RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 ACOT4Q8N9L9 421 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 OR2AP1Q8NGE2 309 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 ST8SIA1Q92185 356 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 SLC38A4Q969I6 547 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 HAVCR1Q96D42 359 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 PLEKHA8Q96JA3 519 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 ZNF578Q96N58 590 aaPredicted RBP2.29□□□□□ -2.04
SCFD1-210ENST00000553693 GSDMAQ96QA5 445 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 RNF2Q99496 336 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 FMO2Q99518 471 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 C11orf70Q9BRQ4 267 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 MFSD1Q9H3U5 465 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 MRPL47Q9HD33 250 aaKnown RBP2.29□□□□□ -2.04
SCFD1-210ENST00000553693 DDX18Q9NVP1 670 aaKnown RBP2.29□□□□□ -2.04
SCFD1-210ENST00000553693 ZNF639Q9UID6 485 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 ZNF223Q9UK11 482 aaPredicted RBP2.29□□□□□ -2.04
SCFD1-210ENST00000553693 PITPNC1Q9UKF7 332 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 PSME2Q9UL46 239 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 PSG11Q9UQ72 335 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 CDH10Q9Y6N8 788 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 SPEGQ15772 3267 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 FRYQ5TBA9 3013 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 ZZEF1O43149 2961 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 PKD1L2Q7Z442 2459 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 SCN10AQ9Y5Y9 1956 aa2.29□□□□□ -2.04
SCFD1-210ENST00000553693 NAV1Q8NEY1 1877 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 ANKRD11Q6UB99 2663 aaPredicted RBP2.28□□□□□ -2.04
SCFD1-210ENST00000553693 MAP1BP46821 2468 aaKnown RBP2.28□□□□□ -2.04
SCFD1-210ENST00000553693 EP300Q09472 2414 aaPredicted RBP2.28□□□□□ -2.04
SCFD1-210ENST00000553693 TPRP12270 2363 aaKnown RBP2.28□□□□□ -2.04
SCFD1-210ENST00000553693 ADGRA3Q8IWK6 1321 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 WDR19Q8NEZ3 1342 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 RAD50Q92878 1312 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 NCF1BA6NI72 391 aaPredicted RBP2.28□□□□□ -2.04
SCFD1-210ENST00000553693 PP2D1A8MPX8 630 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 NCF1CA8MVU1 366 aaPredicted RBP2.28□□□□□ -2.04
SCFD1-210ENST00000553693 K7ENP7 123 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 RAMP3O60896 148 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 ICOSLGO75144 302 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 ZNF324O75467 553 aaPredicted RBP2.28□□□□□ -2.04
SCFD1-210ENST00000553693 SUPT7LO94864 414 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 SLITRK3O94933 977 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 LGI1O95970 557 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 FGF4P08620 206 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 POLR2MP0CAP2 368 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 ZNF286BP0CG31 522 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 ABOP16442 354 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 HTR1EP28566 365 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 CD1BP29016 333 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 HMOX2P30519 316 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 FDFT1P37268 417 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 CRYBB2P43320 205 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 MAGEA1P43355 309 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 CDK16Q00536 496 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 GBE1Q04446 702 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 SCRN3Q0VDG4 424 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 KLRB1Q12918 225 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 C1orf61Q13536 156 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 ARFRP1Q13795 201 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 ARHGAP19Q14CB8 494 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 OXA1LQ15070 435 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 BCL7AQ4VC05 210 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 TWF2Q6IBS0 349 aaKnown RBP2.28□□□□□ -2.04
SCFD1-210ENST00000553693 FAM199XQ6PEV8 388 aaPredicted RBP2.28□□□□□ -2.04
SCFD1-210ENST00000553693 C19orf35Q6ZS72 473 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 ZNF571Q7Z3V5 609 aaPredicted RBP2.28□□□□□ -2.04
SCFD1-210ENST00000553693 DHDDSQ86SQ9 333 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 COMMD1Q8N668 190 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 MARCH1Q8TCQ1 289 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 PYROXD1Q8WU10 500 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 C7orf33Q8WU49 177 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 UFD1Q92890 307 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.28□□□□□ -2.042e-9■■■■■ 43.2
SCFD1-210ENST00000553693 CELF6Q96J87 481 aaKnown RBP2.28□□□□□ -2.04
SCFD1-210ENST00000553693 HSFY1Q96LI6 401 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 NOL4LQ96MY1 436 aaPredicted RBP2.28□□□□□ -2.04
SCFD1-210ENST00000553693 GAL3ST1Q99999 423 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 C20orf24Q9BUV8 137 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 VCXQ9H320 206 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 CLSTN2Q9H4D0 955 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 POMKQ9H5K3 350 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 PLGRKTQ9HBL7 147 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 ZFP14Q9HCL3 533 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 MMP26Q9NRE1 261 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 THUMPD1Q9NXG2 353 aaKnown RBP2.28□□□□□ -2.04
SCFD1-210ENST00000553693 TREM2Q9NZC2 230 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 KCNIP1Q9NZI2 227 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 GCNT4Q9P109 453 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 OR1A1Q9P1Q5 309 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 WRAP73Q9P2S5 460 aaPredicted RBP2.28□□□□□ -2.04
SCFD1-210ENST00000553693 SLC7A8Q9UHI5 535 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 TRAF3IP3Q9Y228 551 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 CACNG2Q9Y698 323 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 NBEAQ8NFP9 2946 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 LCTP09848 1927 aa2.28□□□□□ -2.04
SCFD1-210ENST00000553693 MICAL3Q7RTP6 2002 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 CEP250Q9BV73 2442 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 RALGAPA2Q2PPJ7 1873 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 NLRC5Q86WI3 1866 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 ZBED9Q6R2W3 1325 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms