKP50053 298 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 ERFP50548 548 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 POLR2HP52434 150 aaKnown RBP2.62□□□□□ -1.99
SLIRP-202ENST00000553981 CLDN8P56748 225 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 CSNK2A1P68400 391 aaPredicted RBP2.62□□□□□ -1.99
SLIRP-202ENST00000553981 SLC35A1P78382 337 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 CCL8P80075 99 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 LCN2P80188 198 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 MYBPC1Q00872 1141 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 POU3F1Q03052 451 aaPredicted RBP2.62□□□□□ -1.99
SLIRP-202ENST00000553981 CAV1Q03135 178 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 GLO1Q04760 184 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 ILF2Q12905 390 aaKnown RBP2.62□□□□□ -1.99
SLIRP-202ENST00000553981 DAG1Q14118 895 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 CASP8Q14790 479 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 ANXA2RQ3ZCQ2 193 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 VPS26BQ4G0F5 336 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 SLC9B1Q4ZJI4 515 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 SPANXN4Q5MJ08 99 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 FAM201AQ5SY85 155 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 CARD17Q5XLA6 110 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 CCBE1Q6UXH8 406 aaPredicted RBP2.62□□□□□ -1.99
SLIRP-202ENST00000553981 Q6ZR03 302 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 SERPINA11Q86U17 422 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 GPAT4Q86UL3 456 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 RNF130Q86XS8 419 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 SLC22A9Q8IVM8 553 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 SKA3Q8IX90 412 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 C20orf196Q8IYI0 205 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 C4orf33Q8N1A6 199 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 LRRC17Q8N6Y2 441 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 PRR26Q8N8Z3 221 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 OR4D11Q8NGI4 311 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 ZNF563Q8TA94 476 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 PNPT1Q8TCS8 783 aaKnown RBP2.62□□□□□ -1.99
SLIRP-202ENST00000553981 SFXN5Q8TD22 340 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 ZNF418Q8TF45 676 aaPredicted RBP2.62□□□□□ -1.99
SLIRP-202ENST00000553981 IFT81Q8WYA0 676 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 LRTOMTQ8WZ04 291 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 RDH5Q92781 318 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 TAAR8Q969N4 342 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 VPS33AQ96AX1 596 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 MTERF3Q96E29 417 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 ZMYND19Q96E35 227 aaPredicted RBP2.62□□□□□ -1.99
SLIRP-202ENST00000553981 URB1-AS1Q96HZ7 61 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 SLC35G5Q96KT7 338 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 SNX22Q96L94 193 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 OR2M2Q96R28 347 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 SORT1Q99523 831 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 CITED1Q99966 193 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 RBM4Q9BWF3 364 aaKnown RBP2.62□□□□□ -1.99
SLIRP-202ENST00000553981 OR51B6Q9H340 312 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 CRLF2Q9HC73 371 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 MYOZ1Q9NP98 299 aaPredicted RBP2.62□□□□□ -1.99
SLIRP-202ENST00000553981 EXOSC3Q9NQT5 275 aaKnown RBP2.62□□□□□ -1.99
SLIRP-202ENST00000553981 TBC1D23Q9NUY8 699 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 ADPRHL2Q9NX46 363 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 MED29Q9NX70 200 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms