RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 AKR7A3O95154 331 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 UBL3O95164 117 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 IGHV1-46P01743 117 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 HLA-HP01893 362 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 FBP1P09467 338 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 ACP2P11117 423 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 CHN1P15882 459 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 ZNF14P17017 642 aaPredicted RBP4.27□□□□□ -1.73
CKAP4-203ENST00000553039 ZNF43P17038 809 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 EPHA3P29320 983 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 RYKP34925 604 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 PHBP35232 272 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 MAGEA4P43358 317 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 POLR2HP52434 150 aaKnown RBP4.27□□□□□ -1.73
CKAP4-203ENST00000553039 EFNB2P52799 333 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 FGF12P61328 243 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 PAX2Q02962 417 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 RBBP4Q09028 425 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 ZNF763Q0D2J5 394 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 HSPB3Q12988 150 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 PDIA2Q13087 525 aaKnown RBP4.27□□□□□ -1.73
CKAP4-203ENST00000553039 C1DQ13901 141 aaKnown RBP4.27□□□□□ -1.73
CKAP4-203ENST00000553039 CEACAM7Q14002 265 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 ZKSCAN8Q15776 578 aaPredicted RBP4.27□□□□□ -1.73
CKAP4-203ENST00000553039 UAP1Q16222 522 aaPredicted RBP4.27□□□□□ -1.73
CKAP4-203ENST00000553039 CEACAM16Q2WEN9 425 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 SPDYAQ5MJ70 313 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 CEP85LQ5SZL2 805 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 GRTP1Q5TC63 336 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 ZNF551Q7Z340 670 aaPredicted RBP4.27□□□□□ -1.73
CKAP4-203ENST00000553039 DPPA2Q7Z7J5 298 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 ZER1Q7Z7L7 766 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 MYPOPQ86VE0 399 aaPredicted RBP4.27□□□□□ -1.73
CKAP4-203ENST00000553039 RNF130Q86XS8 419 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 KLHDC1Q8N7A1 406 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 OR4F6Q8NGB9 312 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 OIT3Q8WWZ8 545 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 ZNF524Q96C55 264 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 DNAJA3Q96EY1 480 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 KIRREL1Q96J84 757 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 SAMD8Q96LT4 415 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 ALKBH3Q96Q83 286 aaPredicted RBP4.27□□□□□ -1.73
CKAP4-203ENST00000553039 GPR22Q99680 433 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 CPNE1Q99829 537 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 PCGF1Q9BSM1 259 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 MCRIP2Q9BUT9 160 aaKnown RBP4.27□□□□□ -1.73
CKAP4-203ENST00000553039 OR11A1Q9GZK7 315 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 PPA2Q9H2U2 334 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 C1orf198Q9H425 327 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 TOR3AQ9H497 397 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 CCDC134Q9H6E4 229 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 CDH20Q9HBT6 801 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 B3GAT2Q9NPZ5 323 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 FARSBQ9NSD9 589 aaKnown RBP4.27□□□□□ -1.73
CKAP4-203ENST00000553039 EIF3KQ9UBQ5 218 aaKnown RBP4.27□□□□□ -1.73
CKAP4-203ENST00000553039 FOXJ3Q9UPW0 622 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 SLC35A3Q9Y2D2 325 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 TMED7Q9Y3B3 224 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 A0A087WUV0 522 aaPredicted RBP4.26□□□□□ -1.73
CKAP4-203ENST00000553039 IGHV1-69DA0A0B4J2H0 117 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 DUXAA6NLW8 204 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 ZNF879B4DU55 563 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 TEX22C9J3V5 150 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 E7ESA3 106 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 NPIPB9F8W1W9 429 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 H3BQF6 201 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 MANBAO00462 879 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 FBP2O00757 339 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 TM9SF1O15321 606 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 AKAP8O43823 692 aaKnown RBP4.26□□□□□ -1.73
CKAP4-203ENST00000553039 IGHV1-69P01742 117 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 THY1P04216 161 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 CHRM4P08173 479 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 CD55P08174 381 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 ADH4P08319 380 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 ABHD2P08910 425 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 RBP1P09455 135 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 UBTFL6P0CB48 400 aaPredicted RBP4.26□□□□□ -1.73
CKAP4-203ENST00000553039 UQCRBP14927 111 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 RPS2P15880 293 aaKnown RBP4.26□□□□□ -1.73
CKAP4-203ENST00000553039 GCSHP23434 173 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 SLC6A2P23975 617 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 EEF1B2P24534 225 aaKnown RBP4.26□□□□□ -1.73
CKAP4-203ENST00000553039 CXCR1P25024 350 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 GTF2E2P29084 291 aaKnown RBP4.26□□□□□ -1.73
CKAP4-203ENST00000553039 PRKAR1BP31321 381 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 CRATP43155 626 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 IDH2P48735 452 aaKnown RBP4.26□□□□□ -1.73
CKAP4-203ENST00000553039 ANXA11P50995 505 aaKnown RBP4.26□□□□□ -1.73
CKAP4-203ENST00000553039 RAD23AP54725 363 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 RAP2BP61225 183 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 SEC61A1P61619 476 aaKnown RBP4.26□□□□□ -1.73
CKAP4-203ENST00000553039 RAE1P78406 368 aaKnown RBP4.26□□□□□ -1.73
CKAP4-203ENST00000553039 TNFAIP6P98066 277 aaPredicted RBP4.26□□□□□ -1.73
CKAP4-203ENST00000553039 PLP2Q04941 152 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 SKP2Q13309 424 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 OR7A5Q15622 319 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 ZNF141Q15928 474 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 GSTA3Q16772 222 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms