RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 TSPAN19P0C672 248 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 THRBP10828 461 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 ZNF32P17041 273 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 FUT1P19526 365 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 GCH1P30793 250 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 LIPAP38571 399 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 AQP2P41181 271 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 GZMMP51124 257 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 ZNF81P51508 661 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 MMP15P51511 669 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 CRYBA2P53672 197 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 TAS2R41P59536 307 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 GLO1Q04760 184 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 SLC3A1Q07837 685 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 TAF11Q15544 211 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 TSTQ16762 297 aaKnown RBP6.47□□□□□ -1.37
NEK3-201ENST00000550331 ZNF718Q3SXZ3 478 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 ZMAT1Q5H9K5 638 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 DCAF12L2Q5VW00 463 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 MBNL2Q5VZF2 373 aaKnown RBP6.47□□□□□ -1.37
NEK3-201ENST00000550331 METTL21CQ5VZV1 264 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 USP51Q70EK9 711 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 PEG10Q86TG7 708 aaKnown RBP6.47□□□□□ -1.37
NEK3-201ENST00000550331 LRRC18Q8N456 261 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 SYT14Q8NB59 555 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 ICA1LQ8NDH6 482 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 OR10A6Q8NH74 314 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 NANPQ8TBE9 248 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 FNDC8Q8TC99 324 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 TMEM239Q8WW34 195 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 NABP1Q96AH0 204 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 SGTBQ96EQ0 304 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 MARS2Q96GW9 593 aaKnown RBP6.47□□□□□ -1.37
NEK3-201ENST00000550331 POM121L2Q96KW2 1035 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 ATP6V1G3Q96LB4 118 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 DIRC2Q96SL1 478 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 SH3GL1Q99961 368 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 EGLN1Q9GZT9 426 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 CCNB1IP1Q9NPC3 277 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 EIF3KQ9UBQ5 218 aaKnown RBP6.47□□□□□ -1.37
NEK3-201ENST00000550331 SH3GLB1Q9Y371 365 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 CACNG2Q9Y698 323 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 LOC100509620A0A075B734 347 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 PPIAL4EA0A075B759 164 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 PPIAL4CA0A0B4J2A2 164 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 A0A0G2JK05 382 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 ZSCAN5BA6NJL1 495 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 PPIAL4DF5H284 164 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 UBOX5O94941 541 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 SLC2A10O95528 541 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 FSHBP01225 129 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 IFNA14P01570 189 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 IGHMP01871 453 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 CD55P08174 381 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 PPIAL4FP0DN26 164 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 MAKP20794 623 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 CCNOP22674 350 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 WNT5AP41221 380 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 GDI2P50395 445 aaKnown RBP6.46□□□□□ -1.38
NEK3-201ENST00000550331 CD47Q08722 323 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 CYLC2Q14093 348 aaPredicted RBP6.46□□□□□ -1.38
NEK3-201ENST00000550331 ALG10Q5BKT4 473 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 COQ5Q5HYK3 327 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 PRR31Q5SQ13 230 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 THEM4Q5T1C6 240 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 FAM27BQ5VT28 67 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 FAM205BPQ63HN1 556 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 ERICH5Q6P6B1 374 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 RFPL4BQ6ZWI9 263 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 CALHM3Q86XJ0 350 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 NKAIN4Q8IVV8 208 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 ZNF101Q8IZC7 436 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 OR8J3Q8NGG0 315 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 PFN4Q8NHR9 129 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 ABHD4Q8TB40 342 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 SLC25A40Q8TBP6 338 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 KLF14Q8TD94 323 aaPredicted RBP6.46□□□□□ -1.38
NEK3-201ENST00000550331 TMEM255BQ8WV15 326 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 IPCEF1Q8WWN9 437 aaPredicted RBP6.46□□□□□ -1.38
NEK3-201ENST00000550331 CCL17Q92583 94 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 GTF3AQ92664 365 aaKnown RBP6.46□□□□□ -1.38
NEK3-201ENST00000550331 HDAC2Q92769 488 aaKnown RBP6.46□□□□□ -1.38
NEK3-201ENST00000550331 UTP4Q969X6 686 aaKnown RBP6.46□□□□□ -1.38
NEK3-201ENST00000550331 MAGEB18Q96M61 343 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 GAL3ST1Q99999 423 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 ALG12Q9BV10 488 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 TXNIPQ9H3M7 391 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 C20orf141Q9NUB4 165 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 MRGBPQ9NV56 204 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 INTS9Q9NV88 658 aaKnown RBP6.46□□□□□ -1.38
NEK3-201ENST00000550331 RIMS3Q9UJD0 308 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 ZDHHC8Q9ULC8 765 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 HIF3AQ9Y2N7 669 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 MED31Q9Y3C7 131 aa6.46□□□□□ -1.38
NEK3-201ENST00000550331 IGKV1D-43A0A0B4J1Z2 117 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 C5orf49A4QMS7 147 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 HMGB1P1B2RPK0 211 aaPredicted RBP6.45□□□□□ -1.38
NEK3-201ENST00000550331 FXYD1O00168 92 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 SPRY3O43610 288 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 FOXH1O75593 365 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms