RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 KCNK15Q9H427 330 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 DZANK1Q9NVP4 752 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 MRPS28Q9Y2Q9 187 aaKnown RBP9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 A0A1W2PPV9 198 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 ANKRD20A5PA0PJZ0 165 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 RFPL4AA6NLU0 287 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 NPIPA2E9PIF3 369 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 RFPL4AL1F8VTS6 287 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 NPIPA3F8WFD2 350 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 CISD3P0C7P0 127 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 PSMB6P28072 239 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 CD80P33681 288 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 EEF1A1P68104 462 aaKnown RBP9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 FUT5Q11128 374 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 PAN3Q58A45 887 aaKnown RBP9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 LRRTM1Q86UE6 522 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 SLC22A24Q8N4F4 322 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 FAM181AQ8N9Y4 354 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 LCORQ96JN0 433 aaPredicted RBP9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 UBL7Q96S82 380 aaPredicted RBP9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 ZNF160Q9HCG1 818 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 MRPS2Q9Y399 296 aaKnown RBP9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 CCDC163A0A0D9SF12 145 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 RPS10-NUDT3A0A1W2PQS6 291 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 GABRA1P14867 456 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 CNR1P21554 472 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 RPS10P46783 165 aaKnown RBP9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 IAH1Q2TAA2 248 aaPredicted RBP9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 DEFB133Q30KQ1 61 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 TCEAL6Q6IPX3 200 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 FAM57BQ71RH2 274 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 RTL10Q7L3V2 364 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 MDGA2Q7Z553 956 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 RFLNBQ8N5W9 214 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 CCDC74AQ96AQ1 378 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 C20orf24Q9BUV8 137 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 EMC6Q9BV81 110 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 JAM3Q9BX67 310 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 DEFB126Q9BYW3 111 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 OR11A1Q9GZK7 315 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 NXF5Q9H1B4 397 aaKnown RBP9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 SCPEP1Q9HB40 452 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 ZFP64Q9NPA5 681 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 RPH3AQ9Y2J0 694 aaPredicted RBP9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 PUS1Q9Y606 427 aaKnown RBP eCLIP9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 BRCA1P38398 1863 aaKnown RBP9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 A0A087WUJ7 227 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 PRAMEF26H0Y7S4 382 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 ZGLP1P0C6A0 271 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 POU3F2P20265 443 aaPredicted RBP9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 CDKN2AP42771 156 aaKnown RBP9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 RPL27P61353 136 aaKnown RBP9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 DMRTC1Q5HYR2 192 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 TMEM71Q6P5X7 295 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 TMEM65Q6PI78 240 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 ZAR1Q86SH2 424 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 FAM160A2Q8N612 972 aaPredicted RBP9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 ZNF578Q96N58 590 aaPredicted RBP9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 MCOLN1Q9GZU1 580 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 C1orf198Q9H425 327 aa9.29□□□□□ -0.92
SMARCC2-209ENST00000550164 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.28□□□□□ -0.92
SMARCC2-209ENST00000550164 SLC17A2O00624 439 aa9.28□□□□□ -0.92
SMARCC2-209ENST00000550164 TNFSF12O43508 249 aa9.28□□□□□ -0.92
SMARCC2-209ENST00000550164 ATG12O94817 140 aa9.28□□□□□ -0.92
SMARCC2-209ENST00000550164 CT62P0C5K7 136 aa9.28□□□□□ -0.92
SMARCC2-209ENST00000550164 GLI4P10075 376 aa9.28□□□□□ -0.92
SMARCC2-209ENST00000550164 BLVRBP30043 206 aaPredicted RBP9.28□□□□□ -0.92
SMARCC2-209ENST00000550164 HRH1P35367 487 aa9.28□□□□□ -0.92
SMARCC2-209ENST00000550164 ZIC1Q15915 447 aa9.28□□□□□ -0.92
SMARCC2-209ENST00000550164 ZNF674Q2M3X9 581 aa9.28□□□□□ -0.92
SMARCC2-209ENST00000550164 LAMTOR1Q6IAA8 161 aa9.28□□□□□ -0.92
SMARCC2-209ENST00000550164 MRM1Q6IN84 353 aaKnown RBP9.28□□□□□ -0.92
SMARCC2-209ENST00000550164 ADAM5Q6NVV9 412 aa9.28□□□□□ -0.92
SMARCC2-209ENST00000550164 P4HA3Q7Z4N8 544 aa9.28□□□□□ -0.92
SMARCC2-209ENST00000550164 BAP18Q8IXM2 172 aa9.28□□□□□ -0.92
SMARCC2-209ENST00000550164 TEX19Q8NA77 164 aa9.28□□□□□ -0.92
SMARCC2-209ENST00000550164 BPIFCQ8NFQ6 507 aa9.28□□□□□ -0.92
SMARCC2-209ENST00000550164 BAHD1Q8TBE0 780 aaPredicted RBP9.28□□□□□ -0.92
SMARCC2-209ENST00000550164 MARCH1Q8TCQ1 289 aa9.28□□□□□ -0.92
SMARCC2-209ENST00000550164 LHX9Q9NQ69 397 aa9.28□□□□□ -0.92
SMARCC2-209ENST00000550164 NIT2Q9NQR4 276 aa9.28□□□□□ -0.92
SMARCC2-209ENST00000550164 OPN4Q9UHM6 478 aa9.28□□□□□ -0.92
SMARCC2-209ENST00000550164 PCDHB10Q9UN67 800 aa9.28□□□□□ -0.92
SMARCC2-209ENST00000550164 OGG1O15527 345 aa9.28□□□□□ -0.92
SMARCC2-209ENST00000550164 IGF2P01344 180 aa9.28□□□□□ -0.92
SMARCC2-209ENST00000550164 HLA-DQB1P01920 261 aa9.28□□□□□ -0.92
SMARCC2-209ENST00000550164 MYOGP15173 224 aa9.28□□□□□ -0.92
SMARCC2-209ENST00000550164 MESP2Q0VG99 397 aa9.28□□□□□ -0.92
SMARCC2-209ENST00000550164 SLC17A1Q14916 467 aa9.28□□□□□ -0.92
SMARCC2-209ENST00000550164 SGCBQ16585 318 aa9.28□□□□□ -0.92
SMARCC2-209ENST00000550164 B3GNTL1Q67FW5 361 aaPredicted RBP9.28□□□□□ -0.92
SMARCC2-209ENST00000550164 OR52W1Q6IF63 320 aa9.28□□□□□ -0.92
SMARCC2-209ENST00000550164 GLIPR1L1Q6UWM5 242 aa9.28□□□□□ -0.92
SMARCC2-209ENST00000550164 ANKRD33Q7Z3H0 272 aa9.28□□□□□ -0.92
SMARCC2-209ENST00000550164 OR13H1Q8NG92 308 aa9.28□□□□□ -0.92
SMARCC2-209ENST00000550164 LHFPL5Q8TAF8 219 aa9.28□□□□□ -0.92
SMARCC2-209ENST00000550164 COX14Q96I36 57 aa9.28□□□□□ -0.92
SMARCC2-209ENST00000550164 CMTM3Q96MX0 182 aa9.28□□□□□ -0.92
SMARCC2-209ENST00000550164 RALGAPA2Q2PPJ7 1873 aa9.28□□□□□ -0.92
SMARCC2-209ENST00000550164 TMEM229AB2RXF0 380 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms