RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 KRT80Q6KB66 452 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 ZCCHC12Q6PEW1 402 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 ZNF841Q6ZN19 808 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 CREB3L2Q70SY1 520 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 FRA10AC1Q70Z53 315 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 SMIM29Q86T20 159 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 MDP1Q86V88 176 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 ZC3HC1Q86WB0 502 aaKnown RBP1.82□□□□□ -2.12
PTCH1-223ENST00000551623 PTOV1Q86YD1 416 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 ZNF584Q8IVC4 421 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 ZBED8Q8IZ13 594 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 TMEM123Q8N131 208 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 C11orf42Q8N5U0 333 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 CCDC89Q8N998 374 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 CDRT4Q8N9R6 151 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 OR9K2Q8NGE7 335 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 OR4C13Q8NGP0 309 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 ZNF519Q8TB69 540 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 ESAMQ96AP7 390 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 LRRC39Q96DD0 335 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 ELP4Q96EB1 424 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 NEURL3Q96EH8 262 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 GIMAP5Q96F15 307 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 CERS2Q96G23 380 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 C16orf58Q96GQ5 468 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 MAELQ96JY0 434 aaKnown RBP1.82□□□□□ -2.12
PTCH1-223ENST00000551623 C3orf30Q96M34 536 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 CCDC42Q96M95 316 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 AMDHD1Q96NU7 426 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 ZNF385AQ96PM9 386 aaKnown RBP1.82□□□□□ -2.12
PTCH1-223ENST00000551623 ALKBH3Q96Q83 286 aaPredicted RBP1.82□□□□□ -2.12
PTCH1-223ENST00000551623 ATOH8Q96SQ7 321 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 CITED2Q99967 270 aaPredicted RBP1.82□□□□□ -2.12
PTCH1-223ENST00000551623 RHOXF2Q9BQY4 288 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 FAIM2Q9BWQ8 316 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 NMUR2Q9GZQ4 415 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 HOXD1Q9GZZ0 328 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 NHEJ1Q9H9Q4 299 aaPredicted RBP1.82□□□□□ -2.12
PTCH1-223ENST00000551623 CRLF2Q9HC73 371 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 SLC35C2Q9NQQ7 365 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 SERINC1Q9NRX5 453 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 CYSLTR2Q9NS75 346 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 TMEM106BQ9NUM4 274 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 ACER3Q9NUN7 267 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 DDX18Q9NVP1 670 aaKnown RBP1.82□□□□□ -2.12
PTCH1-223ENST00000551623 AHSPQ9NZD4 102 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 TMEM181Q9P2C4 612 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 OPTCQ9UBM4 332 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 CHRNA9Q9UGM1 479 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 PCDHGB4Q9UN71 923 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 CARD8Q9Y2G2 431 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 MAB21L2Q9Y586 359 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 SPIN1Q9Y657 262 aaPredicted RBP1.82□□□□□ -2.12
PTCH1-223ENST00000551623 SACSQ9NZJ4 4579 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 IGHV3OR16-10A0A075B7F0 116 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 A0A1W2PPW3 197 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 BTBD17A6NE02 478 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 NKX6-3A6NJ46 265 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 ZSCAN5BA6NJL1 495 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 LIPT2A6NK58 231 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 VGLL3A8MV65 326 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 H3BNH8 94 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 TMEM178BH3BS89 294 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 FBP2O00757 339 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 ZNF264O43296 627 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 RAD51CO43502 376 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 BUB3O43684 328 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 GMFGO60234 142 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 TBX19O60806 448 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 NPIPB7O75200 414 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 SH3BGRLO75368 114 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 SLC22A3O75751 556 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 CLPTM1O96005 669 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 OPN1SWP03999 348 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 ZSCAN5DPP0CG00 497 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 OR12D1P0DN82 309 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 CD28P10747 220 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 THRBP10828 461 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 ACP2P11117 423 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 UBL4AP11441 157 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 FCGR1AP12314 374 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 HPGDP15428 266 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 CD1DP15813 335 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 MYF6P23409 242 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 HOXD3P31249 432 aaPredicted RBP1.81□□□□□ -2.12
PTCH1-223ENST00000551623 GABRA3P34903 492 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 PITPNBP48739 271 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 NPY4RP50391 375 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 TUBA1BP68363 451 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 SLC35A1P78382 337 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 ARF1P84077 181 aaKnown RBP1.81□□□□□ -2.12
PTCH1-223ENST00000551623 ACSM1Q08AH1 577 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 PMS2P3Q13401 168 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 DDX39BQ13838 428 aaKnown RBP1.81□□□□□ -2.12
PTCH1-223ENST00000551623 CBFBQ13951 182 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 HEPACAMQ14CZ8 416 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 OR4D1Q15615 310 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 ZNF141Q15928 474 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 DUSP5Q16690 384 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 TRMT5Q32P41 509 aaKnown RBP1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms