RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 PTHLHP12272 177 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 EDNRAP25101 427 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 NAA10P41227 235 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-207ENST00000553837 RAB5BP61020 215 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 ECH1Q13011 328 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 CD226Q15762 336 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 PCGF3Q3KNV8 242 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 KLHL26Q53HC5 615 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 BEST3Q8N1M1 668 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 BOLLQ8N9W6 283 aaKnown RBP11.07□□□□□ -0.64
SHMT2-207ENST00000553837 OR1S2Q8NGQ3 325 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 SLC25A28Q96A46 364 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 C3orf49Q96BT1 292 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 TCTN2Q96GX1 697 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 GFI1Q99684 422 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 Q9N2J8 555 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 SLC22A11Q9NSA0 550 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 OR5V1Q9UGF6 321 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 ETV7Q9Y603 341 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 A0A087WUJ7 227 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 TMEM272A0A1B0GTI8 110 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 NUDT19A8MXV4 375 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 CD63P08962 238 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 OR2T7P0C7T2 308 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 BDKRB2P30411 391 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 FASLGP48023 281 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 BLKP51451 505 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 TAS2R60P59551 318 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 CDNFQ49AH0 187 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 NKAIN2Q5VXU1 208 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 GLT8D1Q68CQ7 371 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 ARHGAP11AQ6P4F7 1023 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 SSX9Q7RTT3 188 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 ZNF550Q7Z398 422 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 OR2T27Q8NH04 317 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 RXFP4Q8TDU9 374 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 LMX1AQ8TE12 382 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 CCDC107Q8WV48 283 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 TGM7Q96PF1 710 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 VRK1Q99986 396 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-207ENST00000553837 ZNF471Q9BX82 626 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-207ENST00000553837 OPA3Q9H6K4 179 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 APMAPQ9HDC9 416 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 TREM2Q9NZC2 230 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 ZNF346Q9UL40 294 aaKnown RBP11.06□□□□□ -0.64
SHMT2-207ENST00000553837 OR10H1Q9Y4A9 318 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 A0A1W2PR77 199 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 H7C417 338 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 SLC25A12O75746 678 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 GLSO94925 669 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-207ENST00000553837 NDUFB2O95178 105 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 CD8AP01732 235 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 FOLR2P14207 255 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 ADCYAP1P18509 176 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 PTGFRP43088 359 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 EFNA3P52797 238 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 CHAF1BQ13112 559 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 PDZK1IP1Q13113 114 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 SSX2Q16385 188 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 LIN54Q6MZP7 749 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 H3F3CQ6NXT2 135 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 ZFP82Q8N141 532 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 SLC43A2Q8N370 569 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 NPEPL1Q8NDH3 523 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 OR4C16Q8NGL9 310 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 OR1J4Q8NGS1 313 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 RNASE11Q8TAA1 199 aaKnown RBP11.06□□□□□ -0.64
SHMT2-207ENST00000553837 SNX33Q8WV41 574 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-207ENST00000553837 RASD2Q96D21 266 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 NMNAT3Q96T66 252 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 PFDN5Q99471 154 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 ADAT1Q9BUB4 502 aaKnown RBP11.06□□□□□ -0.64
SHMT2-207ENST00000553837 ZNF576Q9H609 170 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 MTFP1Q9UDX5 166 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 TNFSF18Q9UNG2 199 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 MOKQ9UQ07 419 aa11.06□□□□□ -0.64
SHMT2-207ENST00000553837 MRPS33Q9Y291 106 aaKnown RBP11.06□□□□□ -0.64
SHMT2-207ENST00000553837 A0A087WV48 116 aa11.05□□□□□ -0.64
SHMT2-207ENST00000553837 MEX3AA1L020 520 aaKnown RBP11.05□□□□□ -0.64
SHMT2-207ENST00000553837 OR5H14A6NHG9 310 aa11.05□□□□□ -0.64
SHMT2-207ENST00000553837 ACOD1A6NK06 481 aa11.05□□□□□ -0.64
SHMT2-207ENST00000553837 C17orf51A8MQB3 221 aa11.05□□□□□ -0.64
SHMT2-207ENST00000553837 PRR32B1ATL7 298 aa11.05□□□□□ -0.64
SHMT2-207ENST00000553837 GPR37O15354 613 aa11.05□□□□□ -0.64
SHMT2-207ENST00000553837 PIN1P1O15428 100 aa11.05□□□□□ -0.64
SHMT2-207ENST00000553837 SLC31A2O15432 143 aa11.05□□□□□ -0.64
SHMT2-207ENST00000553837 PMS2P2O95744 297 aa11.05□□□□□ -0.64
SHMT2-207ENST00000553837 KLK3P07288 261 aaPredicted RBP11.05□□□□□ -0.64
SHMT2-207ENST00000553837 SLC25A4P12235 298 aa11.05□□□□□ -0.64
SHMT2-207ENST00000553837 CLDN12P56749 244 aa11.05□□□□□ -0.64
SHMT2-207ENST00000553837 HSD17B7P56937 341 aa11.05□□□□□ -0.64
SHMT2-207ENST00000553837 SNRPEP62304 92 aaKnown RBP11.05□□□□□ -0.64
SHMT2-207ENST00000553837 PRAMEF17Q5VTA0 474 aa11.05□□□□□ -0.64
SHMT2-207ENST00000553837 FNDC7Q5VTL7 733 aa11.05□□□□□ -0.64
SHMT2-207ENST00000553837 RAB12Q6IQ22 244 aa11.05□□□□□ -0.64
SHMT2-207ENST00000553837 CBLN3Q6UW01 205 aa11.05□□□□□ -0.64
SHMT2-207ENST00000553837 SYT13Q7L8C5 426 aa11.05□□□□□ -0.64
SHMT2-207ENST00000553837 PTPMT1Q8WUK0 201 aaPredicted RBP11.05□□□□□ -0.64
SHMT2-207ENST00000553837 EDAQ92838 391 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms