RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 LYPD2Q6UXB3 125 aa11.42□□□□□ -0.58
PRPF39-204ENST00000553605 ZNF841Q6ZN19 808 aa11.42□□□□□ -0.58
PRPF39-204ENST00000553605 TMEM19Q96HH6 336 aa11.42□□□□□ -0.58
PRPF39-204ENST00000553605 C4orf45Q96LM5 186 aa11.42□□□□□ -0.58
PRPF39-204ENST00000553605 OCSTAMPQ9BR26 566 aa11.42□□□□□ -0.58
PRPF39-204ENST00000553605 AKTIPQ9H8T0 292 aa11.42□□□□□ -0.58
PRPF39-204ENST00000553605 SIAEQ9HAT2 523 aa11.42□□□□□ -0.58
PRPF39-204ENST00000553605 SELENONQ9NZV5 590 aa11.42□□□□□ -0.58
PRPF39-204ENST00000553605 FAM96BQ9Y3D0 163 aa11.42□□□□□ -0.58
PRPF39-204ENST00000553605 E9PBE3 544 aa11.41□□□□□ -0.58
PRPF39-204ENST00000553605 FSTL3O95633 263 aa11.41□□□□□ -0.58
PRPF39-204ENST00000553605 MT-ATP6P00846 226 aa11.41□□□□□ -0.58
PRPF39-204ENST00000553605 KRT4P19013 534 aa11.41□□□□□ -0.58
PRPF39-204ENST00000553605 EPHA3P29320 983 aa11.41□□□□□ -0.58
PRPF39-204ENST00000553605 CASQ1P31415 396 aa11.41□□□□□ -0.58
PRPF39-204ENST00000553605 MVDP53602 400 aa11.41□□□□□ -0.58
PRPF39-204ENST00000553605 CLRN1P58418 232 aa11.41□□□□□ -0.58
PRPF39-204ENST00000553605 DSTNP60981 165 aa11.41□□□□□ -0.58
PRPF39-204ENST00000553605 PSG4Q00888 419 aa11.41□□□□□ -0.58
PRPF39-204ENST00000553605 HIST3H3Q16695 136 aa11.41□□□□□ -0.58
PRPF39-204ENST00000553605 METTL11BQ5VVY1 283 aa11.41□□□□□ -0.58
PRPF39-204ENST00000553605 CD276Q5ZPR3 534 aa11.41□□□□□ -0.58
PRPF39-204ENST00000553605 LYG1Q8N1E2 194 aa11.41□□□□□ -0.58
PRPF39-204ENST00000553605 PPP1R36Q96LQ0 422 aa11.41□□□□□ -0.58
PRPF39-204ENST00000553605 ZNF347Q96SE7 839 aa11.41□□□□□ -0.58
PRPF39-204ENST00000553605 ZNF607Q96SK3 696 aa11.41□□□□□ -0.58
PRPF39-204ENST00000553605 FN3KRPQ9HA64 309 aa11.41□□□□□ -0.58
PRPF39-204ENST00000553605 TAS2R5Q9NYW4 299 aa11.41□□□□□ -0.58
PRPF39-204ENST00000553605 SIGLEC9Q9Y336 463 aa11.41□□□□□ -0.58
PRPF39-204ENST00000553605 TMEM247A6NEH6 219 aa11.4□□□□□ -0.58
PRPF39-204ENST00000553605 RNASEK-C17orf49H0YIS7 233 aa11.4□□□□□ -0.58
PRPF39-204ENST00000553605 RNF13O43567 381 aa11.4□□□□□ -0.58
PRPF39-204ENST00000553605 IGHG1P01857 330 aa11.4□□□□□ -0.58
PRPF39-204ENST00000553605 GSTM3P21266 225 aa11.4□□□□□ -0.58
PRPF39-204ENST00000553605 KITLGP21583 273 aa11.4□□□□□ -0.58
PRPF39-204ENST00000553605 SLC6A2P23975 617 aa11.4□□□□□ -0.58
PRPF39-204ENST00000553605 EFNB2P52799 333 aa11.4□□□□□ -0.58
PRPF39-204ENST00000553605 EMX1Q04741 257 aaPredicted RBP11.4□□□□□ -0.58
PRPF39-204ENST00000553605 COX10Q12887 443 aa11.4□□□□□ -0.58
PRPF39-204ENST00000553605 NSUN5P1Q3KNT7 163 aa11.4□□□□□ -0.58
PRPF39-204ENST00000553605 FAM201AQ5SY85 155 aa11.4□□□□□ -0.58
PRPF39-204ENST00000553605 CEP85LQ5SZL2 805 aa11.4□□□□□ -0.58
PRPF39-204ENST00000553605 C11orf88Q6PI97 169 aa11.4□□□□□ -0.58
PRPF39-204ENST00000553605 ARL9Q6T311 187 aa11.4□□□□□ -0.58
PRPF39-204ENST00000553605 DCDC5Q6ZRR9 648 aa11.4□□□□□ -0.58
PRPF39-204ENST00000553605 ALDH16A1Q8IZ83 802 aa11.4□□□□□ -0.58
PRPF39-204ENST00000553605 C4orf33Q8N1A6 199 aa11.4□□□□□ -0.58
PRPF39-204ENST00000553605 ATG16L2Q8NAA4 619 aa11.4□□□□□ -0.58
PRPF39-204ENST00000553605 TEX37Q96LM6 180 aa11.4□□□□□ -0.58
PRPF39-204ENST00000553605 ZIM3Q96PE6 472 aa11.4□□□□□ -0.58
PRPF39-204ENST00000553605 MMP28Q9H239 520 aa11.4□□□□□ -0.58
PRPF39-204ENST00000553605 PPA2Q9H2U2 334 aa11.4□□□□□ -0.58
PRPF39-204ENST00000553605 RYR2Q92736 4967 aa11.39□□□□□ -0.59
PRPF39-204ENST00000553605 LRRC30A6NM36 301 aa11.39□□□□□ -0.59
PRPF39-204ENST00000553605 CDAP32320 146 aa11.39□□□□□ -0.59
PRPF39-204ENST00000553605 SERPINB5P36952 375 aa11.39□□□□□ -0.59
PRPF39-204ENST00000553605 NPY4RP50391 375 aa11.39□□□□□ -0.59
PRPF39-204ENST00000553605 ERVK-25P63136 954 aa11.39□□□□□ -0.59
PRPF39-204ENST00000553605 MRPS34P82930 218 aaKnown RBP11.39□□□□□ -0.59
PRPF39-204ENST00000553605 LRRC74AQ0VAA2 488 aa11.39□□□□□ -0.59
PRPF39-204ENST00000553605 DOC2BQ14184 412 aa11.39□□□□□ -0.59
PRPF39-204ENST00000553605 C1orf122Q6ZSJ8 110 aa11.39□□□□□ -0.59
PRPF39-204ENST00000553605 PDZD9Q8IXQ8 264 aa11.39□□□□□ -0.59
PRPF39-204ENST00000553605 KLHDC1Q8N7A1 406 aa11.39□□□□□ -0.59
PRPF39-204ENST00000553605 PNLDC1Q8NA58 520 aaKnown RBP11.39□□□□□ -0.59
PRPF39-204ENST00000553605 SPERTQ8NA61 448 aa11.39□□□□□ -0.59
PRPF39-204ENST00000553605 R3HDM4Q96D70 268 aa11.39□□□□□ -0.59
PRPF39-204ENST00000553605 CMBLQ96DG6 245 aa11.39□□□□□ -0.59
PRPF39-204ENST00000553605 TECTBQ96PL2 329 aa11.39□□□□□ -0.59
PRPF39-204ENST00000553605 OR52E6Q96RD3 313 aa11.39□□□□□ -0.59
PRPF39-204ENST00000553605 TMEM43Q9BTV4 400 aa11.39□□□□□ -0.59
PRPF39-204ENST00000553605 SIRPDQ9H106 197 aa11.39□□□□□ -0.59
PRPF39-204ENST00000553605 POFUT1Q9H488 388 aa11.39□□□□□ -0.59
PRPF39-204ENST00000553605 TMEM27Q9HBJ8 222 aa11.39□□□□□ -0.59
PRPF39-204ENST00000553605 ZNRD1Q9P1U0 126 aa11.39□□□□□ -0.59
PRPF39-204ENST00000553605 A0A0B4J2E0 115 aa11.38□□□□□ -0.59
PRPF39-204ENST00000553605 A0A1B0GX12 115 aa11.38□□□□□ -0.59
PRPF39-204ENST00000553605 FBP1P09467 338 aa11.38□□□□□ -0.59
PRPF39-204ENST00000553605 IGLL1P15814 213 aa11.38□□□□□ -0.59
PRPF39-204ENST00000553605 TUBG1P23258 451 aa11.38□□□□□ -0.59
PRPF39-204ENST00000553605 PSMB10P40306 273 aa11.38□□□□□ -0.59
PRPF39-204ENST00000553605 KIR2DS4P43632 304 aa11.38□□□□□ -0.59
PRPF39-204ENST00000553605 CKAP4Q07065 602 aaKnown RBP11.38□□□□□ -0.59
PRPF39-204ENST00000553605 OR1Q1Q15612 314 aa11.38□□□□□ -0.59
PRPF39-204ENST00000553605 SGCAQ16586 387 aa11.38□□□□□ -0.59
PRPF39-204ENST00000553605 ZNF181Q2M3W8 571 aa11.38□□□□□ -0.59
PRPF39-204ENST00000553605 C1orf87Q8N0U7 546 aa11.38□□□□□ -0.59
PRPF39-204ENST00000553605 NPEPL1Q8NDH3 523 aa11.38□□□□□ -0.59
PRPF39-204ENST00000553605 OR4F17Q8NGA8 305 aa11.38□□□□□ -0.59
PRPF39-204ENST00000553605 NABP1Q96AH0 204 aa11.38□□□□□ -0.59
PRPF39-204ENST00000553605 MEGF10Q96KG7 1140 aa11.38□□□□□ -0.59
PRPF39-204ENST00000553605 OR4F4Q96R69 305 aa11.38□□□□□ -0.59
PRPF39-204ENST00000553605 MRPL13Q9BYD1 178 aaKnown RBP11.38□□□□□ -0.59
PRPF39-204ENST00000553605 OR2H1Q9GZK4 316 aa11.38□□□□□ -0.59
PRPF39-204ENST00000553605 WNT5BQ9H1J7 359 aa11.38□□□□□ -0.59
PRPF39-204ENST00000553605 BCL2L10Q9HD36 194 aa11.38□□□□□ -0.59
PRPF39-204ENST00000553605 TUBG2Q9NRH3 451 aa11.38□□□□□ -0.59
PRPF39-204ENST00000553605 MKS1Q9NXB0 559 aa11.38□□□□□ -0.59
PRPF39-204ENST00000553605 THUMPD1Q9NXG2 353 aaKnown RBP11.38□□□□□ -0.59
PRPF39-204ENST00000553605 CAB39Q9Y376 341 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms