RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 POP5Q969H6 163 aaKnown RBP16.53■□□□□ 0.24
PTCH1-227ENST00000553256 CCDC124Q96CT7 223 aaKnown RBP16.53■□□□□ 0.24
PTCH1-227ENST00000553256 TSSK2Q96PF2 358 aa16.53■□□□□ 0.24
PTCH1-227ENST00000553256 RHNO1Q9BSD3 238 aa16.53■□□□□ 0.24
PTCH1-227ENST00000553256 COA3Q9Y2R0 106 aaPredicted RBP16.53■□□□□ 0.24
PTCH1-227ENST00000553256 YLPM1P49750 1951 aaKnown RBP16.53■□□□□ 0.24
PTCH1-227ENST00000553256 DNHD1Q96M86 4753 aa16.52■□□□□ 0.24
PTCH1-227ENST00000553256 A0A1W2PPL8 197 aa16.52■□□□□ 0.24
PTCH1-227ENST00000553256 SYNGR3O43761 229 aa16.52■□□□□ 0.24
PTCH1-227ENST00000553256 SLC16A7O60669 478 aa16.52■□□□□ 0.24
PTCH1-227ENST00000553256 CLPTM1O96005 669 aa16.52■□□□□ 0.24
PTCH1-227ENST00000553256 CSF3P09919 207 aa16.52■□□□□ 0.24
PTCH1-227ENST00000553256 FAM157BP0CG42 384 aa16.52■□□□□ 0.24
PTCH1-227ENST00000553256 SLC25A16P16260 332 aa16.52■□□□□ 0.24
PTCH1-227ENST00000553256 HIST1H1CP16403 213 aaKnown RBP16.52■□□□□ 0.24
PTCH1-227ENST00000553256 SLC6A6P31641 620 aa16.52■□□□□ 0.24
PTCH1-227ENST00000553256 IFNGR2P38484 337 aa16.52■□□□□ 0.24
PTCH1-227ENST00000553256 RPS6KA3P51812 740 aa16.52■□□□□ 0.24
PTCH1-227ENST00000553256 RPS23P62266 143 aaKnown RBP16.52■□□□□ 0.24
PTCH1-227ENST00000553256 LSM6P62312 80 aaKnown RBP16.52■□□□□ 0.24
PTCH1-227ENST00000553256 HIST1H3AP68431 136 aa16.52■□□□□ 0.24
PTCH1-227ENST00000553256 GALK2Q01415 458 aa16.52■□□□□ 0.24
PTCH1-227ENST00000553256 HIST2H3PS2Q5TEC6 136 aa16.52■□□□□ 0.24
PTCH1-227ENST00000553256 OTPQ5XKR4 325 aa16.52■□□□□ 0.24
PTCH1-227ENST00000553256 OR2T5Q6IEZ7 315 aa16.52■□□□□ 0.24
PTCH1-227ENST00000553256 ZNF774Q6NX45 483 aa16.52■□□□□ 0.24
PTCH1-227ENST00000553256 HIST2H3AQ71DI3 136 aa16.52■□□□□ 0.24
PTCH1-227ENST00000553256 ZBTB46Q86UZ6 589 aa16.52■□□□□ 0.24
PTCH1-227ENST00000553256 OR6V1Q8N148 313 aa16.52■□□□□ 0.24
PTCH1-227ENST00000553256 LINC00471Q8N535 108 aa16.52■□□□□ 0.24
PTCH1-227ENST00000553256 NPEPL1Q8NDH3 523 aa16.52■□□□□ 0.24
PTCH1-227ENST00000553256 OR1J2Q8NGS2 313 aa16.52■□□□□ 0.24
PTCH1-227ENST00000553256 OR2T29Q8NH02 315 aa16.52■□□□□ 0.24
PTCH1-227ENST00000553256 CANT1Q8WVQ1 401 aa16.52■□□□□ 0.24
PTCH1-227ENST00000553256 FAM168AQ92567 244 aa16.52■□□□□ 0.24
PTCH1-227ENST00000553256 FOXN4Q96NZ1 517 aa16.52■□□□□ 0.24
PTCH1-227ENST00000553256 ERMAPQ96PL5 475 aaPredicted RBP16.52■□□□□ 0.24
PTCH1-227ENST00000553256 SYT3Q9BQG1 590 aa16.52■□□□□ 0.24
PTCH1-227ENST00000553256 DGCR6LQ9BY27 220 aa16.52■□□□□ 0.24
PTCH1-227ENST00000553256 NDEL1Q9GZM8 345 aa16.52■□□□□ 0.24
PTCH1-227ENST00000553256 EGLN3Q9H6Z9 239 aa16.52■□□□□ 0.24
PTCH1-227ENST00000553256 TMCC3Q9ULS5 477 aa16.52■□□□□ 0.24
PTCH1-227ENST00000553256 FZR1Q9UM11 496 aa16.52■□□□□ 0.24
PTCH1-227ENST00000553256 CDH10Q9Y6N8 788 aa16.52■□□□□ 0.24
PTCH1-227ENST00000553256 IQCMA0A1B0GVH7 501 aa16.51■□□□□ 0.23
PTCH1-227ENST00000553256 OR6C68A6NDL8 312 aa16.51■□□□□ 0.23
PTCH1-227ENST00000553256 VSTM5A8MXK1 200 aa16.51■□□□□ 0.23
PTCH1-227ENST00000553256 KHDRBS3O75525 346 aaKnown RBP16.51■□□□□ 0.23
PTCH1-227ENST00000553256 ADRA2AP08913 450 aa16.51■□□□□ 0.23
PTCH1-227ENST00000553256 RAP2AP10114 183 aa16.51■□□□□ 0.23
PTCH1-227ENST00000553256 COX5BP10606 129 aa16.51■□□□□ 0.23
PTCH1-227ENST00000553256 GIFP27352 417 aa16.51■□□□□ 0.23
PTCH1-227ENST00000553256 HSF2Q03933 536 aa16.51■□□□□ 0.23
PTCH1-227ENST00000553256 PLP2Q04941 152 aa16.51■□□□□ 0.23
PTCH1-227ENST00000553256 MICAQ29983 383 aa16.51■□□□□ 0.23
PTCH1-227ENST00000553256 KRTAP21-3Q3LHN1 58 aa16.51■□□□□ 0.23
PTCH1-227ENST00000553256 RASSF6Q6ZTQ3 369 aa16.51■□□□□ 0.23
PTCH1-227ENST00000553256 GLB1L2Q8IW92 636 aa16.51■□□□□ 0.23
PTCH1-227ENST00000553256 NEU4Q8WWR8 484 aaPredicted RBP16.51■□□□□ 0.23
PTCH1-227ENST00000553256 C11orf40Q8WZ69 217 aa16.51■□□□□ 0.23
PTCH1-227ENST00000553256 MARS2Q96GW9 593 aaKnown RBP16.51■□□□□ 0.23
PTCH1-227ENST00000553256 NMNAT3Q96T66 252 aa16.51■□□□□ 0.23
PTCH1-227ENST00000553256 VRK1Q99986 396 aaPredicted RBP16.51■□□□□ 0.23
PTCH1-227ENST00000553256 CHID1Q9BWS9 393 aa16.51■□□□□ 0.23
PTCH1-227ENST00000553256 CADM1Q9BY67 442 aaKnown RBP16.51■□□□□ 0.23
PTCH1-227ENST00000553256 BCL2L14Q9BZR8 327 aa16.51■□□□□ 0.23
PTCH1-227ENST00000553256 RACGAP1Q9H0H5 632 aa16.51■□□□□ 0.23
PTCH1-227ENST00000553256 CDH20Q9HBT6 801 aa16.51■□□□□ 0.23
PTCH1-227ENST00000553256 CCNB1IP1Q9NPC3 277 aa16.51■□□□□ 0.23
PTCH1-227ENST00000553256 B9D1Q9UPM9 204 aa16.51■□□□□ 0.23
PTCH1-227ENST00000553256 CUBNO60494 3623 aa16.5■□□□□ 0.23
PTCH1-227ENST00000553256 TCRBV3S1A0A5B6 114 aa16.5■□□□□ 0.23
PTCH1-227ENST00000553256 OR6C6A6NF89 314 aa16.5■□□□□ 0.23
PTCH1-227ENST00000553256 C12orf71A8MTZ7 269 aa16.5■□□□□ 0.23
PTCH1-227ENST00000553256 NDUFS8O00217 210 aa16.5■□□□□ 0.23
PTCH1-227ENST00000553256 IDH3BO43837 385 aa16.5■□□□□ 0.23
PTCH1-227ENST00000553256 STAMBPO95630 424 aa16.5■□□□□ 0.23
PTCH1-227ENST00000553256 GPANK1O95872 356 aa16.5■□□□□ 0.23
PTCH1-227ENST00000553256 NGFP01138 241 aa16.5■□□□□ 0.23
PTCH1-227ENST00000553256 APLNRP35414 380 aa16.5■□□□□ 0.23
PTCH1-227ENST00000553256 RAD52P43351 418 aa16.5■□□□□ 0.23
PTCH1-227ENST00000553256 ALDH3B1P43353 468 aa16.5■□□□□ 0.23
PTCH1-227ENST00000553256 PCBD1P61457 104 aa16.5■□□□□ 0.23
PTCH1-227ENST00000553256 MAD2L1BPQ15013 274 aaPredicted RBP16.5■□□□□ 0.23
PTCH1-227ENST00000553256 DNAL1Q4LDG9 190 aa16.5■□□□□ 0.23
PTCH1-227ENST00000553256 FAM98BQ52LJ0 330 aaKnown RBP16.5■□□□□ 0.23
PTCH1-227ENST00000553256 CCDC92Q53HC0 331 aaPredicted RBP16.5■□□□□ 0.23
PTCH1-227ENST00000553256 ELFN2Q5R3F8 820 aa16.5■□□□□ 0.23
PTCH1-227ENST00000553256 RGS7BPQ6MZT1 257 aaPredicted RBP16.5■□□□□ 0.23
PTCH1-227ENST00000553256 CD300LDQ6UXZ3 194 aa16.5■□□□□ 0.23
PTCH1-227ENST00000553256 RFPL4BQ6ZWI9 263 aa16.5■□□□□ 0.23
PTCH1-227ENST00000553256 VASH1Q7L8A9 365 aaPredicted RBP16.5■□□□□ 0.23
PTCH1-227ENST00000553256 TMEM179BQ7Z7N9 219 aa16.5■□□□□ 0.23
PTCH1-227ENST00000553256 ZNF786Q8N393 782 aa16.5■□□□□ 0.23
PTCH1-227ENST00000553256 PAPD5Q8NDF8 572 aaKnown RBP16.5■□□□□ 0.23
PTCH1-227ENST00000553256 SLCO4A1Q96BD0 722 aa16.5■□□□□ 0.23
PTCH1-227ENST00000553256 RAB1BQ9H0U4 201 aa16.5■□□□□ 0.23
PTCH1-227ENST00000553256 KCNN2Q9H2S1 579 aa16.5■□□□□ 0.23
PTCH1-227ENST00000553256 MYOZ1Q9NP98 299 aaPredicted RBP16.5■□□□□ 0.23
PTCH1-227ENST00000553256 REV1Q9UBZ9 1251 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms