RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 AHRRA9YTQ3 701 aa12.76□□□□□ -0.37
SHMT2-208ENST00000553868 SMAD7O15105 426 aaKnown RBP12.76□□□□□ -0.37
SHMT2-208ENST00000553868 APOL3O95236 402 aa12.76□□□□□ -0.37
SHMT2-208ENST00000553868 CTLA4P16410 223 aa12.76□□□□□ -0.37
SHMT2-208ENST00000553868 GUCA1AP43080 201 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-208ENST00000553868 MAP2K4P45985 399 aa12.76□□□□□ -0.37
SHMT2-208ENST00000553868 UBE2UQ5VVX9 321 aa12.76□□□□□ -0.37
SHMT2-208ENST00000553868 CARD17Q5XLA6 110 aa12.76□□□□□ -0.37
SHMT2-208ENST00000553868 XAF1Q6GPH4 301 aa12.76□□□□□ -0.37
SHMT2-208ENST00000553868 B3GLCTQ6Y288 498 aa12.76□□□□□ -0.37
SHMT2-208ENST00000553868 SHFQ7M4L6 423 aa12.76□□□□□ -0.37
SHMT2-208ENST00000553868 CD163Q86VB7 1156 aa12.76□□□□□ -0.37
SHMT2-208ENST00000553868 GLB1L2Q8IW92 636 aa12.76□□□□□ -0.37
SHMT2-208ENST00000553868 SLC35F2Q8IXU6 374 aa12.76□□□□□ -0.37
SHMT2-208ENST00000553868 KLHL36Q8N4N3 616 aa12.76□□□□□ -0.37
SHMT2-208ENST00000553868 ZIC4Q8N9L1 334 aa12.76□□□□□ -0.37
SHMT2-208ENST00000553868 FNDC9Q8TBE3 224 aa12.76□□□□□ -0.37
SHMT2-208ENST00000553868 ABHD3Q8WU67 409 aa12.76□□□□□ -0.37
SHMT2-208ENST00000553868 MUL1Q969V5 352 aa12.76□□□□□ -0.37
SHMT2-208ENST00000553868 COX4I2Q96KJ9 171 aa12.76□□□□□ -0.37
SHMT2-208ENST00000553868 ZNF385AQ96PM9 386 aaKnown RBP12.76□□□□□ -0.37
SHMT2-208ENST00000553868 INTS14Q96SY0 518 aa12.76□□□□□ -0.37
SHMT2-208ENST00000553868 BCO1Q9HAY6 547 aa12.76□□□□□ -0.37
SHMT2-208ENST00000553868 GLTPQ9NZD2 209 aa12.76□□□□□ -0.37
SHMT2-208ENST00000553868 NOSIPQ9Y314 301 aaKnown RBP12.76□□□□□ -0.37
SHMT2-208ENST00000553868 TMEM14AQ9Y6G1 99 aa12.76□□□□□ -0.37
SHMT2-208ENST00000553868 SMIM31A0A1B0GVY4 71 aa12.75□□□□□ -0.37
SHMT2-208ENST00000553868 ZNF670-ZNF695F2Z2N8 137 aa12.75□□□□□ -0.37
SHMT2-208ENST00000553868 H7C1Q1 480 aa12.75□□□□□ -0.37
SHMT2-208ENST00000553868 J3QRE1 110 aa12.75□□□□□ -0.37
SHMT2-208ENST00000553868 DCTN6O00399 190 aa12.75□□□□□ -0.37
SHMT2-208ENST00000553868 PHYHO14832 338 aa12.75□□□□□ -0.37
SHMT2-208ENST00000553868 MRPL33O75394 65 aaKnown RBP12.75□□□□□ -0.37
SHMT2-208ENST00000553868 ZNF432O94892 652 aa12.75□□□□□ -0.37
SHMT2-208ENST00000553868 RAF1P04049 648 aa12.75□□□□□ -0.37
SHMT2-208ENST00000553868 MRPL3P09001 348 aaKnown RBP12.75□□□□□ -0.37
SHMT2-208ENST00000553868 GABRA1P14867 456 aa12.75□□□□□ -0.37
SHMT2-208ENST00000553868 ZNF823P16415 610 aa12.75□□□□□ -0.37
SHMT2-208ENST00000553868 PSMB9P28065 219 aa12.75□□□□□ -0.37
SHMT2-208ENST00000553868 PTGS2P35354 604 aa12.75□□□□□ -0.37
SHMT2-208ENST00000553868 ACTA2P62736 377 aa12.75□□□□□ -0.37
SHMT2-208ENST00000553868 ACTG2P63267 376 aa12.75□□□□□ -0.37
SHMT2-208ENST00000553868 HIST3H3Q16695 136 aa12.75□□□□□ -0.37
SHMT2-208ENST00000553868 EGFL6Q8IUX8 553 aa12.75□□□□□ -0.37
SHMT2-208ENST00000553868 ERI1Q8IV48 349 aaKnown RBP12.75□□□□□ -0.37
SHMT2-208ENST00000553868 C20orf196Q8IYI0 205 aa12.75□□□□□ -0.37
SHMT2-208ENST00000553868 TMEM123Q8N131 208 aa12.75□□□□□ -0.37
SHMT2-208ENST00000553868 GPR137CQ8N3F9 429 aa12.75□□□□□ -0.37
SHMT2-208ENST00000553868 NANOGP1Q8N7R0 232 aa12.75□□□□□ -0.37
SHMT2-208ENST00000553868 OR10H5Q8NGA6 315 aa12.75□□□□□ -0.37
SHMT2-208ENST00000553868 OR52N1Q8NH53 320 aa12.75□□□□□ -0.37
SHMT2-208ENST00000553868 TMEM54Q969K7 222 aa12.75□□□□□ -0.37
SHMT2-208ENST00000553868 NMD3Q96D46 503 aaKnown RBP12.75□□□□□ -0.37
SHMT2-208ENST00000553868 FAM192AQ9GZU8 254 aa12.75□□□□□ -0.37
SHMT2-208ENST00000553868 MARCH7Q9H992 704 aa12.75□□□□□ -0.37
SHMT2-208ENST00000553868 ERVK13-1Q9NX77 482 aa12.75□□□□□ -0.37
SHMT2-208ENST00000553868 CAB39Q9Y376 341 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-208ENST00000553868 SONP18583 2426 aaKnown RBP12.74□□□□□ -0.37
SHMT2-208ENST00000553868 DPPA5A6NC42 116 aa12.74□□□□□ -0.37
SHMT2-208ENST00000553868 TMCC2O75069 709 aa12.74□□□□□ -0.37
SHMT2-208ENST00000553868 AQP8O94778 261 aa12.74□□□□□ -0.37
SHMT2-208ENST00000553868 PTHP01270 115 aa12.74□□□□□ -0.37
SHMT2-208ENST00000553868 HRGP04196 525 aa12.74□□□□□ -0.37
SHMT2-208ENST00000553868 YES1P07947 543 aa12.74□□□□□ -0.37
SHMT2-208ENST00000553868 QDPRP09417 244 aa12.74□□□□□ -0.37
SHMT2-208ENST00000553868 LAP3P28838 519 aa12.74□□□□□ -0.37
SHMT2-208ENST00000553868 NAA10P41227 235 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-208ENST00000553868 ETV1P50549 477 aa12.74□□□□□ -0.37
SHMT2-208ENST00000553868 ZNF84P51523 738 aa12.74□□□□□ -0.37
SHMT2-208ENST00000553868 ZNF133P52736 654 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-208ENST00000553868 WNT4P56705 351 aa12.74□□□□□ -0.37
SHMT2-208ENST00000553868 GALEQ14376 348 aa12.74□□□□□ -0.37
SHMT2-208ENST00000553868 SPHARQ15513 63 aa12.74□□□□□ -0.37
SHMT2-208ENST00000553868 MED22Q15528 200 aa12.74□□□□□ -0.37
SHMT2-208ENST00000553868 SYT6Q5T7P8 510 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-208ENST00000553868 RIPPLY2Q5TAB7 128 aa12.74□□□□□ -0.37
SHMT2-208ENST00000553868 OR2A2Q6IF42 318 aa12.74□□□□□ -0.37
SHMT2-208ENST00000553868 SLC25A47Q6Q0C1 308 aa12.74□□□□□ -0.37
SHMT2-208ENST00000553868 TIGD4Q8IY51 512 aa12.74□□□□□ -0.37
SHMT2-208ENST00000553868 ZNF454Q8N9F8 522 aa12.74□□□□□ -0.37
SHMT2-208ENST00000553868 ZNF511Q8NB15 262 aa12.74□□□□□ -0.37
SHMT2-208ENST00000553868 OR6N2Q8NGY6 317 aa12.74□□□□□ -0.37
SHMT2-208ENST00000553868 WNT2BQ93097 391 aa12.74□□□□□ -0.37
SHMT2-208ENST00000553868 MCHR2Q969V1 340 aa12.74□□□□□ -0.37
SHMT2-208ENST00000553868 COG8Q96MW5 612 aa12.74□□□□□ -0.37
SHMT2-208ENST00000553868 ULBP2Q9BZM5 246 aa12.74□□□□□ -0.37
SHMT2-208ENST00000553868 WDR76Q9H967 626 aa12.74□□□□□ -0.37
SHMT2-208ENST00000553868 CALHM2Q9HA72 323 aa12.74□□□□□ -0.37
SHMT2-208ENST00000553868 CLCF1Q9UBD9 225 aa12.74□□□□□ -0.37
SHMT2-208ENST00000553868 KCNG2Q9UJ96 466 aa12.74□□□□□ -0.37
SHMT2-208ENST00000553868 COA3Q9Y2R0 106 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-208ENST00000553868 FREM3P0C091 2139 aa12.73□□□□□ -0.37
SHMT2-208ENST00000553868 TVP23AA6NH52 213 aa12.73□□□□□ -0.37
SHMT2-208ENST00000553868 A6NHS1 94 aa12.73□□□□□ -0.37
SHMT2-208ENST00000553868 FIGNL2A6NMB9 653 aa12.73□□□□□ -0.37
SHMT2-208ENST00000553868 SELENOFO60613 162 aa12.73□□□□□ -0.37
SHMT2-208ENST00000553868 WDR1O75083 606 aa12.73□□□□□ -0.37
SHMT2-208ENST00000553868 KRT33AO76009 404 aa12.73□□□□□ -0.37
SHMT2-208ENST00000553868 SEC14L2O76054 403 aa12.73□□□□□ -0.37
SHMT2-208ENST00000553868 LIMS3P0CW19 117 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms